protein ubiquitination
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 200 |
| AciI | CCGC | 3 cut(s) | 78, 103, 152 |
| AclWI | GGATC | 1 cut(s) | 366 |
| AcvI | CACGTG | 1 cut(s) | 298 |
| AflIII | ACRYGT | 1 cut(s) | 295 |
| AgsI | TTSAA | 1 cut(s) | 44 |
| AjiI | CACGTC | 1 cut(s) | 218 |
| AluBI | AGCT | 1 cut(s) | 161 |
| AluI | AGCT | 1 cut(s) | 161 |
| AlwI | GGATC | 1 cut(s) | 366 |
| ApeKI | GCWGC | 1 cut(s) | 71 |
| ArsI | GACNNNNNNTTYG | 1 cut(s) | 386 |
| AspLEI | GCGC | 1 cut(s) | 102 |
| AspS9I | GGNCC | 1 cut(s) | 394 |
| AvaII | GGWCC | 1 cut(s) | 394 |
| BbrPI | CACGTG | 1 cut(s) | 298 |
| BbvI | GCAGC | 1 cut(s) | 83 |
| BccI | CCATC | 2 cut(s) | 257, 337 |
| BceAI | ACGGC | 2 cut(s) | 193, 201 |
| BciVI | GTATCC | 1 cut(s) | 295 |
| BfuI | GTATCC | 1 cut(s) | 295 |
| BisI | GCNGC | 2 cut(s) | 72, 103 |
| BlsI | GCNGC | 2 cut(s) | 73, 104 |
| Bme18I | GGWCC | 1 cut(s) | 394 |
| BmgBI | CACGTC | 1 cut(s) | 218 |
| BmgT120I | GGNCC | 1 cut(s) | 394 |
| BmsI | GCATC | 2 cut(s) | 192, 301 |
| BsaAI | YACGTR | 1 cut(s) | 298 |
| BsaBI | GATNNNNATC | 1 cut(s) | 12 |
| Bse8I | GATNNNNATC | 1 cut(s) | 12 |
| BseGI | GGATG | 2 cut(s) | 40, 313 |
| BseJI | GATNNNNATC | 1 cut(s) | 12 |
| BseXI | GCAGC | 1 cut(s) | 83 |
| Bsh1236I | CGCG | 1 cut(s) | 200 |
| BslFI | GGGAC | 1 cut(s) | 228 |
| BsmFI | GGGAC | 1 cut(s) | 228 |
| Bsp143I | GATC | 2 cut(s) | 166, 371 |
| BspACI | CCGC | 3 cut(s) | 78, 103, 152 |
| BspFNI | CGCG | 1 cut(s) | 200 |
| BspPI | GGATC | 1 cut(s) | 366 |
| BspQI | GCTCTTC | 1 cut(s) | 195 |
| BssMI | GATC | 2 cut(s) | 166, 371 |
| Bst4CI | ACNGT | 1 cut(s) | 260 |
| Bst6I | CTCTTC | 1 cut(s) | 195 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 68 |
| BstBAI | YACGTR | 1 cut(s) | 298 |
| BstF5I | GGATG | 2 cut(s) | 40, 313 |
| BstFNI | CGCG | 1 cut(s) | 200 |
| BstHHI | GCGC | 1 cut(s) | 102 |
| BstKTI | GATC | 2 cut(s) | 169, 374 |
| BstMBI | GATC | 2 cut(s) | 166, 371 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 68, 77, 158 |
| BstUI | CGCG | 1 cut(s) | 200 |
| BstV1I | GCAGC | 1 cut(s) | 83 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 404 |
| BsuI | GTATCC | 1 cut(s) | 295 |
| BtgZI | GCGATG | 1 cut(s) | 215 |
| BtrI | CACGTC | 1 cut(s) | 218 |
| BtsCI | GGATG | 2 cut(s) | 40, 313 |
| CfoI | GCGC | 1 cut(s) | 102 |
| Cfr13I | GGNCC | 1 cut(s) | 394 |
| CviAII | CATG | 1 cut(s) | 181 |
| CviJI | RGCY | 4 cut(s) | 119, 161, 188, 287 |
| CviKI_1 | RGCY | 4 cut(s) | 119, 161, 188, 287 |
| DpnI | GATC | 2 cut(s) | 168, 373 |
| DpnII | GATC | 2 cut(s) | 166, 371 |
| Eam1104I | CTCTTC | 1 cut(s) | 195 |
| EarI | CTCTTC | 1 cut(s) | 195 |
| Eco47I | GGWCC | 1 cut(s) | 394 |
| Eco72I | CACGTG | 1 cut(s) | 298 |
| FaeI | CATG | 1 cut(s) | 184 |
| FaiI | YATR | 6 cut(s) | 182, 251, 270, 290, 320, 335 |
| FaqI | GGGAC | 1 cut(s) | 228 |
| FatI | CATG | 1 cut(s) | 180 |
| Fnu4HI | GCNGC | 2 cut(s) | 72, 103 |
| FokI | GGATG | 2 cut(s) | 47, 320 |
| Fsp4HI | GCNGC | 2 cut(s) | 72, 103 |
| GlaI | GCGC | 1 cut(s) | 101 |
| GluI | GCNGC | 2 cut(s) | 72, 103 |
| HhaI | GCGC | 1 cut(s) | 102 |
| Hin1II | CATG | 1 cut(s) | 184 |
| Hin6I | GCGC | 1 cut(s) | 100 |
| HinP1I | GCGC | 1 cut(s) | 100 |
| HincII | GTYRAC | 1 cut(s) | 22 |
| HindII | GTYRAC | 1 cut(s) | 22 |
| HinfI | GANTC | 2 cut(s) | 8, 23 |
| Hpy166II | GTNNAC | 1 cut(s) | 22 |
| Hpy188I | TCNGA | 2 cut(s) | 28, 394 |
| Hpy8I | GTNNAC | 1 cut(s) | 22 |
| Hpy99I | CGWCG | 1 cut(s) | 179 |
| HpyAV | CCTTC | 2 cut(s) | 38, 385 |
| HpyCH4III | ACNGT | 1 cut(s) | 260 |
| HpyCH4IV | ACGT | 2 cut(s) | 217, 297 |
| HpyCH4V | TGCA | 3 cut(s) | 62, 71, 333 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 68, 77, 158 |
| HpySE526I | ACGT | 2 cut(s) | 217, 297 |
| Hsp92II | CATG | 1 cut(s) | 184 |
| HspAI | GCGC | 1 cut(s) | 100 |
| Kzo9I | GATC | 2 cut(s) | 166, 371 |
| LguI | GCTCTTC | 1 cut(s) | 195 |
| LpnPI | CCDG | 5 cut(s) | 91, 191, 267, 269, 334 |
| Lsp1109I | GCAGC | 1 cut(s) | 83 |
| LweI | GCATC | 2 cut(s) | 192, 301 |
| MaeII | ACGT | 2 cut(s) | 217, 297 |
| MalI | GATC | 2 cut(s) | 168, 373 |
| MboI | GATC | 2 cut(s) | 166, 371 |
| MboII | GAAGA | 2 cut(s) | 182, 381 |
| MluCI | AATT | 2 cut(s) | 321, 383 |
| MlyI | GAGTC | 1 cut(s) | 17 |
| MmeI | TCCRAC | 1 cut(s) | 31 |
| MnlI | CCTC | 1 cut(s) | 109 |
| MseI | TTAA | 1 cut(s) | 135 |
| MvnI | CGCG | 1 cut(s) | 200 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 68, 77, 158 |
| NdeII | GATC | 2 cut(s) | 166, 371 |
| NlaIII | CATG | 1 cut(s) | 184 |
| PciSI | GCTCTTC | 1 cut(s) | 195 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 311 |
| PfeI | GAWTC | 1 cut(s) | 8 |
| PflFI | GACNNNGTC | 1 cut(s) | 219 |
| PkrI | GCNGC | 2 cut(s) | 73, 104 |
| PleI | GAGTC | 1 cut(s) | 17 |
| PmaCI | CACGTG | 1 cut(s) | 298 |
| PmlI | CACGTG | 1 cut(s) | 298 |
| PpsI | GAGTC | 1 cut(s) | 17 |
| Ppu21I | YACGTR | 1 cut(s) | 298 |
| PspCI | CACGTG | 1 cut(s) | 298 |
| PspPI | GGNCC | 1 cut(s) | 394 |
| PsyI | GACNNNGTC | 1 cut(s) | 219 |
| SapI | GCTCTTC | 1 cut(s) | 195 |
| SaqAI | TTAA | 1 cut(s) | 135 |
| SatI | GCNGC | 2 cut(s) | 72, 103 |
| Sau3AI | GATC | 2 cut(s) | 166, 371 |
| Sau96I | GGNCC | 1 cut(s) | 394 |
| SchI | GAGTC | 1 cut(s) | 17 |
| SetI | ASST | 4 cut(s) | 49, 163, 220, 300 |
| SfaNI | GCATC | 2 cut(s) | 192, 301 |
| SinI | GGWCC | 1 cut(s) | 394 |
| Sse9I | AATT | 2 cut(s) | 321, 383 |
| SsiI | CCGC | 3 cut(s) | 78, 103, 152 |
| TaaI | ACNGT | 1 cut(s) | 260 |
| TaiI | ACGT | 2 cut(s) | 220, 300 |
| TaqI | TCGA | 3 cut(s) | 145, 174, 370 |
| TasI | AATT | 2 cut(s) | 321, 383 |
| TauI | GCSGC | 1 cut(s) | 105 |
| TfiI | GAWTC | 1 cut(s) | 8 |
| Tru1I | TTAA | 1 cut(s) | 135 |
| Tru9I | TTAA | 1 cut(s) | 135 |
| TseI | GCWGC | 1 cut(s) | 71 |
| TspGWI | ACGGA | 1 cut(s) | 320 |
| Tth111I | GACNNNGTC | 1 cut(s) | 219 |
| VpaK11BI | GGWCC | 1 cut(s) | 394 |