protein ubiquitination
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| PGG | PF13962 | 184 - 295 | 7.3e-24 | Domain of unknown function |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 276, 701 |
| AciI | CCGC | 3 cut(s) | 486, 621, 873 |
| AclI | AACGTT | 1 cut(s) | 1036 |
| AclWI | GGATC | 1 cut(s) | 299 |
| AcoI | YGGCCR | 1 cut(s) | 921 |
| AcsI | RAATTY | 4 cut(s) | 316, 390, 493, 759 |
| AfaI | GTAC | 2 cut(s) | 434, 456 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 126 |
| AgeI | ACCGGT | 1 cut(s) | 656 |
| AgsI | TTSAA | 4 cut(s) | 499, 673, 796, 936 |
| AjiI | CACGTC | 1 cut(s) | 768 |
| AjnI | CCWGG | 2 cut(s) | 394, 637 |
| AluBI | AGCT | 3 cut(s) | 67, 146, 382 |
| AluI | AGCT | 3 cut(s) | 67, 146, 382 |
| Alw21I | GWGCWC | 1 cut(s) | 598 |
| Alw26I | GTCTC | 2 cut(s) | 440, 560 |
| AlwI | GGATC | 1 cut(s) | 299 |
| AoxI | GGCC | 1 cut(s) | 921 |
| ApeKI | GCWGC | 4 cut(s) | 346, 401, 415, 875 |
| ApoI | RAATTY | 4 cut(s) | 316, 390, 493, 759 |
| AsiGI | ACCGGT | 1 cut(s) | 656 |
| AsuHPI | GGTGA | 2 cut(s) | 500, 598 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 438, 471 |
| Bbv12I | GWGCWC | 1 cut(s) | 598 |
| BbvI | GCAGC | 4 cut(s) | 333, 413, 427, 862 |
| BccI | CCATC | 5 cut(s) | 257, 320, 379, 617, 932 |
| BceAI | ACGGC | 1 cut(s) | 585 |
| BciT130I | CCWGG | 2 cut(s) | 396, 639 |
| BcoDI | GTCTC | 2 cut(s) | 440, 560 |
| BfaI | CTAG | 2 cut(s) | 143, 980 |
| BisI | GCNGC | 5 cut(s) | 347, 402, 416, 621, 876 |
| BlsI | GCNGC | 5 cut(s) | 348, 403, 417, 622, 877 |
| Bme1390I | CCNGG | 2 cut(s) | 396, 639 |
| BmgBI | CACGTC | 1 cut(s) | 768 |
| BmrFI | CCNGG | 2 cut(s) | 396, 639 |
| BmsI | GCATC | 3 cut(s) | 402, 700, 954 |
| BpmI | CTGGAG | 1 cut(s) | 660 |
| BpuEI | CTTGAG | 1 cut(s) | 491 |
| BsaJI | CCNNGG | 1 cut(s) | 503 |
| BsaWI | WCCGGW | 1 cut(s) | 656 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 126 |
| Bse118I | RCCGGY | 1 cut(s) | 656 |
| Bse3DI | GCAATG | 1 cut(s) | 404 |
| BseBI | CCWGG | 2 cut(s) | 396, 639 |
| BseDI | CCNNGG | 1 cut(s) | 503 |
| BseGI | GGATG | 3 cut(s) | 564, 924, 969 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 126 |
| BseMI | GCAATG | 1 cut(s) | 404 |
| BseXI | GCAGC | 4 cut(s) | 333, 413, 427, 862 |
| BseYI | CCCAGC | 1 cut(s) | 356 |
| BsgI | GTGCAG | 2 cut(s) | 360, 420 |
| BshFI | GGCC | 1 cut(s) | 923 |
| BshTI | ACCGGT | 1 cut(s) | 656 |
| BsiHKAI | GWGCWC | 1 cut(s) | 598 |
| BsiSI | CCGG | 2 cut(s) | 657, 920 |
| BslFI | GGGAC | 1 cut(s) | 352 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 126 |
| BsmAI | GTCTC | 2 cut(s) | 440, 560 |
| BsmBI | CGTCTC | 1 cut(s) | 560 |
| BsmFI | GGGAC | 1 cut(s) | 352 |
| BsnI | GGCC | 1 cut(s) | 923 |
| Bsp1286I | GDGCHC | 1 cut(s) | 598 |
| Bsp143I | GATC | 1 cut(s) | 291 |
| BspACI | CCGC | 3 cut(s) | 486, 621, 873 |
| BspANI | GGCC | 1 cut(s) | 923 |
| BspPI | GGATC | 1 cut(s) | 299 |
| BsrDI | GCAATG | 1 cut(s) | 404 |
| BsrFI | RCCGGY | 1 cut(s) | 656 |
| BssAI | RCCGGY | 1 cut(s) | 656 |
| BssECI | CCNNGG | 1 cut(s) | 503 |
| BssMI | GATC | 1 cut(s) | 291 |
| BssT1I | CCWWGG | 1 cut(s) | 503 |
| Bst2UI | CCWGG | 2 cut(s) | 396, 639 |
| Bst4CI | ACNGT | 2 cut(s) | 530, 586 |
| Bst6I | CTCTTC | 1 cut(s) | 72 |
| BstDEI | CTNAG | 1 cut(s) | 462 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 124 |
| BstF5I | GGATG | 3 cut(s) | 564, 924, 969 |
| BstKTI | GATC | 1 cut(s) | 294 |
| BstMAI | GTCTC | 2 cut(s) | 440, 560 |
| BstMBI | GATC | 1 cut(s) | 291 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 320, 415, 872 |
| BstNI | CCWGG | 2 cut(s) | 396, 639 |
| BstNSI | RCATGY | 1 cut(s) | 346 |
| BstSCI | CCNGG | 2 cut(s) | 394, 637 |
| BstV1I | GCAGC | 4 cut(s) | 333, 413, 427, 862 |
| BstX2I | RGATCY | 1 cut(s) | 291 |
| BstYI | RGATCY | 1 cut(s) | 291 |
| BsuRI | GGCC | 1 cut(s) | 923 |
| BtrI | CACGTC | 1 cut(s) | 768 |
| BtsCI | GGATG | 3 cut(s) | 564, 924, 969 |
| BtsIMutI | CAGTG | 2 cut(s) | 535, 582 |
| Cfr10I | RCCGGY | 1 cut(s) | 656 |
| Csp6I | GTAC | 2 cut(s) | 433, 455 |
| CspAI | ACCGGT | 1 cut(s) | 656 |
| CviAII | CATG | 5 cut(s) | 41, 343, 613, 677, 856 |
| CviJI | RGCY | 6 cut(s) | 67, 146, 323, 382, 845, 923 |
| CviKI_1 | RGCY | 6 cut(s) | 67, 146, 323, 382, 845, 923 |
| CviQI | GTAC | 2 cut(s) | 433, 455 |
| DdeI | CTNAG | 1 cut(s) | 462 |
| DpnI | GATC | 1 cut(s) | 293 |
| DpnII | GATC | 1 cut(s) | 291 |
| DraI | TTTAAA | 1 cut(s) | 63 |
| EaeI | YGGCCR | 1 cut(s) | 921 |
| Eam1104I | CTCTTC | 1 cut(s) | 72 |
| EarI | CTCTTC | 1 cut(s) | 72 |
| Eco130I | CCWWGG | 1 cut(s) | 503 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 124 |
| EcoRI | GAATTC | 1 cut(s) | 759 |
| EcoRII | CCWGG | 2 cut(s) | 394, 637 |
| EcoT14I | CCWWGG | 1 cut(s) | 503 |
| ErhI | CCWWGG | 1 cut(s) | 503 |
| Esp3I | CGTCTC | 1 cut(s) | 560 |
| FaeI | CATG | 5 cut(s) | 44, 346, 616, 680, 859 |
| FaqI | GGGAC | 1 cut(s) | 352 |
| FatI | CATG | 5 cut(s) | 40, 342, 612, 676, 855 |
| FauNDI | CATATG | 1 cut(s) | 180 |
| Fnu4HI | GCNGC | 5 cut(s) | 347, 402, 416, 621, 876 |
| FokI | GGATG | 3 cut(s) | 571, 911, 976 |
| Fsp4HI | GCNGC | 5 cut(s) | 347, 402, 416, 621, 876 |
| FspBI | CTAG | 2 cut(s) | 143, 980 |
| GluI | GCNGC | 5 cut(s) | 347, 402, 416, 621, 876 |
| GsaI | CCCAGC | 1 cut(s) | 360 |
| GsuI | CTGGAG | 1 cut(s) | 660 |
| HaeIII | GGCC | 1 cut(s) | 923 |
| HapII | CCGG | 2 cut(s) | 657, 920 |
| Hin1II | CATG | 5 cut(s) | 44, 346, 616, 680, 859 |
| HincII | GTYRAC | 1 cut(s) | 46 |
| HindII | GTYRAC | 1 cut(s) | 46 |
| HinfI | GANTC | 4 cut(s) | 9, 305, 523, 916 |
| HpaII | CCGG | 2 cut(s) | 657, 920 |
| HphI | GGTGA | 2 cut(s) | 500, 598 |
| Hpy166II | GTNNAC | 3 cut(s) | 46, 422, 899 |
| Hpy188I | TCNGA | 3 cut(s) | 207, 709, 758 |
| Hpy188III | TCNNGA | 4 cut(s) | 197, 263, 470, 793 |
| Hpy8I | GTNNAC | 3 cut(s) | 46, 422, 899 |
| HpyAV | CCTTC | 4 cut(s) | 148, 539, 890, 938 |
| HpyCH4III | ACNGT | 2 cut(s) | 530, 586 |
| HpyCH4IV | ACGT | 6 cut(s) | 162, 243, 749, 767, 772, 1036 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 320, 415, 872 |
| HpyF3I | CTNAG | 1 cut(s) | 462 |
| HpySE526I | ACGT | 6 cut(s) | 162, 243, 749, 767, 772, 1036 |
| Hsp92II | CATG | 5 cut(s) | 44, 346, 616, 680, 859 |
| Kzo9I | GATC | 1 cut(s) | 291 |
| Lsp1109I | GCAGC | 4 cut(s) | 333, 413, 427, 862 |
| LweI | GCATC | 3 cut(s) | 402, 700, 954 |
| MaeI | CTAG | 2 cut(s) | 143, 980 |
| MaeII | ACGT | 6 cut(s) | 162, 243, 749, 767, 772, 1036 |
| MaeIII | GTNAC | 3 cut(s) | 172, 768, 946 |
| MalI | GATC | 1 cut(s) | 293 |
| MboI | GATC | 1 cut(s) | 291 |
| MboII | GAAGA | 5 cut(s) | 43, 89, 130, 720, 794 |
| MflI | RGATCY | 1 cut(s) | 291 |
| MhlI | GDGCHC | 1 cut(s) | 598 |
| MlyI | GAGTC | 1 cut(s) | 299 |
| MnlI | CCTC | 5 cut(s) | 120, 130, 468, 635, 986 |
| MseI | TTAA | 3 cut(s) | 62, 384, 1020 |
| MslI | CAYNNNNRTG | 1 cut(s) | 611 |
| MspA1I | CMGCKG | 2 cut(s) | 486, 875 |
| MspI | CCGG | 2 cut(s) | 657, 920 |
| MspR9I | CCNGG | 2 cut(s) | 396, 639 |
| MvaI | CCWGG | 2 cut(s) | 396, 639 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 320, 415, 872 |
| NdeI | CATATG | 1 cut(s) | 180 |
| NdeII | GATC | 1 cut(s) | 291 |
| NlaIII | CATG | 5 cut(s) | 44, 346, 616, 680, 859 |
| NmuCI | GTSAC | 2 cut(s) | 768, 946 |
| NspI | RCATGY | 1 cut(s) | 346 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 249 |
| PfeI | GAWTC | 3 cut(s) | 9, 523, 916 |
| PfoI | TCCNGGA | 1 cut(s) | 637 |
| PinAI | ACCGGT | 1 cut(s) | 656 |
| PkrI | GCNGC | 5 cut(s) | 348, 403, 417, 622, 877 |
| PleI | GAGTC | 1 cut(s) | 299 |
| PpsI | GAGTC | 1 cut(s) | 299 |
| PsiI | TTATAA | 2 cut(s) | 276, 701 |
| Psp1406I | AACGTT | 1 cut(s) | 1036 |
| Psp6I | CCWGG | 2 cut(s) | 394, 637 |
| PspFI | CCCAGC | 1 cut(s) | 356 |
| PspGI | CCWGG | 2 cut(s) | 394, 637 |
| PsuI | RGATCY | 1 cut(s) | 291 |
| RsaI | GTAC | 2 cut(s) | 434, 456 |
| RsaNI | GTAC | 2 cut(s) | 433, 455 |
| RseI | CAYNNNNRTG | 1 cut(s) | 611 |
| SaqAI | TTAA | 3 cut(s) | 62, 384, 1020 |
| SatI | GCNGC | 5 cut(s) | 347, 402, 416, 621, 876 |
| Sau3AI | GATC | 1 cut(s) | 291 |
| SchI | GAGTC | 1 cut(s) | 299 |
| ScrFI | CCNGG | 2 cut(s) | 396, 639 |
| SduI | GDGCHC | 1 cut(s) | 598 |
| SfaNI | GCATC | 3 cut(s) | 402, 700, 954 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 611 |
| SmlI | CTYRAG | 1 cut(s) | 470 |
| SmoI | CTYRAG | 1 cut(s) | 470 |
| SsiI | CCGC | 3 cut(s) | 486, 621, 873 |
| SspI | AATATT | 1 cut(s) | 1017 |
| SspMI | CTAG | 2 cut(s) | 143, 980 |
| StyD4I | CCNGG | 2 cut(s) | 394, 637 |
| StyI | CCWWGG | 1 cut(s) | 503 |
| TaaI | ACNGT | 2 cut(s) | 530, 586 |
| TaiI | ACGT | 6 cut(s) | 165, 246, 752, 770, 775, 1039 |
| TaqI | TCGA | 2 cut(s) | 96, 252 |
| TauI | GCSGC | 1 cut(s) | 623 |
| TfiI | GAWTC | 3 cut(s) | 9, 523, 916 |
| Tru1I | TTAA | 3 cut(s) | 62, 384, 1020 |
| Tru9I | TTAA | 3 cut(s) | 62, 384, 1020 |
| TscAI | CASTG | 2 cut(s) | 535, 589 |
| TseFI | GTSAC | 2 cut(s) | 768, 946 |
| TseI | GCWGC | 4 cut(s) | 346, 401, 415, 875 |
| Tsp45I | GTSAC | 2 cut(s) | 768, 946 |
| TspDTI | ATGAA | 6 cut(s) | 17, 39, 44, 494, 575, 693 |
| TspGWI | ACGGA | 1 cut(s) | 1020 |
| TspRI | CASTG | 2 cut(s) | 535, 589 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 124 |
| XapI | RAATTY | 4 cut(s) | 316, 390, 493, 759 |
| XceI | RCATGY | 1 cut(s) | 346 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 838 |
| XspI | CTAG | 2 cut(s) | 143, 980 |