protein ubiquitination
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| PGG | PF13962 | 85 - 197 | 3.7e-22 | Domain of unknown function |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 155 |
| AcsI | RAATTY | 2 cut(s) | 462, 500 |
| AfaI | GTAC | 2 cut(s) | 283, 436 |
| AgsI | TTSAA | 3 cut(s) | 98, 139, 485 |
| AjnI | CCWGG | 1 cut(s) | 337 |
| AluBI | AGCT | 1 cut(s) | 107 |
| AluI | AGCT | 1 cut(s) | 107 |
| AlwI | GGATC | 1 cut(s) | 155 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 338 |
| AoxI | GGCC | 1 cut(s) | 526 |
| ApeKI | GCWGC | 2 cut(s) | 104, 631 |
| ApoI | RAATTY | 2 cut(s) | 462, 500 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 492 |
| AsuHPI | GGTGA | 3 cut(s) | 298, 526, 547 |
| BbsI | GAAGAC | 1 cut(s) | 356 |
| BbvI | GCAGC | 2 cut(s) | 116, 618 |
| BccI | CCATC | 1 cut(s) | 593 |
| BciT130I | CCWGG | 1 cut(s) | 339 |
| BclI | TGATCA | 1 cut(s) | 88 |
| BisI | GCNGC | 2 cut(s) | 105, 632 |
| BlsI | GCNGC | 2 cut(s) | 106, 633 |
| Bme1390I | CCNGG | 1 cut(s) | 339 |
| BmiI | GGNNCC | 1 cut(s) | 731 |
| BmrFI | CCNGG | 1 cut(s) | 339 |
| BmsI | GCATC | 3 cut(s) | 283, 403, 657 |
| BpiI | GAAGAC | 1 cut(s) | 356 |
| BsaJI | CCNNGG | 1 cut(s) | 165 |
| Bse1I | ACTGG | 2 cut(s) | 639, 647 |
| Bse3DI | GCAATG | 1 cut(s) | 677 |
| BseBI | CCWGG | 1 cut(s) | 339 |
| BseDI | CCNNGG | 1 cut(s) | 165 |
| BseGI | GGATG | 1 cut(s) | 672 |
| BseMI | GCAATG | 1 cut(s) | 677 |
| BseNI | ACTGG | 2 cut(s) | 639, 647 |
| BseXI | GCAGC | 2 cut(s) | 116, 618 |
| BsgI | GTGCAG | 1 cut(s) | 123 |
| BshFI | GGCC | 1 cut(s) | 528 |
| BsmI | GAATGC | 1 cut(s) | 326 |
| BsnI | GGCC | 1 cut(s) | 528 |
| Bsp1407I | TGTACA | 2 cut(s) | 281, 434 |
| Bsp143I | GATC | 2 cut(s) | 88, 160 |
| BspANI | GGCC | 1 cut(s) | 528 |
| BspLI | GGNNCC | 1 cut(s) | 731 |
| BspPI | GGATC | 1 cut(s) | 155 |
| BsrDI | GCAATG | 1 cut(s) | 677 |
| BsrGI | TGTACA | 2 cut(s) | 281, 434 |
| BsrI | ACTGG | 2 cut(s) | 639, 647 |
| BssECI | CCNNGG | 1 cut(s) | 165 |
| BssMI | GATC | 2 cut(s) | 88, 160 |
| BssT1I | CCWWGG | 1 cut(s) | 165 |
| Bst2UI | CCWGG | 1 cut(s) | 339 |
| Bst4CI | ACNGT | 4 cut(s) | 58, 286, 334, 616 |
| Bst6I | CTCTTC | 1 cut(s) | 113 |
| BstAUI | TGTACA | 2 cut(s) | 281, 434 |
| BstC8I | GCNNGC | 3 cut(s) | 526, 629, 636 |
| BstF5I | GGATG | 1 cut(s) | 672 |
| BstKTI | GATC | 2 cut(s) | 91, 163 |
| BstMBI | GATC | 2 cut(s) | 88, 160 |
| BstNI | CCWGG | 1 cut(s) | 339 |
| BstNSI | RCATGY | 1 cut(s) | 631 |
| BstSCI | CCNGG | 1 cut(s) | 337 |
| BstV1I | GCAGC | 2 cut(s) | 116, 618 |
| BstV2I | GAAGAC | 1 cut(s) | 356 |
| BstX2I | RGATCY | 1 cut(s) | 160 |
| BstYI | RGATCY | 1 cut(s) | 160 |
| BsuRI | GGCC | 1 cut(s) | 528 |
| BtsCI | GGATG | 1 cut(s) | 672 |
| BtsIMutI | CAGTG | 1 cut(s) | 646 |
| Cac8I | GCNNGC | 3 cut(s) | 526, 629, 636 |
| CaiI | CAGNNNCTG | 1 cut(s) | 338 |
| Csp6I | GTAC | 2 cut(s) | 282, 435 |
| CviAII | CATG | 3 cut(s) | 451, 559, 628 |
| CviJI | RGCY | 2 cut(s) | 107, 528 |
| CviKI_1 | RGCY | 2 cut(s) | 107, 528 |
| CviQI | GTAC | 2 cut(s) | 282, 435 |
| DpnI | GATC | 2 cut(s) | 90, 162 |
| DpnII | GATC | 2 cut(s) | 88, 160 |
| Eam1104I | CTCTTC | 1 cut(s) | 113 |
| EarI | CTCTTC | 1 cut(s) | 113 |
| Eco130I | CCWWGG | 1 cut(s) | 165 |
| Eco147I | AGGCCT | 1 cut(s) | 528 |
| EcoRI | GAATTC | 1 cut(s) | 462 |
| EcoRII | CCWGG | 1 cut(s) | 337 |
| EcoT14I | CCWWGG | 1 cut(s) | 165 |
| ErhI | CCWWGG | 1 cut(s) | 165 |
| FaeI | CATG | 3 cut(s) | 454, 562, 631 |
| FatI | CATG | 3 cut(s) | 450, 558, 627 |
| FauNDI | CATATG | 1 cut(s) | 662 |
| FbaI | TGATCA | 1 cut(s) | 88 |
| Fnu4HI | GCNGC | 2 cut(s) | 105, 632 |
| FokI | GGATG | 1 cut(s) | 679 |
| Fsp4HI | GCNGC | 2 cut(s) | 105, 632 |
| GluI | GCNGC | 2 cut(s) | 105, 632 |
| HaeIII | GGCC | 1 cut(s) | 528 |
| Hin1II | CATG | 3 cut(s) | 454, 562, 631 |
| HinfI | GANTC | 2 cut(s) | 176, 223 |
| HphI | GGTGA | 3 cut(s) | 298, 526, 547 |
| Hpy166II | GTNNAC | 1 cut(s) | 184 |
| Hpy188I | TCNGA | 1 cut(s) | 412 |
| Hpy8I | GTNNAC | 1 cut(s) | 184 |
| HpyAV | CCTTC | 1 cut(s) | 256 |
| HpyCH4III | ACNGT | 4 cut(s) | 58, 286, 334, 616 |
| HpyCH4IV | ACGT | 1 cut(s) | 475 |
| HpyCH4V | TGCA | 5 cut(s) | 104, 112, 416, 424, 670 |
| HpySE526I | ACGT | 1 cut(s) | 475 |
| Hsp92II | CATG | 3 cut(s) | 454, 562, 631 |
| Ksp22I | TGATCA | 1 cut(s) | 88 |
| Kzo9I | GATC | 2 cut(s) | 88, 160 |
| LpnPI | CCDG | 6 cut(s) | 324, 345, 351, 510, 652, 660 |
| Lsp1109I | GCAGC | 2 cut(s) | 116, 618 |
| LweI | GCATC | 3 cut(s) | 283, 403, 657 |
| MaeII | ACGT | 1 cut(s) | 475 |
| MaeIII | GTNAC | 5 cut(s) | 58, 78, 304, 553, 649 |
| MalI | GATC | 2 cut(s) | 90, 162 |
| MboI | GATC | 2 cut(s) | 88, 160 |
| MboII | GAAGA | 4 cut(s) | 130, 356, 497, 500 |
| MflI | RGATCY | 1 cut(s) | 160 |
| MluCI | AATT | 6 cut(s) | 66, 84, 233, 462, 500, 671 |
| MnlI | CCTC | 5 cut(s) | 10, 136, 238, 548, 664 |
| MroXI | GAANNNNTTC | 1 cut(s) | 492 |
| MseI | TTAA | 1 cut(s) | 377 |
| MslI | CAYNNNNRTG | 3 cut(s) | 311, 560, 665 |
| MspR9I | CCNGG | 1 cut(s) | 339 |
| Mva1269I | GAATGC | 1 cut(s) | 326 |
| MvaI | CCWGG | 1 cut(s) | 339 |
| NdeI | CATATG | 1 cut(s) | 662 |
| NdeII | GATC | 2 cut(s) | 88, 160 |
| NlaIII | CATG | 3 cut(s) | 454, 562, 631 |
| NlaIV | GGNNCC | 1 cut(s) | 731 |
| NmuCI | GTSAC | 3 cut(s) | 78, 304, 553 |
| NspI | RCATGY | 1 cut(s) | 631 |
| PaeI | GCATGC | 1 cut(s) | 631 |
| PceI | AGGCCT | 1 cut(s) | 528 |
| PctI | GAATGC | 1 cut(s) | 326 |
| PdmI | GAANNNNTTC | 1 cut(s) | 492 |
| PfeI | GAWTC | 2 cut(s) | 176, 223 |
| PkrI | GCNGC | 2 cut(s) | 106, 633 |
| Psp6I | CCWGG | 1 cut(s) | 337 |
| PspGI | CCWGG | 1 cut(s) | 337 |
| PspN4I | GGNNCC | 1 cut(s) | 731 |
| PstNI | CAGNNNCTG | 1 cut(s) | 338 |
| PsuI | RGATCY | 1 cut(s) | 160 |
| RsaI | GTAC | 2 cut(s) | 283, 436 |
| RsaNI | GTAC | 2 cut(s) | 282, 435 |
| RseI | CAYNNNNRTG | 3 cut(s) | 311, 560, 665 |
| SaqAI | TTAA | 1 cut(s) | 377 |
| SatI | GCNGC | 2 cut(s) | 105, 632 |
| Sau3AI | GATC | 2 cut(s) | 88, 160 |
| ScrFI | CCNGG | 1 cut(s) | 339 |
| SetI | ASST | 7 cut(s) | 103, 109, 147, 364, 390, 478, 656 |
| SfaNI | GCATC | 3 cut(s) | 283, 403, 657 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 311, 560, 665 |
| SphI | GCATGC | 1 cut(s) | 631 |
| Sse9I | AATT | 6 cut(s) | 66, 84, 233, 462, 500, 671 |
| SseBI | AGGCCT | 1 cut(s) | 528 |
| SspI | AATATT | 1 cut(s) | 720 |
| StuI | AGGCCT | 1 cut(s) | 528 |
| StyD4I | CCNGG | 1 cut(s) | 337 |
| StyI | CCWWGG | 1 cut(s) | 165 |
| TaaI | ACNGT | 4 cut(s) | 58, 286, 334, 616 |
| TaiI | ACGT | 1 cut(s) | 478 |
| TaqI | TCGA | 1 cut(s) | 611 |
| TasI | AATT | 6 cut(s) | 66, 84, 233, 462, 500, 671 |
| TatI | WGTACW | 2 cut(s) | 281, 434 |
| TfiI | GAWTC | 2 cut(s) | 176, 223 |
| Tru1I | TTAA | 1 cut(s) | 377 |
| Tru9I | TTAA | 1 cut(s) | 377 |
| TscAI | CASTG | 1 cut(s) | 646 |
| TseFI | GTSAC | 3 cut(s) | 78, 304, 553 |
| TseI | GCWGC | 2 cut(s) | 104, 631 |
| Tsp45I | GTSAC | 3 cut(s) | 78, 304, 553 |
| TspDTI | ATGAA | 6 cut(s) | 17, 131, 275, 366, 649, 685 |
| TspGWI | ACGGA | 1 cut(s) | 233 |
| TspRI | CASTG | 1 cut(s) | 646 |
| XapI | RAATTY | 2 cut(s) | 462, 500 |
| XceI | RCATGY | 1 cut(s) | 631 |
| XmnI | GAANNNNTTC | 1 cut(s) | 492 |