protein ubiquitination
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 635 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 26 |
| AccI | GTMKAC | 1 cut(s) | 222 |
| AciI | CCGC | 1 cut(s) | 587 |
| AclI | AACGTT | 1 cut(s) | 234 |
| AclWI | GGATC | 2 cut(s) | 19, 106 |
| AcoI | YGGCCR | 1 cut(s) | 147 |
| AcsI | RAATTY | 1 cut(s) | 923 |
| AcyI | GRCGYC | 2 cut(s) | 189, 632 |
| AfaI | GTAC | 4 cut(s) | 39, 547, 552, 938 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 26, 145 |
| AgsI | TTSAA | 4 cut(s) | 50, 508, 790, 928 |
| AluBI | AGCT | 4 cut(s) | 109, 218, 476, 496 |
| AluI | AGCT | 4 cut(s) | 109, 218, 476, 496 |
| Alw21I | GWGCWC | 2 cut(s) | 287, 562 |
| Alw26I | GTCTC | 2 cut(s) | 367, 444 |
| AlwI | GGATC | 2 cut(s) | 19, 106 |
| AoxI | GGCC | 2 cut(s) | 147, 718 |
| ApeKI | GCWGC | 4 cut(s) | 418, 428, 473, 584 |
| ApoI | RAATTY | 1 cut(s) | 923 |
| AspS9I | GGNCC | 1 cut(s) | 303 |
| AsuC2I | CCSGG | 1 cut(s) | 468 |
| AvaII | GGWCC | 1 cut(s) | 303 |
| BbsI | GAAGAC | 1 cut(s) | 684 |
| Bbv12I | GWGCWC | 2 cut(s) | 287, 562 |
| BbvI | GCAGC | 4 cut(s) | 405, 415, 485, 571 |
| BccI | CCATC | 3 cut(s) | 147, 427, 824 |
| BceAI | ACGGC | 2 cut(s) | 162, 467 |
| BclI | TGATCA | 1 cut(s) | 156 |
| BcnI | CCSGG | 1 cut(s) | 468 |
| BcoDI | GTCTC | 2 cut(s) | 367, 444 |
| BfaI | CTAG | 2 cut(s) | 71, 722 |
| BfmI | CTRYAG | 1 cut(s) | 346 |
| BisI | GCNGC | 5 cut(s) | 419, 429, 474, 585, 588 |
| BlsI | GCNGC | 5 cut(s) | 420, 430, 475, 586, 589 |
| Bme1390I | CCNGG | 1 cut(s) | 468 |
| Bme18I | GGWCC | 1 cut(s) | 303 |
| BmgT120I | GGNCC | 1 cut(s) | 303 |
| BmiI | GGNNCC | 2 cut(s) | 85, 305 |
| BmrFI | CCNGG | 1 cut(s) | 468 |
| BmrI | ACTGGG | 1 cut(s) | 563 |
| BmsI | GCATC | 2 cut(s) | 160, 595 |
| BmuI | ACTGGG | 1 cut(s) | 563 |
| BpiI | GAAGAC | 1 cut(s) | 684 |
| BpuMI | CCSGG | 1 cut(s) | 468 |
| BsaHI | GRCGYC | 2 cut(s) | 189, 632 |
| BsaJI | CCNNGG | 3 cut(s) | 192, 226, 467 |
| BsaWI | WCCGGW | 1 cut(s) | 838 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 26, 145 |
| Bse1I | ACTGG | 2 cut(s) | 60, 558 |
| Bse3DI | GCAATG | 1 cut(s) | 380 |
| BseDI | CCNNGG | 3 cut(s) | 192, 226, 467 |
| BseGI | GGATG | 3 cut(s) | 528, 810, 864 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 26, 145 |
| BseMI | GCAATG | 1 cut(s) | 380 |
| BseNI | ACTGG | 2 cut(s) | 60, 558 |
| BseXI | GCAGC | 4 cut(s) | 405, 415, 485, 571 |
| BshFI | GGCC | 2 cut(s) | 149, 720 |
| BsiHKAI | GWGCWC | 2 cut(s) | 287, 562 |
| BsiSI | CCGG | 2 cut(s) | 467, 839 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 26, 145 |
| BsmAI | GTCTC | 2 cut(s) | 367, 444 |
| BsnI | GGCC | 2 cut(s) | 149, 720 |
| Bsp1286I | GDGCHC | 2 cut(s) | 287, 562 |
| Bsp1407I | TGTACA | 1 cut(s) | 37 |
| Bsp143I | GATC | 4 cut(s) | 11, 22, 111, 156 |
| BspACI | CCGC | 1 cut(s) | 587 |
| BspANI | GGCC | 2 cut(s) | 149, 720 |
| BspLI | GGNNCC | 2 cut(s) | 85, 305 |
| BspPI | GGATC | 2 cut(s) | 19, 106 |
| BsrDI | GCAATG | 1 cut(s) | 380 |
| BsrGI | TGTACA | 1 cut(s) | 37 |
| BsrI | ACTGG | 2 cut(s) | 60, 558 |
| BssECI | CCNNGG | 3 cut(s) | 192, 226, 467 |
| BssMI | GATC | 4 cut(s) | 11, 22, 111, 156 |
| BssNI | GRCGYC | 2 cut(s) | 189, 632 |
| BssT1I | CCWWGG | 2 cut(s) | 192, 226 |
| Bst4CI | ACNGT | 2 cut(s) | 550, 598 |
| Bst6I | CTCTTC | 1 cut(s) | 288 |
| BstACI | GRCGYC | 2 cut(s) | 189, 632 |
| BstAUI | TGTACA | 1 cut(s) | 37 |
| BstC8I | GCNNGC | 1 cut(s) | 727 |
| BstEII | GGTNACC | 1 cut(s) | 841 |
| BstF5I | GGATG | 3 cut(s) | 528, 810, 864 |
| BstKTI | GATC | 4 cut(s) | 14, 25, 114, 159 |
| BstMAI | GTCTC | 2 cut(s) | 367, 444 |
| BstMBI | GATC | 4 cut(s) | 11, 22, 111, 156 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 493, 726 |
| BstNSI | RCATGY | 1 cut(s) | 380 |
| BstPI | GGTNACC | 1 cut(s) | 841 |
| BstSCI | CCNGG | 1 cut(s) | 466 |
| BstSFI | CTRYAG | 1 cut(s) | 346 |
| BstV1I | GCAGC | 4 cut(s) | 405, 415, 485, 571 |
| BstV2I | GAAGAC | 1 cut(s) | 684 |
| BsuRI | GGCC | 2 cut(s) | 149, 720 |
| BtgZI | GCGATG | 1 cut(s) | 446 |
| BtsCI | GGATG | 3 cut(s) | 528, 810, 864 |
| BtsIMutI | CAGTG | 1 cut(s) | 285 |
| Cac8I | GCNNGC | 1 cut(s) | 727 |
| Cfr13I | GGNCC | 1 cut(s) | 303 |
| CseI | GACGC | 1 cut(s) | 197 |
| Csp6I | GTAC | 4 cut(s) | 38, 546, 551, 937 |
| CviAII | CATG | 8 cut(s) | 26, 116, 277, 377, 751, 784, 801, 820 |
| CviQI | GTAC | 4 cut(s) | 38, 546, 551, 937 |
| DpnI | GATC | 4 cut(s) | 13, 24, 113, 158 |
| DpnII | GATC | 4 cut(s) | 11, 22, 111, 156 |
| DraI | TTTAAA | 1 cut(s) | 447 |
| EaeI | YGGCCR | 1 cut(s) | 147 |
| Eam1104I | CTCTTC | 1 cut(s) | 288 |
| EarI | CTCTTC | 1 cut(s) | 288 |
| Eco130I | CCWWGG | 2 cut(s) | 192, 226 |
| Eco47I | GGWCC | 1 cut(s) | 303 |
| Eco91I | GGTNACC | 1 cut(s) | 841 |
| EcoO109I | RGGNCCY | 1 cut(s) | 303 |
| EcoO65I | GGTNACC | 1 cut(s) | 841 |
| EcoT14I | CCWWGG | 2 cut(s) | 192, 226 |
| EcoT22I | ATGCAT | 2 cut(s) | 6, 382 |
| ErhI | CCWWGG | 2 cut(s) | 192, 226 |
| FaeI | CATG | 8 cut(s) | 29, 119, 280, 380, 754, 787, 804, 823 |
| FatI | CATG | 8 cut(s) | 25, 115, 276, 376, 750, 783, 800, 819 |
| FauNDI | CATATG | 2 cut(s) | 6, 423 |
| FbaI | TGATCA | 1 cut(s) | 156 |
| FblI | GTMKAC | 1 cut(s) | 222 |
| Fnu4HI | GCNGC | 5 cut(s) | 419, 429, 474, 585, 588 |
| FokI | GGATG | 3 cut(s) | 535, 817, 871 |
| Fsp4HI | GCNGC | 5 cut(s) | 419, 429, 474, 585, 588 |
| FspBI | CTAG | 2 cut(s) | 71, 722 |
| GluI | GCNGC | 5 cut(s) | 419, 429, 474, 585, 588 |
| HaeIII | GGCC | 2 cut(s) | 149, 720 |
| HapII | CCGG | 2 cut(s) | 467, 839 |
| HgaI | GACGC | 1 cut(s) | 197 |
| Hin1I | GRCGYC | 2 cut(s) | 189, 632 |
| Hin1II | CATG | 8 cut(s) | 29, 119, 280, 380, 754, 787, 804, 823 |
| HincII | GTYRAC | 1 cut(s) | 223 |
| HindII | GTYRAC | 1 cut(s) | 223 |
| HinfI | GANTC | 4 cut(s) | 265, 338, 363, 654 |
| HpaII | CCGG | 2 cut(s) | 467, 839 |
| Hpy166II | GTNNAC | 2 cut(s) | 38, 223 |
| Hpy188III | TCNNGA | 5 cut(s) | 20, 81, 269, 602, 658 |
| Hpy8I | GTNNAC | 2 cut(s) | 38, 223 |
| Hpy99I | CGWCG | 1 cut(s) | 634 |
| HpyAV | CCTTC | 2 cut(s) | 520, 740 |
| HpyCH4III | ACNGT | 2 cut(s) | 550, 598 |
| HpyCH4IV | ACGT | 3 cut(s) | 234, 632, 896 |
| HpyCH4V | TGCA | 8 cut(s) | 4, 184, 320, 380, 421, 481, 487, 830 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 493, 726 |
| HpySE526I | ACGT | 3 cut(s) | 234, 632, 896 |
| Hsp92I | GRCGYC | 2 cut(s) | 189, 632 |
| Hsp92II | CATG | 8 cut(s) | 29, 119, 280, 380, 754, 787, 804, 823 |
| Ksp22I | TGATCA | 1 cut(s) | 156 |
| Kzo9I | GATC | 4 cut(s) | 11, 22, 111, 156 |
| LmnI | GCTCC | 2 cut(s) | 282, 493 |
| Lsp1109I | GCAGC | 4 cut(s) | 405, 415, 485, 571 |
| LweI | GCATC | 2 cut(s) | 160, 595 |
| MaeI | CTAG | 2 cut(s) | 71, 722 |
| MaeII | ACGT | 3 cut(s) | 234, 632, 896 |
| MaeIII | GTNAC | 3 cut(s) | 633, 658, 841 |
| MalI | GATC | 4 cut(s) | 13, 24, 113, 158 |
| MboI | GATC | 4 cut(s) | 11, 22, 111, 156 |
| MboII | GAAGA | 3 cut(s) | 202, 305, 689 |
| MfeI | CAATTG | 1 cut(s) | 714 |
| MhlI | GDGCHC | 2 cut(s) | 287, 562 |
| MluCI | AATT | 4 cut(s) | 321, 412, 714, 923 |
| MlyI | GAGTC | 1 cut(s) | 357 |
| MnlI | CCTC | 3 cut(s) | 362, 483, 698 |
| Mph1103I | ATGCAT | 2 cut(s) | 6, 382 |
| MseI | TTAA | 3 cut(s) | 324, 446, 456 |
| MslI | CAYNNNNRTG | 1 cut(s) | 752 |
| MspI | CCGG | 2 cut(s) | 467, 839 |
| MspR9I | CCNGG | 1 cut(s) | 468 |
| MunI | CAATTG | 1 cut(s) | 714 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 493, 726 |
| NciI | CCSGG | 1 cut(s) | 468 |
| NdeI | CATATG | 2 cut(s) | 6, 423 |
| NdeII | GATC | 4 cut(s) | 11, 22, 111, 156 |
| NlaIII | CATG | 8 cut(s) | 29, 119, 280, 380, 754, 787, 804, 823 |
| NlaIV | GGNNCC | 2 cut(s) | 85, 305 |
| NmuCI | GTSAC | 2 cut(s) | 633, 658 |
| NsiI | ATGCAT | 2 cut(s) | 6, 382 |
| NspI | RCATGY | 1 cut(s) | 380 |
| PfeI | GAWTC | 3 cut(s) | 265, 338, 654 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 26 |
| PkrI | GCNGC | 5 cut(s) | 420, 430, 475, 586, 589 |
| PleI | GAGTC | 1 cut(s) | 357 |
| PpsI | GAGTC | 1 cut(s) | 357 |
| PpuMI | RGGWCCY | 1 cut(s) | 303 |
| Psp1406I | AACGTT | 1 cut(s) | 234 |
| Psp5II | RGGWCCY | 1 cut(s) | 303 |
| PspEI | GGTNACC | 1 cut(s) | 841 |
| PspN4I | GGNNCC | 2 cut(s) | 85, 305 |
| PspPI | GGNCC | 1 cut(s) | 303 |
| PspPPI | RGGWCCY | 1 cut(s) | 303 |
| RsaI | GTAC | 4 cut(s) | 39, 547, 552, 938 |
| RsaNI | GTAC | 4 cut(s) | 38, 546, 551, 937 |
| RseI | CAYNNNNRTG | 1 cut(s) | 752 |
| SalI | GTCGAC | 1 cut(s) | 221 |
| SaqAI | TTAA | 3 cut(s) | 324, 446, 456 |
| SatI | GCNGC | 5 cut(s) | 419, 429, 474, 585, 588 |
| Sau3AI | GATC | 4 cut(s) | 11, 22, 111, 156 |
| Sau96I | GGNCC | 1 cut(s) | 303 |
| SchI | GAGTC | 1 cut(s) | 357 |
| ScrFI | CCNGG | 1 cut(s) | 468 |
| SduI | GDGCHC | 2 cut(s) | 287, 562 |
| SetI | ASST | 9 cut(s) | 37, 111, 220, 237, 478, 498, 635, 848, 899 |
| SfaNI | GCATC | 2 cut(s) | 160, 595 |
| SfcI | CTRYAG | 1 cut(s) | 346 |
| SinI | GGWCC | 1 cut(s) | 303 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 752 |
| Sse9I | AATT | 4 cut(s) | 321, 412, 714, 923 |
| SsiI | CCGC | 1 cut(s) | 587 |
| SspI | AATATT | 1 cut(s) | 912 |
| SspMI | CTAG | 2 cut(s) | 71, 722 |
| StyD4I | CCNGG | 1 cut(s) | 466 |
| StyI | CCWWGG | 2 cut(s) | 192, 226 |
| TaaI | ACNGT | 2 cut(s) | 550, 598 |
| TaiI | ACGT | 3 cut(s) | 237, 635, 899 |
| TaqI | TCGA | 1 cut(s) | 222 |
| TasI | AATT | 4 cut(s) | 321, 412, 714, 923 |
| TatI | WGTACW | 3 cut(s) | 37, 545, 550 |
| TauI | GCSGC | 1 cut(s) | 590 |
| TfiI | GAWTC | 3 cut(s) | 265, 338, 654 |
| Tru1I | TTAA | 3 cut(s) | 324, 446, 456 |
| Tru9I | TTAA | 3 cut(s) | 324, 446, 456 |
| TscAI | CASTG | 1 cut(s) | 292 |
| TseFI | GTSAC | 2 cut(s) | 633, 658 |
| TseI | GCWGC | 4 cut(s) | 418, 428, 473, 584 |
| Tsp45I | GTSAC | 2 cut(s) | 633, 658 |
| TspDTI | ATGAA | 9 cut(s) | 114, 119, 216, 302, 306, 539, 603, 807, 877 |
| TspRI | CASTG | 1 cut(s) | 292 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 26 |
| VpaK11BI | GGWCC | 1 cut(s) | 303 |
| XapI | RAATTY | 1 cut(s) | 923 |
| XceI | RCATGY | 1 cut(s) | 380 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 276 |
| XmiI | GTMKAC | 1 cut(s) | 222 |
| XspI | CTAG | 2 cut(s) | 71, 722 |
| ZraI | GACGTC | 1 cut(s) | 633 |
| Zsp2I | ATGCAT | 2 cut(s) | 6, 382 |