protein ubiquitination
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 19 |
| AciI | CCGC | 4 cut(s) | 61, 105, 108, 330 |
| AclWI | GGATC | 2 cut(s) | 36, 317 |
| AfaI | GTAC | 3 cut(s) | 42, 90, 220 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 72, 73 |
| AgsI | TTSAA | 1 cut(s) | 52 |
| AluBI | AGCT | 3 cut(s) | 95, 119, 408 |
| AluI | AGCT | 3 cut(s) | 95, 119, 408 |
| AlwI | GGATC | 2 cut(s) | 36, 317 |
| AoxI | GGCC | 1 cut(s) | 63 |
| ApaI | GGGCCC | 1 cut(s) | 67 |
| ApeKI | GCWGC | 1 cut(s) | 169 |
| AspS9I | GGNCC | 2 cut(s) | 63, 64 |
| AsuC2I | CCSGG | 1 cut(s) | 67 |
| BaeGI | GKGCMC | 1 cut(s) | 67 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 24, 57 |
| BanII | GRGCYC | 1 cut(s) | 67 |
| BbsI | GAAGAC | 1 cut(s) | 127 |
| BbvI | GCAGC | 1 cut(s) | 156 |
| BccI | CCATC | 2 cut(s) | 17, 318 |
| BceAI | ACGGC | 2 cut(s) | 118, 157 |
| BciVI | GTATCC | 1 cut(s) | 244 |
| BcnI | CCSGG | 1 cut(s) | 67 |
| BfaI | CTAG | 1 cut(s) | 210 |
| BfmI | CTRYAG | 2 cut(s) | 12, 237 |
| BfuAI | ACCTGC | 1 cut(s) | 19 |
| BfuI | GTATCC | 1 cut(s) | 244 |
| BisI | GCNGC | 3 cut(s) | 106, 109, 170 |
| BlsI | GCNGC | 3 cut(s) | 107, 110, 171 |
| Bme1390I | CCNGG | 1 cut(s) | 67 |
| BmgT120I | GGNCC | 2 cut(s) | 63, 64 |
| BmiI | GGNNCC | 2 cut(s) | 65, 387 |
| BmrFI | CCNGG | 1 cut(s) | 67 |
| BmsI | GCATC | 1 cut(s) | 250 |
| BpiI | GAAGAC | 1 cut(s) | 127 |
| BpuMI | CCSGG | 1 cut(s) | 67 |
| BsaBI | GATNNNNATC | 1 cut(s) | 27 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 72, 73 |
| Bse1I | ACTGG | 1 cut(s) | 207 |
| Bse8I | GATNNNNATC | 1 cut(s) | 27 |
| BseGI | GGATG | 1 cut(s) | 28 |
| BseJI | GATNNNNATC | 1 cut(s) | 27 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 72, 73 |
| BseMII | CTCAG | 1 cut(s) | 350 |
| BseNI | ACTGG | 1 cut(s) | 207 |
| BseSI | GKGCMC | 1 cut(s) | 67 |
| BseXI | GCAGC | 1 cut(s) | 156 |
| Bsh1285I | CGRYCG | 1 cut(s) | 267 |
| BshFI | GGCC | 1 cut(s) | 65 |
| BsiEI | CGRYCG | 1 cut(s) | 267 |
| BsiSI | CCGG | 1 cut(s) | 67 |
| BslFI | GGGAC | 1 cut(s) | 228 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 72, 73 |
| BsmFI | GGGAC | 1 cut(s) | 228 |
| BsmI | GAATGC | 1 cut(s) | 358 |
| BsnI | GGCC | 1 cut(s) | 65 |
| Bsp120I | GGGCCC | 1 cut(s) | 63 |
| Bsp1286I | GDGCHC | 1 cut(s) | 67 |
| Bsp143I | GATC | 2 cut(s) | 28, 322 |
| BspACI | CCGC | 4 cut(s) | 61, 105, 108, 330 |
| BspANI | GGCC | 1 cut(s) | 65 |
| BspCNI | CTCAG | 1 cut(s) | 351 |
| BspLI | GGNNCC | 2 cut(s) | 65, 387 |
| BspMAI | CTGCAG | 1 cut(s) | 16 |
| BspMI | ACCTGC | 1 cut(s) | 19 |
| BspPI | GGATC | 2 cut(s) | 36, 317 |
| BspQI | GCTCTTC | 1 cut(s) | 126 |
| BsrI | ACTGG | 1 cut(s) | 207 |
| BssMI | GATC | 2 cut(s) | 28, 322 |
| Bst6I | CTCTTC | 1 cut(s) | 126 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 11 |
| BstC8I | GCNNGC | 1 cut(s) | 63 |
| BstDEI | CTNAG | 2 cut(s) | 96, 359 |
| BstF5I | GGATG | 1 cut(s) | 28 |
| BstKTI | GATC | 2 cut(s) | 31, 325 |
| BstMBI | GATC | 2 cut(s) | 28, 322 |
| BstMCI | CGRYCG | 1 cut(s) | 267 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 11, 67 |
| BstSCI | CCNGG | 1 cut(s) | 65 |
| BstSFI | CTRYAG | 2 cut(s) | 12, 237 |
| BstSLI | GKGCMC | 1 cut(s) | 67 |
| BstV1I | GCAGC | 1 cut(s) | 156 |
| BstV2I | GAAGAC | 1 cut(s) | 127 |
| BsuI | GTATCC | 1 cut(s) | 244 |
| BsuRI | GGCC | 1 cut(s) | 65 |
| BtsCI | GGATG | 1 cut(s) | 28 |
| BveI | ACCTGC | 1 cut(s) | 19 |
| Cac8I | GCNNGC | 1 cut(s) | 63 |
| Cfr13I | GGNCC | 2 cut(s) | 63, 64 |
| Csp6I | GTAC | 3 cut(s) | 41, 89, 219 |
| CviAII | CATG | 2 cut(s) | 148, 314 |
| CviJI | RGCY | 7 cut(s) | 65, 80, 95, 111, 119, 236, 408 |
| CviKI_1 | RGCY | 7 cut(s) | 65, 80, 95, 111, 119, 236, 408 |
| CviQI | GTAC | 3 cut(s) | 41, 89, 219 |
| DdeI | CTNAG | 2 cut(s) | 96, 359 |
| DpnI | GATC | 2 cut(s) | 30, 324 |
| DpnII | GATC | 2 cut(s) | 28, 322 |
| Eam1104I | CTCTTC | 1 cut(s) | 126 |
| EarI | CTCTTC | 1 cut(s) | 126 |
| EciI | GGCGGA | 1 cut(s) | 319 |
| Eco24I | GRGCYC | 1 cut(s) | 67 |
| EcoT38I | GRGCYC | 1 cut(s) | 67 |
| FaeI | CATG | 2 cut(s) | 151, 317 |
| FaiI | YATR | 6 cut(s) | 39, 149, 179, 194, 239, 315 |
| FaqI | GGGAC | 1 cut(s) | 228 |
| FatI | CATG | 2 cut(s) | 147, 313 |
| FauI | CCCGC | 1 cut(s) | 54 |
| Fnu4HI | GCNGC | 3 cut(s) | 106, 109, 170 |
| FokI | GGATG | 1 cut(s) | 35 |
| FriOI | GRGCYC | 1 cut(s) | 67 |
| Fsp4HI | GCNGC | 3 cut(s) | 106, 109, 170 |
| FspBI | CTAG | 1 cut(s) | 210 |
| GluI | GCNGC | 3 cut(s) | 106, 109, 170 |
| HaeIII | GGCC | 1 cut(s) | 65 |
| HapII | CCGG | 1 cut(s) | 67 |
| Hin1II | CATG | 2 cut(s) | 151, 317 |
| HinfI | GANTC | 1 cut(s) | 206 |
| HpaII | CCGG | 1 cut(s) | 67 |
| Hpy188I | TCNGA | 2 cut(s) | 33, 360 |
| Hpy188III | TCNNGA | 2 cut(s) | 143, 349 |
| HpyAV | CCTTC | 1 cut(s) | 336 |
| HpyCH4IV | ACGT | 1 cut(s) | 217 |
| HpyCH4V | TGCA | 2 cut(s) | 14, 131 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 11, 67 |
| HpyF3I | CTNAG | 2 cut(s) | 96, 359 |
| HpySE526I | ACGT | 1 cut(s) | 217 |
| Hsp92II | CATG | 2 cut(s) | 151, 317 |
| Kzo9I | GATC | 2 cut(s) | 28, 322 |
| LguI | GCTCTTC | 1 cut(s) | 126 |
| LpnPI | CCDG | 7 cut(s) | 24, 80, 97, 128, 188, 232, 362 |
| Lsp1109I | GCAGC | 1 cut(s) | 156 |
| LweI | GCATC | 1 cut(s) | 250 |
| MaeI | CTAG | 1 cut(s) | 210 |
| MaeII | ACGT | 1 cut(s) | 217 |
| MaeIII | GTNAC | 1 cut(s) | 390 |
| MalI | GATC | 2 cut(s) | 30, 324 |
| MboI | GATC | 2 cut(s) | 28, 322 |
| MboII | GAAGA | 4 cut(s) | 40, 113, 127, 304 |
| MhlI | GDGCHC | 1 cut(s) | 67 |
| MluCI | AATT | 1 cut(s) | 270 |
| MlyI | GAGTC | 1 cut(s) | 200 |
| MnlI | CCTC | 1 cut(s) | 70 |
| MspI | CCGG | 1 cut(s) | 67 |
| MspR9I | CCNGG | 1 cut(s) | 67 |
| Mva1269I | GAATGC | 1 cut(s) | 358 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 11, 67 |
| NciI | CCSGG | 1 cut(s) | 67 |
| NdeII | GATC | 2 cut(s) | 28, 322 |
| NlaIII | CATG | 2 cut(s) | 151, 317 |
| NlaIV | GGNNCC | 2 cut(s) | 65, 387 |
| PciSI | GCTCTTC | 1 cut(s) | 126 |
| PctI | GAATGC | 1 cut(s) | 358 |
| PkrI | GCNGC | 3 cut(s) | 107, 110, 171 |
| PleI | GAGTC | 1 cut(s) | 200 |
| PpsI | GAGTC | 1 cut(s) | 200 |
| PspN4I | GGNNCC | 2 cut(s) | 65, 387 |
| PspOMI | GGGCCC | 1 cut(s) | 63 |
| PspPI | GGNCC | 2 cut(s) | 63, 64 |
| PstI | CTGCAG | 1 cut(s) | 16 |
| RsaI | GTAC | 3 cut(s) | 42, 90, 220 |
| RsaNI | GTAC | 3 cut(s) | 41, 89, 219 |
| SapI | GCTCTTC | 1 cut(s) | 126 |
| SatI | GCNGC | 3 cut(s) | 106, 109, 170 |
| Sau3AI | GATC | 2 cut(s) | 28, 322 |
| Sau96I | GGNCC | 2 cut(s) | 63, 64 |
| SchI | GAGTC | 1 cut(s) | 200 |
| ScrFI | CCNGG | 1 cut(s) | 67 |
| SduI | GDGCHC | 1 cut(s) | 67 |
| SetI | ASST | 8 cut(s) | 13, 38, 46, 97, 121, 220, 387, 410 |
| SfaNI | GCATC | 1 cut(s) | 250 |
| SfcI | CTRYAG | 2 cut(s) | 12, 237 |
| Sse9I | AATT | 1 cut(s) | 270 |
| SsiI | CCGC | 4 cut(s) | 61, 105, 108, 330 |
| SspMI | CTAG | 1 cut(s) | 210 |
| StyD4I | CCNGG | 1 cut(s) | 65 |
| TaiI | ACGT | 1 cut(s) | 220 |
| TaqI | TCGA | 1 cut(s) | 321 |
| TaqII | GACCGA | 1 cut(s) | 281 |
| TasI | AATT | 1 cut(s) | 270 |
| TatI | WGTACW | 1 cut(s) | 88 |
| TauI | GCSGC | 2 cut(s) | 108, 111 |
| TseI | GCWGC | 1 cut(s) | 169 |
| TspDTI | ATGAA | 1 cut(s) | 194 |
| TspGWI | ACGGA | 1 cut(s) | 378 |
| XspI | CTAG | 1 cut(s) | 210 |