protein ubiquitination
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| PGG | PF13962 | 70 - 182 | 1.8e-26 | Domain of unknown function |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 160 |
| AciI | CCGC | 2 cut(s) | 158, 667 |
| AclWI | GGATC | 1 cut(s) | 132 |
| AcsI | RAATTY | 2 cut(s) | 326, 706 |
| AdeI | CACNNNGTG | 1 cut(s) | 13 |
| AfaI | GTAC | 1 cut(s) | 238 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 618 |
| AflIII | ACRYGT | 1 cut(s) | 133 |
| AgsI | TTSAA | 3 cut(s) | 94, 390, 706 |
| AluBI | AGCT | 1 cut(s) | 62 |
| AluI | AGCT | 1 cut(s) | 62 |
| Alw21I | GWGCWC | 1 cut(s) | 253 |
| AlwI | GGATC | 1 cut(s) | 132 |
| AoxI | GGCC | 2 cut(s) | 316, 481 |
| ApeKI | GCWGC | 3 cut(s) | 59, 275, 278 |
| ApoI | RAATTY | 2 cut(s) | 326, 706 |
| AsuC2I | CCSGG | 1 cut(s) | 294 |
| AsuHPI | GGTGA | 1 cut(s) | 481 |
| BaeGI | GKGCMC | 1 cut(s) | 538 |
| Bbv12I | GWGCWC | 1 cut(s) | 253 |
| BbvI | GCAGC | 3 cut(s) | 71, 262, 290 |
| BccI | CCATC | 2 cut(s) | 548, 571 |
| BclI | TGATCA | 1 cut(s) | 43 |
| BcnI | CCSGG | 1 cut(s) | 294 |
| BfmI | CTRYAG | 1 cut(s) | 276 |
| BisI | GCNGC | 3 cut(s) | 60, 276, 279 |
| BlsI | GCNGC | 3 cut(s) | 61, 277, 280 |
| Bme1390I | CCNGG | 1 cut(s) | 294 |
| BmrFI | CCNGG | 1 cut(s) | 294 |
| BmsI | GCATC | 2 cut(s) | 358, 612 |
| BpuMI | CCSGG | 1 cut(s) | 294 |
| Bsa29I | ATCGAT | 1 cut(s) | 566 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 618 |
| Bse1I | ACTGG | 1 cut(s) | 711 |
| BseCI | ATCGAT | 1 cut(s) | 566 |
| BseGI | GGATG | 1 cut(s) | 627 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 618 |
| BseNI | ACTGG | 1 cut(s) | 711 |
| BseSI | GKGCMC | 1 cut(s) | 538 |
| BseXI | GCAGC | 3 cut(s) | 71, 262, 290 |
| BsgI | GTGCAG | 1 cut(s) | 78 |
| Bsh1236I | CGCG | 1 cut(s) | 160 |
| BshFI | GGCC | 2 cut(s) | 318, 483 |
| BshVI | ATCGAT | 1 cut(s) | 566 |
| BsiHKAI | GWGCWC | 1 cut(s) | 253 |
| BsiSI | CCGG | 1 cut(s) | 293 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 618 |
| BsmI | GAATGC | 2 cut(s) | 281, 417 |
| BsnI | GGCC | 2 cut(s) | 318, 483 |
| Bsp1286I | GDGCHC | 2 cut(s) | 253, 538 |
| Bsp1407I | TGTACA | 1 cut(s) | 236 |
| Bsp143I | GATC | 2 cut(s) | 43, 124 |
| BspACI | CCGC | 2 cut(s) | 158, 667 |
| BspANI | GGCC | 2 cut(s) | 318, 483 |
| BspDI | ATCGAT | 1 cut(s) | 566 |
| BspFNI | CGCG | 1 cut(s) | 160 |
| BspMAI | CTGCAG | 1 cut(s) | 280 |
| BspPI | GGATC | 1 cut(s) | 132 |
| BsrGI | TGTACA | 1 cut(s) | 236 |
| BsrI | ACTGG | 1 cut(s) | 711 |
| BssMI | GATC | 2 cut(s) | 43, 124 |
| Bst4CI | ACNGT | 4 cut(s) | 13, 87, 241, 289 |
| Bst6I | CTCTTC | 1 cut(s) | 500 |
| BstAUI | TGTACA | 1 cut(s) | 236 |
| BstC8I | GCNNGC | 2 cut(s) | 591, 595 |
| BstF5I | GGATG | 1 cut(s) | 627 |
| BstFNI | CGCG | 1 cut(s) | 160 |
| BstKTI | GATC | 2 cut(s) | 46, 127 |
| BstMBI | GATC | 2 cut(s) | 43, 124 |
| BstNSI | RCATGY | 1 cut(s) | 137 |
| BstSCI | CCNGG | 1 cut(s) | 292 |
| BstSFI | CTRYAG | 1 cut(s) | 276 |
| BstSLI | GKGCMC | 1 cut(s) | 538 |
| BstUI | CGCG | 1 cut(s) | 160 |
| BstV1I | GCAGC | 3 cut(s) | 71, 262, 290 |
| Bsu15I | ATCGAT | 1 cut(s) | 566 |
| BsuRI | GGCC | 2 cut(s) | 318, 483 |
| BsuTUI | ATCGAT | 1 cut(s) | 566 |
| BtsCI | GGATG | 1 cut(s) | 627 |
| BtsIMutI | CAGTG | 3 cut(s) | 18, 92, 718 |
| Cac8I | GCNNGC | 2 cut(s) | 591, 595 |
| ClaI | ATCGAT | 1 cut(s) | 566 |
| Csp6I | GTAC | 1 cut(s) | 237 |
| CviAII | CATG | 4 cut(s) | 110, 134, 406, 514 |
| CviJI | RGCY | 4 cut(s) | 62, 108, 318, 483 |
| CviKI_1 | RGCY | 4 cut(s) | 62, 108, 318, 483 |
| CviQI | GTAC | 1 cut(s) | 237 |
| DpnI | GATC | 2 cut(s) | 45, 126 |
| DpnII | GATC | 2 cut(s) | 43, 124 |
| DraIII | CACNNNGTG | 1 cut(s) | 13 |
| Eam1104I | CTCTTC | 1 cut(s) | 500 |
| EarI | CTCTTC | 1 cut(s) | 500 |
| Eco147I | AGGCCT | 2 cut(s) | 318, 483 |
| EcoRI | GAATTC | 1 cut(s) | 706 |
| EcoT22I | ATGCAT | 1 cut(s) | 115 |
| FaeI | CATG | 4 cut(s) | 113, 137, 409, 517 |
| FatI | CATG | 4 cut(s) | 109, 133, 405, 513 |
| FauI | CCCGC | 1 cut(s) | 660 |
| FbaI | TGATCA | 1 cut(s) | 43 |
| Fnu4HI | GCNGC | 3 cut(s) | 60, 276, 279 |
| FokI | GGATG | 1 cut(s) | 634 |
| Fsp4HI | GCNGC | 3 cut(s) | 60, 276, 279 |
| GluI | GCNGC | 3 cut(s) | 60, 276, 279 |
| HaeIII | GGCC | 2 cut(s) | 318, 483 |
| HapII | CCGG | 1 cut(s) | 293 |
| Hin1II | CATG | 4 cut(s) | 113, 137, 409, 517 |
| HinfI | GANTC | 1 cut(s) | 178 |
| HpaII | CCGG | 1 cut(s) | 293 |
| HphI | GGTGA | 1 cut(s) | 481 |
| Hpy166II | GTNNAC | 2 cut(s) | 131, 139 |
| Hpy188I | TCNGA | 2 cut(s) | 367, 439 |
| Hpy188III | TCNNGA | 2 cut(s) | 128, 619 |
| Hpy8I | GTNNAC | 2 cut(s) | 131, 139 |
| HpyAV | CCTTC | 3 cut(s) | 211, 329, 622 |
| HpyCH4III | ACNGT | 4 cut(s) | 13, 87, 241, 289 |
| HpyCH4IV | ACGT | 1 cut(s) | 430 |
| HpyCH4V | TGCA | 7 cut(s) | 59, 67, 73, 113, 278, 371, 625 |
| HpySE526I | ACGT | 1 cut(s) | 430 |
| Hsp92II | CATG | 4 cut(s) | 113, 137, 409, 517 |
| Ksp22I | TGATCA | 1 cut(s) | 43 |
| Kzo9I | GATC | 2 cut(s) | 43, 124 |
| LpnPI | CCDG | 5 cut(s) | 300, 306, 604, 607, 724 |
| Lsp1109I | GCAGC | 3 cut(s) | 71, 262, 290 |
| LweI | GCATC | 2 cut(s) | 358, 612 |
| MaeII | ACGT | 1 cut(s) | 430 |
| MaeIII | GTNAC | 2 cut(s) | 33, 259 |
| MalI | GATC | 2 cut(s) | 45, 126 |
| MboI | GATC | 2 cut(s) | 43, 124 |
| MboII | GAAGA | 3 cut(s) | 378, 452, 487 |
| MfeI | CAATTG | 1 cut(s) | 603 |
| MhlI | GDGCHC | 2 cut(s) | 253, 538 |
| MluCI | AATT | 4 cut(s) | 326, 603, 626, 706 |
| MnlI | CCTC | 5 cut(s) | 47, 91, 193, 503, 619 |
| Mph1103I | ATGCAT | 1 cut(s) | 115 |
| MseI | TTAA | 3 cut(s) | 332, 647, 727 |
| MslI | CAYNNNNRTG | 3 cut(s) | 470, 515, 620 |
| MspI | CCGG | 1 cut(s) | 293 |
| MspR9I | CCNGG | 1 cut(s) | 294 |
| MunI | CAATTG | 1 cut(s) | 603 |
| Mva1269I | GAATGC | 2 cut(s) | 281, 417 |
| MvnI | CGCG | 1 cut(s) | 160 |
| NciI | CCSGG | 1 cut(s) | 294 |
| NdeII | GATC | 2 cut(s) | 43, 124 |
| NlaIII | CATG | 4 cut(s) | 113, 137, 409, 517 |
| NmuCI | GTSAC | 1 cut(s) | 33 |
| NsiI | ATGCAT | 1 cut(s) | 115 |
| NspI | RCATGY | 1 cut(s) | 137 |
| PceI | AGGCCT | 2 cut(s) | 318, 483 |
| PciI | ACATGT | 1 cut(s) | 133 |
| PctI | GAATGC | 2 cut(s) | 281, 417 |
| PfeI | GAWTC | 1 cut(s) | 178 |
| PkrI | GCNGC | 3 cut(s) | 61, 277, 280 |
| PscI | ACATGT | 1 cut(s) | 133 |
| PstI | CTGCAG | 1 cut(s) | 280 |
| RsaI | GTAC | 1 cut(s) | 238 |
| RsaNI | GTAC | 1 cut(s) | 237 |
| RseI | CAYNNNNRTG | 3 cut(s) | 470, 515, 620 |
| SaqAI | TTAA | 3 cut(s) | 332, 647, 727 |
| SatI | GCNGC | 3 cut(s) | 60, 276, 279 |
| Sau3AI | GATC | 2 cut(s) | 43, 124 |
| ScrFI | CCNGG | 1 cut(s) | 294 |
| SduI | GDGCHC | 2 cut(s) | 253, 538 |
| SetI | ASST | 6 cut(s) | 58, 64, 102, 250, 345, 433 |
| SfaNI | GCATC | 2 cut(s) | 358, 612 |
| SfcI | CTRYAG | 1 cut(s) | 276 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 470, 515, 620 |
| Sse9I | AATT | 4 cut(s) | 326, 603, 626, 706 |
| SseBI | AGGCCT | 2 cut(s) | 318, 483 |
| SsiI | CCGC | 2 cut(s) | 158, 667 |
| SspI | AATATT | 2 cut(s) | 168, 675 |
| StuI | AGGCCT | 2 cut(s) | 318, 483 |
| StyD4I | CCNGG | 1 cut(s) | 292 |
| TaaI | ACNGT | 4 cut(s) | 13, 87, 241, 289 |
| TaiI | ACGT | 1 cut(s) | 433 |
| TaqI | TCGA | 2 cut(s) | 52, 566 |
| TasI | AATT | 4 cut(s) | 326, 603, 626, 706 |
| TatI | WGTACW | 1 cut(s) | 236 |
| TfiI | GAWTC | 1 cut(s) | 178 |
| Tru1I | TTAA | 3 cut(s) | 332, 647, 727 |
| Tru9I | TTAA | 3 cut(s) | 332, 647, 727 |
| TscAI | CASTG | 3 cut(s) | 18, 92, 718 |
| TseFI | GTSAC | 1 cut(s) | 33 |
| TseI | GCWGC | 3 cut(s) | 59, 275, 278 |
| Tsp45I | GTSAC | 1 cut(s) | 33 |
| TspDTI | ATGAA | 3 cut(s) | 230, 321, 604 |
| TspGWI | ACGGA | 2 cut(s) | 156, 621 |
| TspRI | CASTG | 3 cut(s) | 18, 92, 718 |
| XapI | RAATTY | 2 cut(s) | 326, 706 |
| XceI | RCATGY | 1 cut(s) | 137 |
| Zsp2I | ATGCAT | 1 cut(s) | 115 |