protein ubiquitination
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 207, 815 |
| AciI | CCGC | 1 cut(s) | 591 |
| AclI | AACGTT | 2 cut(s) | 674, 961 |
| AclWI | GGATC | 3 cut(s) | 39, 230, 441 |
| AcsI | RAATTY | 3 cut(s) | 684, 893, 941 |
| AcuI | CTGAAG | 2 cut(s) | 116, 615 |
| AfaI | GTAC | 2 cut(s) | 365, 384 |
| AgsI | TTSAA | 1 cut(s) | 861 |
| AjiI | CACGTC | 1 cut(s) | 693 |
| AjnI | CCWGG | 2 cut(s) | 562, 830 |
| AluBI | AGCT | 5 cut(s) | 40, 74, 248, 335, 629 |
| AluI | AGCT | 5 cut(s) | 40, 74, 248, 335, 629 |
| Alw21I | GWGCWC | 2 cut(s) | 50, 523 |
| Alw26I | GTCTC | 1 cut(s) | 485 |
| AlwI | GGATC | 3 cut(s) | 39, 230, 441 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 43, 563 |
| ApeKI | GCWGC | 5 cut(s) | 40, 332, 346, 545, 548 |
| ApoI | RAATTY | 3 cut(s) | 684, 893, 941 |
| AsuC2I | CCSGG | 1 cut(s) | 327 |
| AsuHPI | GGTGA | 1 cut(s) | 485 |
| BbsI | GAAGAC | 1 cut(s) | 714 |
| Bbv12I | GWGCWC | 2 cut(s) | 50, 523 |
| BbvI | GCAGC | 5 cut(s) | 27, 344, 358, 532, 535 |
| BccI | CCATC | 1 cut(s) | 883 |
| BceAI | ACGGC | 1 cut(s) | 164 |
| BciT130I | CCWGG | 2 cut(s) | 564, 832 |
| BcnI | CCSGG | 1 cut(s) | 327 |
| BcoDI | GTCTC | 1 cut(s) | 485 |
| BfaI | CTAG | 1 cut(s) | 905 |
| BfmI | CTRYAG | 1 cut(s) | 464 |
| BglII | AGATCT | 1 cut(s) | 162 |
| BisI | GCNGC | 5 cut(s) | 41, 333, 347, 546, 549 |
| BlpI | GCTNAGC | 1 cut(s) | 44 |
| BlsI | GCNGC | 5 cut(s) | 42, 334, 348, 547, 550 |
| Bme1390I | CCNGG | 3 cut(s) | 327, 564, 832 |
| BmgBI | CACGTC | 1 cut(s) | 693 |
| BmrFI | CCNGG | 3 cut(s) | 327, 564, 832 |
| BmsI | GCATC | 2 cut(s) | 333, 625 |
| BpiI | GAAGAC | 1 cut(s) | 714 |
| BpmI | CTGGAG | 1 cut(s) | 585 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 44 |
| BpuMI | CCSGG | 1 cut(s) | 327 |
| BsaJI | CCNNGG | 1 cut(s) | 428 |
| BsaWI | WCCGGW | 1 cut(s) | 844 |
| Bse118I | RCCGGY | 1 cut(s) | 581 |
| Bse1I | ACTGG | 1 cut(s) | 869 |
| Bse3DI | GCAATG | 1 cut(s) | 69 |
| BseBI | CCWGG | 2 cut(s) | 564, 832 |
| BseDI | CCNNGG | 1 cut(s) | 428 |
| BseGI | GGATG | 1 cut(s) | 894 |
| BseMI | GCAATG | 1 cut(s) | 69 |
| BseMII | CTCAG | 1 cut(s) | 35 |
| BseNI | ACTGG | 1 cut(s) | 869 |
| BseRI | GAGGAG | 1 cut(s) | 389 |
| BseXI | GCAGC | 5 cut(s) | 27, 344, 358, 532, 535 |
| BsgI | GTGCAG | 1 cut(s) | 351 |
| BsiHKAI | GWGCWC | 2 cut(s) | 50, 523 |
| BsiSI | CCGG | 3 cut(s) | 326, 582, 845 |
| BsmAI | GTCTC | 1 cut(s) | 485 |
| BsmI | GAATGC | 1 cut(s) | 593 |
| Bsp1286I | GDGCHC | 2 cut(s) | 50, 523 |
| Bsp143I | GATC | 4 cut(s) | 31, 162, 222, 433 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 44 |
| BspACI | CCGC | 1 cut(s) | 591 |
| BspCNI | CTCAG | 1 cut(s) | 36 |
| BspPI | GGATC | 3 cut(s) | 39, 230, 441 |
| BsrDI | GCAATG | 1 cut(s) | 69 |
| BsrFI | RCCGGY | 1 cut(s) | 581 |
| BsrI | ACTGG | 1 cut(s) | 869 |
| BssAI | RCCGGY | 1 cut(s) | 581 |
| BssECI | CCNNGG | 1 cut(s) | 428 |
| BssMI | GATC | 4 cut(s) | 31, 162, 222, 433 |
| BssT1I | CCWWGG | 1 cut(s) | 428 |
| Bst2UI | CCWGG | 2 cut(s) | 564, 832 |
| Bst4CI | ACNGT | 5 cut(s) | 52, 455, 511, 559, 932 |
| BstC8I | GCNNGC | 2 cut(s) | 297, 753 |
| BstDEI | CTNAG | 2 cut(s) | 44, 105 |
| BstF5I | GGATG | 1 cut(s) | 894 |
| BstKTI | GATC | 4 cut(s) | 34, 165, 225, 436 |
| BstMAI | GTCTC | 1 cut(s) | 485 |
| BstMBI | GATC | 4 cut(s) | 31, 162, 222, 433 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 346, 635 |
| BstNI | CCWGG | 2 cut(s) | 564, 832 |
| BstNSI | RCATGY | 1 cut(s) | 277 |
| BstSCI | CCNGG | 3 cut(s) | 325, 562, 830 |
| BstSFI | CTRYAG | 1 cut(s) | 464 |
| BstV1I | GCAGC | 5 cut(s) | 27, 344, 358, 532, 535 |
| BstV2I | GAAGAC | 1 cut(s) | 714 |
| BstX2I | RGATCY | 3 cut(s) | 162, 222, 433 |
| BstYI | RGATCY | 3 cut(s) | 162, 222, 433 |
| BtrI | CACGTC | 1 cut(s) | 693 |
| BtsCI | GGATG | 1 cut(s) | 894 |
| BtsIMutI | CAGTG | 2 cut(s) | 48, 460 |
| Cac8I | GCNNGC | 2 cut(s) | 297, 753 |
| CaiI | CAGNNNCTG | 2 cut(s) | 43, 563 |
| Cfr10I | RCCGGY | 1 cut(s) | 581 |
| Csp6I | GTAC | 2 cut(s) | 364, 383 |
| CviAII | CATG | 5 cut(s) | 28, 218, 274, 535, 781 |
| CviJI | RGCY | 8 cut(s) | 40, 56, 74, 248, 335, 585, 629, 751 |
| CviKI_1 | RGCY | 8 cut(s) | 40, 56, 74, 248, 335, 585, 629, 751 |
| CviQI | GTAC | 2 cut(s) | 364, 383 |
| DdeI | CTNAG | 2 cut(s) | 44, 105 |
| DpnI | GATC | 4 cut(s) | 33, 164, 224, 435 |
| DpnII | GATC | 4 cut(s) | 31, 162, 222, 433 |
| Eco130I | CCWWGG | 1 cut(s) | 428 |
| Eco57I | CTGAAG | 2 cut(s) | 116, 615 |
| EcoRI | GAATTC | 2 cut(s) | 684, 893 |
| EcoRII | CCWGG | 2 cut(s) | 562, 830 |
| EcoT14I | CCWWGG | 1 cut(s) | 428 |
| ErhI | CCWWGG | 1 cut(s) | 428 |
| FaeI | CATG | 5 cut(s) | 31, 221, 277, 538, 784 |
| FatI | CATG | 5 cut(s) | 27, 217, 273, 534, 780 |
| FauI | CCCGC | 1 cut(s) | 598 |
| FauNDI | CATATG | 1 cut(s) | 282 |
| Fnu4HI | GCNGC | 5 cut(s) | 41, 333, 347, 546, 549 |
| FokI | GGATG | 1 cut(s) | 901 |
| Fsp4HI | GCNGC | 5 cut(s) | 41, 333, 347, 546, 549 |
| FspBI | CTAG | 1 cut(s) | 905 |
| GluI | GCNGC | 5 cut(s) | 41, 333, 347, 546, 549 |
| GsuI | CTGGAG | 1 cut(s) | 585 |
| HapII | CCGG | 3 cut(s) | 326, 582, 845 |
| Hin1II | CATG | 5 cut(s) | 31, 221, 277, 538, 784 |
| HinfI | GANTC | 3 cut(s) | 401, 448, 841 |
| HpaII | CCGG | 3 cut(s) | 326, 582, 845 |
| HphI | GGTGA | 1 cut(s) | 485 |
| Hpy166II | GTNNAC | 2 cut(s) | 353, 824 |
| Hpy188I | TCNGA | 2 cut(s) | 71, 634 |
| Hpy188III | TCNNGA | 5 cut(s) | 125, 142, 194, 398, 718 |
| Hpy8I | GTNNAC | 2 cut(s) | 353, 824 |
| Hpy99I | CGWCG | 1 cut(s) | 95 |
| HpyAV | CCTTC | 2 cut(s) | 815, 911 |
| HpyCH4III | ACNGT | 5 cut(s) | 52, 455, 511, 559, 932 |
| HpyCH4IV | ACGT | 5 cut(s) | 90, 674, 692, 697, 961 |
| HpyCH4V | TGCA | 9 cut(s) | 6, 217, 230, 332, 340, 346, 665, 704, 776 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 346, 635 |
| HpyF3I | CTNAG | 2 cut(s) | 44, 105 |
| HpySE526I | ACGT | 5 cut(s) | 90, 674, 692, 697, 961 |
| Hsp92II | CATG | 5 cut(s) | 31, 221, 277, 538, 784 |
| Kzo9I | GATC | 4 cut(s) | 31, 162, 222, 433 |
| LmnI | GCTCC | 1 cut(s) | 72 |
| Lsp1109I | GCAGC | 5 cut(s) | 27, 344, 358, 532, 535 |
| LweI | GCATC | 2 cut(s) | 333, 625 |
| MaeI | CTAG | 1 cut(s) | 905 |
| MaeII | ACGT | 5 cut(s) | 90, 674, 692, 697, 961 |
| MaeIII | GTNAC | 3 cut(s) | 449, 693, 871 |
| MalI | GATC | 4 cut(s) | 33, 164, 224, 435 |
| MboI | GATC | 4 cut(s) | 31, 162, 222, 433 |
| MboII | GAAGA | 2 cut(s) | 645, 719 |
| MflI | RGATCY | 3 cut(s) | 162, 222, 433 |
| MhlI | GDGCHC | 2 cut(s) | 50, 523 |
| MluCI | AATT | 9 cut(s) | 316, 418, 458, 608, 684, 810, 893, 912, 941 |
| MlyI | GAGTC | 2 cut(s) | 395, 457 |
| MnlI | CCTC | 4 cut(s) | 367, 370, 396, 560 |
| MseI | TTAA | 4 cut(s) | 315, 486, 671, 945 |
| MslI | CAYNNNNRTG | 1 cut(s) | 737 |
| MspA1I | CMGCKG | 1 cut(s) | 40 |
| MspI | CCGG | 3 cut(s) | 326, 582, 845 |
| MspR9I | CCNGG | 3 cut(s) | 327, 564, 832 |
| Mva1269I | GAATGC | 1 cut(s) | 593 |
| MvaI | CCWGG | 2 cut(s) | 564, 832 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 346, 635 |
| NciI | CCSGG | 1 cut(s) | 327 |
| NdeI | CATATG | 1 cut(s) | 282 |
| NdeII | GATC | 4 cut(s) | 31, 162, 222, 433 |
| NlaIII | CATG | 5 cut(s) | 31, 221, 277, 538, 784 |
| NmuCI | GTSAC | 3 cut(s) | 449, 693, 871 |
| NspI | RCATGY | 1 cut(s) | 277 |
| PctI | GAATGC | 1 cut(s) | 593 |
| PfeI | GAWTC | 1 cut(s) | 841 |
| PfoI | TCCNGGA | 2 cut(s) | 562, 830 |
| PkrI | GCNGC | 5 cut(s) | 42, 334, 348, 547, 550 |
| PleI | GAGTC | 2 cut(s) | 395, 456 |
| PpsI | GAGTC | 2 cut(s) | 395, 456 |
| PsiI | TTATAA | 2 cut(s) | 207, 815 |
| Psp1406I | AACGTT | 2 cut(s) | 674, 961 |
| Psp6I | CCWGG | 2 cut(s) | 562, 830 |
| PspGI | CCWGG | 2 cut(s) | 562, 830 |
| PstNI | CAGNNNCTG | 2 cut(s) | 43, 563 |
| PsuI | RGATCY | 3 cut(s) | 162, 222, 433 |
| PvuII | CAGCTG | 1 cut(s) | 40 |
| RsaI | GTAC | 2 cut(s) | 365, 384 |
| RsaNI | GTAC | 2 cut(s) | 364, 383 |
| RseI | CAYNNNNRTG | 1 cut(s) | 737 |
| SaqAI | TTAA | 4 cut(s) | 315, 486, 671, 945 |
| SatI | GCNGC | 5 cut(s) | 41, 333, 347, 546, 549 |
| Sau3AI | GATC | 4 cut(s) | 31, 162, 222, 433 |
| SchI | GAGTC | 2 cut(s) | 395, 457 |
| ScrFI | CCNGG | 3 cut(s) | 327, 564, 832 |
| SduI | GDGCHC | 2 cut(s) | 50, 523 |
| SfaNI | GCATC | 2 cut(s) | 333, 625 |
| SfcI | CTRYAG | 1 cut(s) | 464 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 737 |
| Sse9I | AATT | 9 cut(s) | 316, 418, 458, 608, 684, 810, 893, 912, 941 |
| SsiI | CCGC | 1 cut(s) | 591 |
| SspMI | CTAG | 1 cut(s) | 905 |
| StyD4I | CCNGG | 3 cut(s) | 325, 562, 830 |
| StyI | CCWWGG | 1 cut(s) | 428 |
| TaaI | ACNGT | 5 cut(s) | 52, 455, 511, 559, 932 |
| TaiI | ACGT | 5 cut(s) | 93, 677, 695, 700, 964 |
| TaqI | TCGA | 1 cut(s) | 93 |
| TasI | AATT | 9 cut(s) | 316, 418, 458, 608, 684, 810, 893, 912, 941 |
| TfiI | GAWTC | 1 cut(s) | 841 |
| Tru1I | TTAA | 4 cut(s) | 315, 486, 671, 945 |
| Tru9I | TTAA | 4 cut(s) | 315, 486, 671, 945 |
| TscAI | CASTG | 2 cut(s) | 55, 460 |
| TseFI | GTSAC | 3 cut(s) | 449, 693, 871 |
| TseI | GCWGC | 5 cut(s) | 40, 332, 346, 545, 548 |
| Tsp45I | GTSAC | 3 cut(s) | 449, 693, 871 |
| TspDTI | ATGAA | 4 cut(s) | 165, 232, 586, 618 |
| TspRI | CASTG | 2 cut(s) | 55, 460 |
| XapI | RAATTY | 3 cut(s) | 684, 893, 941 |
| XceI | RCATGY | 1 cut(s) | 277 |
| XspI | CTAG | 1 cut(s) | 905 |