protein ubiquitination
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 285 |
| AccBSI | CCGCTC | 1 cut(s) | 49 |
| AciI | CCGC | 3 cut(s) | 49, 258, 841 |
| AclWI | GGATC | 1 cut(s) | 522 |
| AcoI | YGGCCR | 1 cut(s) | 337 |
| AcsI | RAATTY | 2 cut(s) | 716, 1096 |
| AcuI | CTGAAG | 1 cut(s) | 849 |
| AdeI | CACNNNGTG | 1 cut(s) | 403 |
| AfaI | GTAC | 1 cut(s) | 628 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 1008 |
| AgsI | TTSAA | 2 cut(s) | 780, 1096 |
| AjnI | CCWGG | 1 cut(s) | 682 |
| AluBI | AGCT | 2 cut(s) | 243, 452 |
| AluI | AGCT | 2 cut(s) | 243, 452 |
| Alw21I | GWGCWC | 1 cut(s) | 643 |
| AlwI | GGATC | 1 cut(s) | 522 |
| AoxI | GGCC | 3 cut(s) | 337, 706, 871 |
| ApeKI | GCWGC | 4 cut(s) | 134, 449, 665, 668 |
| ApoI | RAATTY | 2 cut(s) | 716, 1096 |
| AspS9I | GGNCC | 1 cut(s) | 52 |
| AsuHPI | GGTGA | 2 cut(s) | 643, 871 |
| AvaII | GGWCC | 1 cut(s) | 52 |
| BaeGI | GKGCMC | 1 cut(s) | 928 |
| BalI | TGGCCA | 1 cut(s) | 339 |
| BauI | CACGAG | 1 cut(s) | 549 |
| Bbv12I | GWGCWC | 1 cut(s) | 643 |
| BbvI | GCAGC | 4 cut(s) | 146, 461, 652, 680 |
| BciT130I | CCWGG | 1 cut(s) | 684 |
| BclI | TGATCA | 1 cut(s) | 433 |
| BfmI | CTRYAG | 3 cut(s) | 172, 473, 666 |
| BisI | GCNGC | 5 cut(s) | 135, 258, 450, 666, 669 |
| BlsI | GCNGC | 5 cut(s) | 136, 259, 451, 667, 670 |
| Bme1390I | CCNGG | 1 cut(s) | 684 |
| Bme18I | GGWCC | 1 cut(s) | 52 |
| BmgT120I | GGNCC | 1 cut(s) | 52 |
| BmiI | GGNNCC | 1 cut(s) | 53 |
| BmrFI | CCNGG | 1 cut(s) | 684 |
| BmsI | GCATC | 3 cut(s) | 30, 748, 1002 |
| BsaJI | CCNNGG | 2 cut(s) | 340, 509 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 1008 |
| Bse1I | ACTGG | 1 cut(s) | 992 |
| Bse3DI | GCAATG | 1 cut(s) | 848 |
| BseBI | CCWGG | 1 cut(s) | 684 |
| BseDI | CCNNGG | 2 cut(s) | 340, 509 |
| BseGI | GGATG | 1 cut(s) | 1017 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 1008 |
| BseMI | GCAATG | 1 cut(s) | 848 |
| BseNI | ACTGG | 1 cut(s) | 992 |
| BseSI | GKGCMC | 1 cut(s) | 928 |
| BseXI | GCAGC | 4 cut(s) | 146, 461, 652, 680 |
| BsgI | GTGCAG | 1 cut(s) | 468 |
| BshFI | GGCC | 3 cut(s) | 339, 708, 873 |
| BsiHKAI | GWGCWC | 1 cut(s) | 643 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 1008 |
| BsmI | GAATGC | 2 cut(s) | 671, 807 |
| BsnI | GGCC | 3 cut(s) | 339, 708, 873 |
| Bsp1286I | GDGCHC | 2 cut(s) | 643, 928 |
| Bsp1407I | TGTACA | 1 cut(s) | 626 |
| Bsp143I | GATC | 2 cut(s) | 433, 514 |
| BspACI | CCGC | 3 cut(s) | 49, 258, 841 |
| BspANI | GGCC | 3 cut(s) | 339, 708, 873 |
| BspLI | GGNNCC | 1 cut(s) | 53 |
| BspMAI | CTGCAG | 1 cut(s) | 670 |
| BspPI | GGATC | 1 cut(s) | 522 |
| BsrBI | CCGCTC | 1 cut(s) | 49 |
| BsrDI | GCAATG | 1 cut(s) | 848 |
| BsrGI | TGTACA | 1 cut(s) | 626 |
| BsrI | ACTGG | 1 cut(s) | 992 |
| BssECI | CCNNGG | 2 cut(s) | 340, 509 |
| BssMI | GATC | 2 cut(s) | 433, 514 |
| BssSI | CACGAG | 1 cut(s) | 549 |
| BssT1I | CCWWGG | 1 cut(s) | 509 |
| Bst2BI | CACGAG | 1 cut(s) | 549 |
| Bst2UI | CCWGG | 1 cut(s) | 684 |
| Bst4CI | ACNGT | 8 cut(s) | 60, 126, 344, 403, 477, 631, 679, 961 |
| Bst6I | CTCTTC | 1 cut(s) | 890 |
| BstAUI | TGTACA | 1 cut(s) | 626 |
| BstC8I | GCNNGC | 2 cut(s) | 981, 985 |
| BstDEI | CTNAG | 1 cut(s) | 7 |
| BstDSI | CCRYGG | 1 cut(s) | 340 |
| BstF5I | GGATG | 1 cut(s) | 1017 |
| BstKTI | GATC | 2 cut(s) | 436, 517 |
| BstMBI | GATC | 2 cut(s) | 433, 514 |
| BstNI | CCWGG | 1 cut(s) | 684 |
| BstNSI | RCATGY | 1 cut(s) | 152 |
| BstSCI | CCNGG | 1 cut(s) | 682 |
| BstSFI | CTRYAG | 3 cut(s) | 172, 473, 666 |
| BstSLI | GKGCMC | 1 cut(s) | 928 |
| BstV1I | GCAGC | 4 cut(s) | 146, 461, 652, 680 |
| BsuRI | GGCC | 3 cut(s) | 339, 708, 873 |
| BtgI | CCRYGG | 1 cut(s) | 340 |
| BtsCI | GGATG | 1 cut(s) | 1017 |
| BtsIMutI | CAGTG | 3 cut(s) | 122, 408, 482 |
| Cac8I | GCNNGC | 2 cut(s) | 981, 985 |
| Cfr13I | GGNCC | 1 cut(s) | 52 |
| Csp6I | GTAC | 1 cut(s) | 627 |
| CviAII | CATG | 7 cut(s) | 44, 73, 149, 317, 500, 796, 904 |
| CviJI | RGCY | 8 cut(s) | 83, 110, 243, 339, 452, 498, 708, 873 |
| CviKI_1 | RGCY | 8 cut(s) | 83, 110, 243, 339, 452, 498, 708, 873 |
| CviQI | GTAC | 1 cut(s) | 627 |
| DdeI | CTNAG | 1 cut(s) | 7 |
| DpnI | GATC | 2 cut(s) | 435, 516 |
| DpnII | GATC | 2 cut(s) | 433, 514 |
| DraIII | CACNNNGTG | 1 cut(s) | 403 |
| EaeI | YGGCCR | 1 cut(s) | 337 |
| Eam1104I | CTCTTC | 1 cut(s) | 890 |
| EarI | CTCTTC | 1 cut(s) | 890 |
| Eco130I | CCWWGG | 1 cut(s) | 509 |
| Eco147I | AGGCCT | 2 cut(s) | 708, 873 |
| Eco47I | GGWCC | 1 cut(s) | 52 |
| Eco57I | CTGAAG | 1 cut(s) | 849 |
| EcoRI | GAATTC | 1 cut(s) | 1096 |
| EcoRII | CCWGG | 1 cut(s) | 682 |
| EcoT14I | CCWWGG | 1 cut(s) | 509 |
| EcoT22I | ATGCAT | 2 cut(s) | 45, 505 |
| ErhI | CCWWGG | 1 cut(s) | 509 |
| FaeI | CATG | 7 cut(s) | 47, 76, 152, 320, 503, 799, 907 |
| FatI | CATG | 7 cut(s) | 43, 72, 148, 316, 499, 795, 903 |
| FauI | CCCGC | 1 cut(s) | 42 |
| FbaI | TGATCA | 1 cut(s) | 433 |
| Fnu4HI | GCNGC | 5 cut(s) | 135, 258, 450, 666, 669 |
| FokI | GGATG | 1 cut(s) | 1024 |
| Fsp4HI | GCNGC | 5 cut(s) | 135, 258, 450, 666, 669 |
| GluI | GCNGC | 5 cut(s) | 135, 258, 450, 666, 669 |
| HaeIII | GGCC | 3 cut(s) | 339, 708, 873 |
| Hin1II | CATG | 7 cut(s) | 47, 76, 152, 320, 503, 799, 907 |
| HindIII | AAGCTT | 1 cut(s) | 241 |
| HinfI | GANTC | 4 cut(s) | 12, 194, 521, 568 |
| HphI | GGTGA | 2 cut(s) | 643, 871 |
| Hpy166II | GTNNAC | 1 cut(s) | 529 |
| Hpy188I | TCNGA | 2 cut(s) | 757, 829 |
| Hpy188III | TCNNGA | 3 cut(s) | 485, 518, 1009 |
| Hpy8I | GTNNAC | 1 cut(s) | 529 |
| Hpy99I | CGWCG | 1 cut(s) | 273 |
| HpyAV | CCTTC | 3 cut(s) | 601, 719, 1012 |
| HpyCH4III | ACNGT | 8 cut(s) | 60, 126, 344, 403, 477, 631, 679, 961 |
| HpyCH4IV | ACGT | 1 cut(s) | 820 |
| HpyF3I | CTNAG | 1 cut(s) | 7 |
| HpySE526I | ACGT | 1 cut(s) | 820 |
| Hsp92II | CATG | 7 cut(s) | 47, 76, 152, 320, 503, 799, 907 |
| Ksp22I | TGATCA | 1 cut(s) | 433 |
| Kzo9I | GATC | 2 cut(s) | 433, 514 |
| LpnPI | CCDG | 8 cut(s) | 222, 470, 669, 690, 696, 994, 997, 1005 |
| Lsp1109I | GCAGC | 4 cut(s) | 146, 461, 652, 680 |
| LweI | GCATC | 3 cut(s) | 30, 748, 1002 |
| MaeII | ACGT | 1 cut(s) | 820 |
| MaeIII | GTNAC | 4 cut(s) | 215, 312, 423, 649 |
| MalI | GATC | 2 cut(s) | 435, 516 |
| MbiI | CCGCTC | 1 cut(s) | 49 |
| MboI | GATC | 2 cut(s) | 433, 514 |
| MboII | GAAGA | 3 cut(s) | 768, 842, 877 |
| MhlI | GDGCHC | 2 cut(s) | 643, 928 |
| MlsI | TGGCCA | 1 cut(s) | 339 |
| MluCI | AATT | 7 cut(s) | 35, 182, 252, 373, 716, 1016, 1096 |
| MluNI | TGGCCA | 1 cut(s) | 339 |
| MlyI | GAGTC | 1 cut(s) | 203 |
| MmeI | TCCRAC | 1 cut(s) | 79 |
| MnlI | CCTC | 7 cut(s) | 80, 137, 437, 481, 583, 893, 1009 |
| Mox20I | TGGCCA | 1 cut(s) | 339 |
| Mph1103I | ATGCAT | 2 cut(s) | 45, 505 |
| MscI | TGGCCA | 1 cut(s) | 339 |
| MseI | TTAA | 4 cut(s) | 114, 185, 722, 1117 |
| MslI | CAYNNNNRTG | 5 cut(s) | 24, 656, 860, 905, 1010 |
| Msp20I | TGGCCA | 1 cut(s) | 339 |
| MspA1I | CMGCKG | 1 cut(s) | 260 |
| MspR9I | CCNGG | 1 cut(s) | 684 |
| Mva1269I | GAATGC | 2 cut(s) | 671, 807 |
| MvaI | CCWGG | 1 cut(s) | 684 |
| NdeII | GATC | 2 cut(s) | 433, 514 |
| NlaIII | CATG | 7 cut(s) | 47, 76, 152, 320, 503, 799, 907 |
| NlaIV | GGNNCC | 1 cut(s) | 53 |
| NmuCI | GTSAC | 2 cut(s) | 423, 649 |
| NsiI | ATGCAT | 2 cut(s) | 45, 505 |
| NspI | RCATGY | 1 cut(s) | 152 |
| PceI | AGGCCT | 2 cut(s) | 708, 873 |
| PctI | GAATGC | 2 cut(s) | 671, 807 |
| PfeI | GAWTC | 3 cut(s) | 12, 521, 568 |
| PkrI | GCNGC | 5 cut(s) | 136, 259, 451, 667, 670 |
| PleI | GAGTC | 1 cut(s) | 202 |
| PpsI | GAGTC | 1 cut(s) | 202 |
| PsiI | TTATAA | 1 cut(s) | 285 |
| Psp6I | CCWGG | 1 cut(s) | 682 |
| PspGI | CCWGG | 1 cut(s) | 682 |
| PspN4I | GGNNCC | 1 cut(s) | 53 |
| PspPI | GGNCC | 1 cut(s) | 52 |
| PstI | CTGCAG | 1 cut(s) | 670 |
| RsaI | GTAC | 1 cut(s) | 628 |
| RsaNI | GTAC | 1 cut(s) | 627 |
| RseI | CAYNNNNRTG | 5 cut(s) | 24, 656, 860, 905, 1010 |
| SaqAI | TTAA | 4 cut(s) | 114, 185, 722, 1117 |
| SatI | GCNGC | 5 cut(s) | 135, 258, 450, 666, 669 |
| Sau3AI | GATC | 2 cut(s) | 433, 514 |
| Sau96I | GGNCC | 1 cut(s) | 52 |
| SchI | GAGTC | 1 cut(s) | 203 |
| ScrFI | CCNGG | 1 cut(s) | 684 |
| SduI | GDGCHC | 2 cut(s) | 643, 928 |
| SfaNI | GCATC | 3 cut(s) | 30, 748, 1002 |
| SfcI | CTRYAG | 3 cut(s) | 172, 473, 666 |
| SinI | GGWCC | 1 cut(s) | 52 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 24, 656, 860, 905, 1010 |
| Sse9I | AATT | 7 cut(s) | 35, 182, 252, 373, 716, 1016, 1096 |
| SseBI | AGGCCT | 2 cut(s) | 708, 873 |
| SsiI | CCGC | 3 cut(s) | 49, 258, 841 |
| SspI | AATATT | 1 cut(s) | 1065 |
| StuI | AGGCCT | 2 cut(s) | 708, 873 |
| StyD4I | CCNGG | 1 cut(s) | 682 |
| StyI | CCWWGG | 1 cut(s) | 509 |
| TaaI | ACNGT | 8 cut(s) | 60, 126, 344, 403, 477, 631, 679, 961 |
| TaiI | ACGT | 1 cut(s) | 823 |
| TaqI | TCGA | 2 cut(s) | 442, 956 |
| TasI | AATT | 7 cut(s) | 35, 182, 252, 373, 716, 1016, 1096 |
| TatI | WGTACW | 1 cut(s) | 626 |
| TauI | GCSGC | 1 cut(s) | 260 |
| TfiI | GAWTC | 3 cut(s) | 12, 521, 568 |
| Tru1I | TTAA | 4 cut(s) | 114, 185, 722, 1117 |
| Tru9I | TTAA | 4 cut(s) | 114, 185, 722, 1117 |
| TscAI | CASTG | 3 cut(s) | 129, 408, 482 |
| TseFI | GTSAC | 2 cut(s) | 423, 649 |
| TseI | GCWGC | 4 cut(s) | 134, 449, 665, 668 |
| Tsp45I | GTSAC | 2 cut(s) | 423, 649 |
| TspDTI | ATGAA | 9 cut(s) | 17, 47, 114, 195, 333, 620, 711, 994, 1030 |
| TspGWI | ACGGA | 1 cut(s) | 1011 |
| TspRI | CASTG | 3 cut(s) | 129, 408, 482 |
| VpaK11BI | GGWCC | 1 cut(s) | 52 |
| XapI | RAATTY | 2 cut(s) | 716, 1096 |
| XceI | RCATGY | 1 cut(s) | 152 |
| Zsp2I | ATGCAT | 2 cut(s) | 45, 505 |