protein ubiquitination
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 463 |
| AccI | GTMKAC | 2 cut(s) | 141, 467 |
| AcsI | RAATTY | 2 cut(s) | 37, 225 |
| AfaI | GTAC | 2 cut(s) | 46, 242 |
| AgsI | TTSAA | 3 cut(s) | 157, 207, 297 |
| AjiI | CACGTC | 1 cut(s) | 234 |
| AjnI | CCWGG | 2 cut(s) | 100, 478 |
| AluBI | AGCT | 2 cut(s) | 18, 151 |
| AluI | AGCT | 2 cut(s) | 18, 151 |
| Alw21I | GWGCWC | 1 cut(s) | 61 |
| Alw26I | GTCTC | 1 cut(s) | 449 |
| ApeKI | GCWGC | 3 cut(s) | 8, 83, 86 |
| ApoI | RAATTY | 2 cut(s) | 37, 225 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 254 |
| AspS9I | GGNCC | 1 cut(s) | 476 |
| AsuC2I | CCSGG | 1 cut(s) | 518 |
| AsuHPI | GGTGA | 1 cut(s) | 409 |
| AvaII | GGWCC | 1 cut(s) | 476 |
| BaeGI | GKGCMC | 1 cut(s) | 346 |
| Bbv12I | GWGCWC | 1 cut(s) | 61 |
| BbvI | GCAGC | 3 cut(s) | 20, 70, 98 |
| BccI | CCATC | 1 cut(s) | 349 |
| BciT130I | CCWGG | 2 cut(s) | 102, 480 |
| BcnI | CCSGG | 1 cut(s) | 518 |
| BcoDI | GTCTC | 1 cut(s) | 449 |
| BfaI | CTAG | 1 cut(s) | 544 |
| BfmI | CTRYAG | 1 cut(s) | 84 |
| BisI | GCNGC | 3 cut(s) | 9, 84, 87 |
| BlsI | GCNGC | 3 cut(s) | 10, 85, 88 |
| Bme1390I | CCNGG | 3 cut(s) | 102, 480, 518 |
| Bme18I | GGWCC | 1 cut(s) | 476 |
| BmgBI | CACGTC | 1 cut(s) | 234 |
| BmgT120I | GGNCC | 1 cut(s) | 476 |
| BmrFI | CCNGG | 3 cut(s) | 102, 480, 518 |
| BmsI | GCATC | 4 cut(s) | 166, 352, 423, 511 |
| BpuMI | CCSGG | 1 cut(s) | 518 |
| Bse1I | ACTGG | 1 cut(s) | 413 |
| BseBI | CCWGG | 2 cut(s) | 102, 480 |
| BseGI | GGATG | 3 cut(s) | 440, 513, 526 |
| BseMII | CTCAG | 1 cut(s) | 258 |
| BseNI | ACTGG | 1 cut(s) | 413 |
| BseSI | GKGCMC | 1 cut(s) | 346 |
| BseXI | GCAGC | 3 cut(s) | 20, 70, 98 |
| BsiHKAI | GWGCWC | 1 cut(s) | 61 |
| BsiSI | CCGG | 1 cut(s) | 518 |
| BsmAI | GTCTC | 1 cut(s) | 449 |
| Bsp1286I | GDGCHC | 2 cut(s) | 61, 346 |
| Bsp143I | GATC | 2 cut(s) | 327, 510 |
| BspCNI | CTCAG | 1 cut(s) | 257 |
| BspMAI | CTGCAG | 1 cut(s) | 88 |
| BsrI | ACTGG | 1 cut(s) | 413 |
| BssMI | GATC | 2 cut(s) | 327, 510 |
| Bst2UI | CCWGG | 2 cut(s) | 102, 480 |
| Bst4CI | ACNGT | 3 cut(s) | 49, 409, 507 |
| Bst6I | CTCTTC | 1 cut(s) | 379 |
| BstC8I | GCNNGC | 1 cut(s) | 402 |
| BstDEI | CTNAG | 1 cut(s) | 244 |
| BstF5I | GGATG | 3 cut(s) | 440, 513, 526 |
| BstKTI | GATC | 2 cut(s) | 330, 513 |
| BstMAI | GTCTC | 1 cut(s) | 449 |
| BstMBI | GATC | 2 cut(s) | 327, 510 |
| BstNI | CCWGG | 2 cut(s) | 102, 480 |
| BstSCI | CCNGG | 3 cut(s) | 100, 478, 516 |
| BstSFI | CTRYAG | 1 cut(s) | 84 |
| BstSLI | GKGCMC | 1 cut(s) | 346 |
| BstV1I | GCAGC | 3 cut(s) | 20, 70, 98 |
| BtrI | CACGTC | 1 cut(s) | 234 |
| BtsCI | GGATG | 3 cut(s) | 440, 513, 526 |
| BtsI | GCAGTG | 1 cut(s) | 531 |
| BtsIMutI | CAGTG | 1 cut(s) | 531 |
| Cac8I | GCNNGC | 1 cut(s) | 402 |
| Cfr13I | GGNCC | 1 cut(s) | 476 |
| Csp6I | GTAC | 2 cut(s) | 45, 241 |
| CviAII | CATG | 4 cut(s) | 22, 42, 133, 322 |
| CviJI | RGCY | 5 cut(s) | 11, 18, 29, 126, 151 |
| CviKI_1 | RGCY | 5 cut(s) | 11, 18, 29, 126, 151 |
| CviQI | GTAC | 2 cut(s) | 45, 241 |
| DdeI | CTNAG | 1 cut(s) | 244 |
| DpnI | GATC | 2 cut(s) | 329, 512 |
| DpnII | GATC | 2 cut(s) | 327, 510 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 463 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 463 |
| Eam1104I | CTCTTC | 1 cut(s) | 379 |
| EarI | CTCTTC | 1 cut(s) | 379 |
| Eco47I | GGWCC | 1 cut(s) | 476 |
| EcoRI | GAATTC | 1 cut(s) | 225 |
| EcoRII | CCWGG | 2 cut(s) | 100, 478 |
| FaeI | CATG | 4 cut(s) | 25, 45, 136, 325 |
| FatI | CATG | 4 cut(s) | 21, 41, 132, 321 |
| FauNDI | CATATG | 1 cut(s) | 472 |
| FblI | GTMKAC | 2 cut(s) | 141, 467 |
| Fnu4HI | GCNGC | 3 cut(s) | 9, 84, 87 |
| FokI | GGATG | 3 cut(s) | 427, 500, 533 |
| Fsp4HI | GCNGC | 3 cut(s) | 9, 84, 87 |
| FspBI | CTAG | 1 cut(s) | 544 |
| GluI | GCNGC | 3 cut(s) | 9, 84, 87 |
| HapII | CCGG | 1 cut(s) | 518 |
| Hin1II | CATG | 4 cut(s) | 25, 45, 136, 325 |
| HpaII | CCGG | 1 cut(s) | 518 |
| HphI | GGTGA | 1 cut(s) | 409 |
| Hpy166II | GTNNAC | 2 cut(s) | 142, 468 |
| Hpy188I | TCNGA | 2 cut(s) | 175, 247 |
| Hpy8I | GTNNAC | 2 cut(s) | 142, 468 |
| Hpy99I | CGWCG | 1 cut(s) | 511 |
| HpyCH4III | ACNGT | 3 cut(s) | 49, 409, 507 |
| HpyCH4IV | ACGT | 1 cut(s) | 233 |
| HpyCH4V | TGCA | 4 cut(s) | 86, 436, 524, 529 |
| HpyF3I | CTNAG | 1 cut(s) | 244 |
| HpySE526I | ACGT | 1 cut(s) | 233 |
| Hsp92II | CATG | 4 cut(s) | 25, 45, 136, 325 |
| Kzo9I | GATC | 2 cut(s) | 327, 510 |
| LmnI | GCTCC | 1 cut(s) | 23 |
| LpnPI | CCDG | 9 cut(s) | 87, 108, 114, 222, 426, 465, 478, 492, 531 |
| Lsp1109I | GCAGC | 3 cut(s) | 20, 70, 98 |
| LweI | GCATC | 4 cut(s) | 166, 352, 423, 511 |
| MaeI | CTAG | 1 cut(s) | 544 |
| MaeII | ACGT | 1 cut(s) | 233 |
| MaeIII | GTNAC | 2 cut(s) | 67, 415 |
| MalI | GATC | 2 cut(s) | 329, 512 |
| MboI | GATC | 2 cut(s) | 327, 510 |
| MboII | GAAGA | 2 cut(s) | 298, 366 |
| MhlI | GDGCHC | 2 cut(s) | 61, 346 |
| MluCI | AATT | 4 cut(s) | 37, 210, 225, 498 |
| MnlI | CCTC | 3 cut(s) | 269, 430, 455 |
| MroXI | GAANNNNTTC | 1 cut(s) | 254 |
| MseI | TTAA | 1 cut(s) | 501 |
| MslI | CAYNNNNRTG | 1 cut(s) | 278 |
| MspI | CCGG | 1 cut(s) | 518 |
| MspR9I | CCNGG | 3 cut(s) | 102, 480, 518 |
| MvaI | CCWGG | 2 cut(s) | 102, 480 |
| NciI | CCSGG | 1 cut(s) | 518 |
| NdeI | CATATG | 1 cut(s) | 472 |
| NdeII | GATC | 2 cut(s) | 327, 510 |
| NlaIII | CATG | 4 cut(s) | 25, 45, 136, 325 |
| NmuCI | GTSAC | 1 cut(s) | 415 |
| PdmI | GAANNNNTTC | 1 cut(s) | 254 |
| PfoI | TCCNGGA | 1 cut(s) | 516 |
| PkrI | GCNGC | 3 cut(s) | 10, 85, 88 |
| Psp6I | CCWGG | 2 cut(s) | 100, 478 |
| PspGI | CCWGG | 2 cut(s) | 100, 478 |
| PspPI | GGNCC | 1 cut(s) | 476 |
| PstI | CTGCAG | 1 cut(s) | 88 |
| RsaI | GTAC | 2 cut(s) | 46, 242 |
| RsaNI | GTAC | 2 cut(s) | 45, 241 |
| RseI | CAYNNNNRTG | 1 cut(s) | 278 |
| SaqAI | TTAA | 1 cut(s) | 501 |
| SatI | GCNGC | 3 cut(s) | 9, 84, 87 |
| Sau3AI | GATC | 2 cut(s) | 327, 510 |
| Sau96I | GGNCC | 1 cut(s) | 476 |
| ScrFI | CCNGG | 3 cut(s) | 102, 480, 518 |
| SduI | GDGCHC | 2 cut(s) | 61, 346 |
| SetI | ASST | 7 cut(s) | 20, 153, 162, 236, 292, 422, 481 |
| SfaNI | GCATC | 4 cut(s) | 166, 352, 423, 511 |
| SfcI | CTRYAG | 1 cut(s) | 84 |
| SinI | GGWCC | 1 cut(s) | 476 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 278 |
| Sse9I | AATT | 4 cut(s) | 37, 210, 225, 498 |
| SspI | AATATT | 1 cut(s) | 486 |
| SspMI | CTAG | 1 cut(s) | 544 |
| StyD4I | CCNGG | 3 cut(s) | 100, 478, 516 |
| TaaI | ACNGT | 3 cut(s) | 49, 409, 507 |
| TaiI | ACGT | 1 cut(s) | 236 |
| TaqI | TCGA | 1 cut(s) | 509 |
| TasI | AATT | 4 cut(s) | 37, 210, 225, 498 |
| TatI | WGTACW | 1 cut(s) | 44 |
| Tru1I | TTAA | 1 cut(s) | 501 |
| Tru9I | TTAA | 1 cut(s) | 501 |
| TscAI | CASTG | 1 cut(s) | 531 |
| TseFI | GTSAC | 1 cut(s) | 415 |
| TseI | GCWGC | 3 cut(s) | 8, 83, 86 |
| Tsp45I | GTSAC | 1 cut(s) | 415 |
| TspDTI | ATGAA | 6 cut(s) | 17, 30, 38, 154, 374, 527 |
| TspRI | CASTG | 1 cut(s) | 531 |
| VpaK11BI | GGWCC | 1 cut(s) | 476 |
| XapI | RAATTY | 2 cut(s) | 37, 225 |
| XmiI | GTMKAC | 2 cut(s) | 141, 467 |
| XmnI | GAANNNNTTC | 1 cut(s) | 254 |
| XspI | CTAG | 1 cut(s) | 544 |