protein ubiquitination
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| PGG | PF13962 | 132 - 238 | 6.6e-17 | Domain of unknown function |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 96 |
| AccII | CGCG | 1 cut(s) | 246 |
| AciI | CCGC | 4 cut(s) | 371, 465, 857, 890 |
| AcsI | RAATTY | 2 cut(s) | 90, 299 |
| AcvI | CACGTG | 1 cut(s) | 329 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 387 |
| AgeI | ACCGGT | 1 cut(s) | 482 |
| AgsI | TTSAA | 6 cut(s) | 62, 74, 221, 262, 315, 517 |
| AjiI | CACGTC | 1 cut(s) | 594 |
| AjnI | CCWGG | 1 cut(s) | 460 |
| AluBI | AGCT | 3 cut(s) | 112, 398, 458 |
| AluI | AGCT | 3 cut(s) | 112, 398, 458 |
| Alw21I | GWGCWC | 1 cut(s) | 421 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 461 |
| AoxI | GGCC | 1 cut(s) | 649 |
| ApeKI | GCWGC | 2 cut(s) | 182, 395 |
| ApoI | RAATTY | 2 cut(s) | 90, 299 |
| AsiGI | ACCGGT | 1 cut(s) | 482 |
| AspS9I | GGNCC | 1 cut(s) | 833 |
| AvaII | GGWCC | 1 cut(s) | 833 |
| BaeGI | GKGCMC | 2 cut(s) | 706, 896 |
| BbrPI | CACGTG | 1 cut(s) | 329 |
| BbsI | GAAGAC | 2 cut(s) | 479, 615 |
| Bbv12I | GWGCWC | 1 cut(s) | 421 |
| BbvI | GCAGC | 2 cut(s) | 194, 407 |
| BciT130I | CCWGG | 1 cut(s) | 462 |
| BclI | TGATCA | 1 cut(s) | 687 |
| BfaI | CTAG | 2 cut(s) | 113, 285 |
| BfmI | CTRYAG | 1 cut(s) | 444 |
| BisI | GCNGC | 2 cut(s) | 183, 396 |
| BlsI | GCNGC | 2 cut(s) | 184, 397 |
| Bme1390I | CCNGG | 1 cut(s) | 462 |
| Bme18I | GGWCC | 1 cut(s) | 833 |
| BmgBI | CACGTC | 1 cut(s) | 594 |
| BmgT120I | GGNCC | 1 cut(s) | 833 |
| BmiI | GGNNCC | 1 cut(s) | 626 |
| BmrFI | CCNGG | 1 cut(s) | 462 |
| BmrI | ACTGGG | 1 cut(s) | 191 |
| BmsI | GCATC | 1 cut(s) | 812 |
| BmuI | ACTGGG | 1 cut(s) | 191 |
| BpiI | GAAGAC | 2 cut(s) | 479, 615 |
| BsaAI | YACGTR | 1 cut(s) | 329 |
| BsaWI | WCCGGW | 2 cut(s) | 482, 745 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 263, 293 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 387 |
| Bse118I | RCCGGY | 1 cut(s) | 482 |
| Bse1I | ACTGG | 1 cut(s) | 197 |
| BseBI | CCWGG | 1 cut(s) | 462 |
| BseGI | GGATG | 1 cut(s) | 370 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 387 |
| BseMII | CTCAG | 1 cut(s) | 546 |
| BseNI | ACTGG | 1 cut(s) | 197 |
| BseSI | GKGCMC | 2 cut(s) | 706, 896 |
| BseXI | GCAGC | 2 cut(s) | 194, 407 |
| BsgI | GTGCAG | 1 cut(s) | 201 |
| Bsh1236I | CGCG | 1 cut(s) | 246 |
| BshFI | GGCC | 1 cut(s) | 651 |
| BshTI | ACCGGT | 1 cut(s) | 482 |
| BsiHKAI | GWGCWC | 1 cut(s) | 421 |
| BsiSI | CCGG | 2 cut(s) | 483, 746 |
| BslFI | GGGAC | 1 cut(s) | 597 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 387 |
| BsmFI | GGGAC | 1 cut(s) | 597 |
| BsmI | GAATGC | 1 cut(s) | 449 |
| BsnI | GGCC | 1 cut(s) | 651 |
| Bsp1286I | GDGCHC | 3 cut(s) | 421, 706, 896 |
| Bsp143I | GATC | 2 cut(s) | 687, 873 |
| BspACI | CCGC | 4 cut(s) | 371, 465, 857, 890 |
| BspANI | GGCC | 1 cut(s) | 651 |
| BspCNI | CTCAG | 1 cut(s) | 545 |
| BspFNI | CGCG | 1 cut(s) | 246 |
| BspLI | GGNNCC | 1 cut(s) | 626 |
| BsrFI | RCCGGY | 1 cut(s) | 482 |
| BsrI | ACTGG | 1 cut(s) | 197 |
| BssAI | RCCGGY | 1 cut(s) | 482 |
| BssMI | GATC | 2 cut(s) | 687, 873 |
| Bst2UI | CCWGG | 1 cut(s) | 462 |
| Bst4CI | ACNGT | 3 cut(s) | 156, 412, 766 |
| BstBAI | YACGTR | 1 cut(s) | 329 |
| BstC8I | GCNNGC | 3 cut(s) | 120, 859, 892 |
| BstDEI | CTNAG | 1 cut(s) | 532 |
| BstF5I | GGATG | 1 cut(s) | 370 |
| BstFNI | CGCG | 1 cut(s) | 246 |
| BstKTI | GATC | 2 cut(s) | 690, 876 |
| BstMBI | GATC | 2 cut(s) | 687, 873 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 455 |
| BstNI | CCWGG | 1 cut(s) | 462 |
| BstSCI | CCNGG | 1 cut(s) | 460 |
| BstSFI | CTRYAG | 1 cut(s) | 444 |
| BstSLI | GKGCMC | 2 cut(s) | 706, 896 |
| BstUI | CGCG | 1 cut(s) | 246 |
| BstV1I | GCAGC | 2 cut(s) | 194, 407 |
| BstV2I | GAAGAC | 2 cut(s) | 479, 615 |
| BsuRI | GGCC | 1 cut(s) | 651 |
| BtrI | CACGTC | 1 cut(s) | 594 |
| BtsCI | GGATG | 1 cut(s) | 370 |
| Cac8I | GCNNGC | 3 cut(s) | 120, 859, 892 |
| CaiI | CAGNNNCTG | 1 cut(s) | 461 |
| Cfr10I | RCCGGY | 1 cut(s) | 482 |
| Cfr13I | GGNCC | 1 cut(s) | 833 |
| CspAI | ACCGGT | 1 cut(s) | 482 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 6, 41 |
| CviAII | CATG | 3 cut(s) | 296, 382, 682 |
| CviJI | RGCY | 4 cut(s) | 112, 398, 458, 651 |
| CviKI_1 | RGCY | 4 cut(s) | 112, 398, 458, 651 |
| DdeI | CTNAG | 1 cut(s) | 532 |
| DpnI | GATC | 2 cut(s) | 689, 875 |
| DpnII | GATC | 2 cut(s) | 687, 873 |
| EciI | GGCGGA | 1 cut(s) | 480 |
| Eco147I | AGGCCT | 1 cut(s) | 651 |
| Eco32I | GATATC | 1 cut(s) | 31 |
| Eco47I | GGWCC | 1 cut(s) | 833 |
| Eco72I | CACGTG | 1 cut(s) | 329 |
| EcoRI | GAATTC | 1 cut(s) | 299 |
| EcoRII | CCWGG | 1 cut(s) | 460 |
| EcoRV | GATATC | 1 cut(s) | 31 |
| EcoT22I | ATGCAT | 3 cut(s) | 144, 297, 504 |
| FaeI | CATG | 3 cut(s) | 299, 385, 685 |
| FaqI | GGGAC | 1 cut(s) | 597 |
| FatI | CATG | 3 cut(s) | 295, 381, 681 |
| FauI | CCCGC | 2 cut(s) | 850, 883 |
| FauNDI | CATATG | 1 cut(s) | 601 |
| FbaI | TGATCA | 1 cut(s) | 687 |
| Fnu4HI | GCNGC | 2 cut(s) | 183, 396 |
| FokI | GGATG | 1 cut(s) | 377 |
| Fsp4HI | GCNGC | 2 cut(s) | 183, 396 |
| FspBI | CTAG | 2 cut(s) | 113, 285 |
| GluI | GCNGC | 2 cut(s) | 183, 396 |
| HaeIII | GGCC | 1 cut(s) | 651 |
| HapII | CCGG | 2 cut(s) | 483, 746 |
| Hin1II | CATG | 3 cut(s) | 299, 385, 685 |
| HincII | GTYRAC | 1 cut(s) | 597 |
| HindII | GTYRAC | 1 cut(s) | 597 |
| HpaII | CCGG | 2 cut(s) | 483, 746 |
| Hpy166II | GTNNAC | 2 cut(s) | 332, 597 |
| Hpy188I | TCNGA | 2 cut(s) | 162, 535 |
| Hpy188III | TCNNGA | 2 cut(s) | 83, 517 |
| Hpy8I | GTNNAC | 2 cut(s) | 332, 597 |
| Hpy99I | CGWCG | 1 cut(s) | 776 |
| HpyAV | CCTTC | 1 cut(s) | 846 |
| HpyCH4III | ACNGT | 3 cut(s) | 156, 412, 766 |
| HpyCH4IV | ACGT | 4 cut(s) | 328, 575, 593, 692 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 455 |
| HpyF3I | CTNAG | 1 cut(s) | 532 |
| HpySE526I | ACGT | 4 cut(s) | 328, 575, 593, 692 |
| Hsp92II | CATG | 3 cut(s) | 299, 385, 685 |
| Ksp22I | TGATCA | 1 cut(s) | 687 |
| Kzo9I | GATC | 2 cut(s) | 687, 873 |
| LmnI | GCTCC | 1 cut(s) | 463 |
| LpnPI | CCDG | 5 cut(s) | 210, 447, 474, 496, 759 |
| Lsp1109I | GCAGC | 2 cut(s) | 194, 407 |
| LweI | GCATC | 1 cut(s) | 812 |
| MaeI | CTAG | 2 cut(s) | 113, 285 |
| MaeII | ACGT | 4 cut(s) | 328, 575, 593, 692 |
| MaeIII | GTNAC | 3 cut(s) | 199, 427, 476 |
| MalI | GATC | 2 cut(s) | 689, 875 |
| MboI | GATC | 2 cut(s) | 687, 873 |
| MboII | GAAGA | 6 cut(s) | 61, 143, 393, 479, 546, 620 |
| MhlI | GDGCHC | 3 cut(s) | 421, 706, 896 |
| MluCI | AATT | 7 cut(s) | 90, 299, 356, 570, 638, 741, 786 |
| MnlI | CCTC | 3 cut(s) | 259, 679, 812 |
| Mph1103I | ATGCAT | 3 cut(s) | 144, 297, 504 |
| MseI | TTAA | 2 cut(s) | 210, 359 |
| MspI | CCGG | 2 cut(s) | 483, 746 |
| MspR9I | CCNGG | 1 cut(s) | 462 |
| Mva1269I | GAATGC | 1 cut(s) | 449 |
| MvaI | CCWGG | 1 cut(s) | 462 |
| MvnI | CGCG | 1 cut(s) | 246 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 455 |
| NdeI | CATATG | 1 cut(s) | 601 |
| NdeII | GATC | 2 cut(s) | 687, 873 |
| NlaIII | CATG | 3 cut(s) | 299, 385, 685 |
| NlaIV | GGNNCC | 1 cut(s) | 626 |
| NsiI | ATGCAT | 3 cut(s) | 144, 297, 504 |
| PceI | AGGCCT | 1 cut(s) | 651 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 572 |
| PctI | GAATGC | 1 cut(s) | 449 |
| PinAI | ACCGGT | 1 cut(s) | 482 |
| PkrI | GCNGC | 2 cut(s) | 184, 397 |
| PmaCI | CACGTG | 1 cut(s) | 329 |
| PmlI | CACGTG | 1 cut(s) | 329 |
| Ppu21I | YACGTR | 1 cut(s) | 329 |
| PsiI | TTATAA | 1 cut(s) | 96 |
| Psp6I | CCWGG | 1 cut(s) | 460 |
| PspCI | CACGTG | 1 cut(s) | 329 |
| PspGI | CCWGG | 1 cut(s) | 460 |
| PspN4I | GGNNCC | 1 cut(s) | 626 |
| PspPI | GGNCC | 1 cut(s) | 833 |
| PstNI | CAGNNNCTG | 1 cut(s) | 461 |
| SaqAI | TTAA | 2 cut(s) | 210, 359 |
| SatI | GCNGC | 2 cut(s) | 183, 396 |
| Sau3AI | GATC | 2 cut(s) | 687, 873 |
| Sau96I | GGNCC | 1 cut(s) | 833 |
| ScrFI | CCNGG | 1 cut(s) | 462 |
| SduI | GDGCHC | 3 cut(s) | 421, 706, 896 |
| SfaNI | GCATC | 1 cut(s) | 812 |
| SfcI | CTRYAG | 1 cut(s) | 444 |
| SinI | GGWCC | 1 cut(s) | 833 |
| Sse9I | AATT | 7 cut(s) | 90, 299, 356, 570, 638, 741, 786 |
| SseBI | AGGCCT | 1 cut(s) | 651 |
| SsiI | CCGC | 4 cut(s) | 371, 465, 857, 890 |
| SspI | AATATT | 1 cut(s) | 100 |
| SspMI | CTAG | 2 cut(s) | 113, 285 |
| StuI | AGGCCT | 1 cut(s) | 651 |
| StyD4I | CCNGG | 1 cut(s) | 460 |
| TaaI | ACNGT | 3 cut(s) | 156, 412, 766 |
| TaiI | ACGT | 4 cut(s) | 331, 578, 596, 695 |
| TaqI | TCGA | 2 cut(s) | 839, 872 |
| TasI | AATT | 7 cut(s) | 90, 299, 356, 570, 638, 741, 786 |
| Tru1I | TTAA | 2 cut(s) | 210, 359 |
| Tru9I | TTAA | 2 cut(s) | 210, 359 |
| TseI | GCWGC | 2 cut(s) | 182, 395 |
| TspDTI | ATGAA | 3 cut(s) | 312, 381, 398 |
| TspGWI | ACGGA | 1 cut(s) | 738 |
| VpaK11BI | GGWCC | 1 cut(s) | 833 |
| XapI | RAATTY | 2 cut(s) | 90, 299 |
| XspI | CTAG | 2 cut(s) | 113, 285 |
| Zsp2I | ATGCAT | 3 cut(s) | 144, 297, 504 |