protein ubiquitination
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 189 |
| AcsI | RAATTY | 3 cut(s) | 183, 379, 387 |
| AflIII | ACRYGT | 2 cut(s) | 73, 147 |
| AgsI | TTSAA | 4 cut(s) | 56, 167, 355, 385 |
| AluBI | AGCT | 2 cut(s) | 33, 301 |
| AluI | AGCT | 2 cut(s) | 33, 301 |
| ApeKI | GCWGC | 2 cut(s) | 272, 320 |
| ApoI | RAATTY | 3 cut(s) | 183, 379, 387 |
| BbvI | GCAGC | 2 cut(s) | 284, 332 |
| BceAI | ACGGC | 2 cut(s) | 44, 146 |
| BclI | TGATCA | 1 cut(s) | 16 |
| BfaI | CTAG | 1 cut(s) | 216 |
| BfmI | CTRYAG | 1 cut(s) | 344 |
| BisI | GCNGC | 2 cut(s) | 273, 321 |
| BlsI | GCNGC | 2 cut(s) | 274, 322 |
| BmsI | GCATC | 2 cut(s) | 217, 321 |
| BsaJI | CCNNGG | 2 cut(s) | 118, 313 |
| Bse3DI | GCAATG | 1 cut(s) | 54 |
| BseDI | CCNNGG | 2 cut(s) | 118, 313 |
| BseMI | GCAATG | 1 cut(s) | 54 |
| BseRI | GAGGAG | 1 cut(s) | 107 |
| BseXI | GCAGC | 2 cut(s) | 284, 332 |
| BsgI | GTGCAG | 1 cut(s) | 339 |
| Bsp143I | GATC | 1 cut(s) | 16 |
| BspHI | TCATGA | 1 cut(s) | 127 |
| BsrDI | GCAATG | 1 cut(s) | 54 |
| BssECI | CCNNGG | 2 cut(s) | 118, 313 |
| BssMI | GATC | 1 cut(s) | 16 |
| BssT1I | CCWWGG | 1 cut(s) | 313 |
| Bst4CI | ACNGT | 1 cut(s) | 348 |
| Bst6I | CTCTTC | 1 cut(s) | 96 |
| BstKTI | GATC | 1 cut(s) | 19 |
| BstMBI | GATC | 1 cut(s) | 16 |
| BstNSI | RCATGY | 4 cut(s) | 77, 151, 265, 272 |
| BstSFI | CTRYAG | 1 cut(s) | 344 |
| BstV1I | GCAGC | 2 cut(s) | 284, 332 |
| BtsIMutI | CAGTG | 1 cut(s) | 353 |
| CciI | TCATGA | 1 cut(s) | 127 |
| CviAII | CATG | 6 cut(s) | 74, 128, 148, 200, 262, 269 |
| CviJI | RGCY | 4 cut(s) | 33, 59, 301, 323 |
| CviKI_1 | RGCY | 4 cut(s) | 33, 59, 301, 323 |
| DpnI | GATC | 1 cut(s) | 18 |
| DpnII | GATC | 1 cut(s) | 16 |
| Eam1104I | CTCTTC | 1 cut(s) | 96 |
| EarI | CTCTTC | 1 cut(s) | 96 |
| Eco130I | CCWWGG | 1 cut(s) | 313 |
| EcoT14I | CCWWGG | 1 cut(s) | 313 |
| ErhI | CCWWGG | 1 cut(s) | 313 |
| FaeI | CATG | 6 cut(s) | 77, 131, 151, 203, 265, 272 |
| FatI | CATG | 6 cut(s) | 73, 127, 147, 199, 261, 268 |
| FbaI | TGATCA | 1 cut(s) | 16 |
| Fnu4HI | GCNGC | 2 cut(s) | 273, 321 |
| Fsp4HI | GCNGC | 2 cut(s) | 273, 321 |
| FspBI | CTAG | 1 cut(s) | 216 |
| GluI | GCNGC | 2 cut(s) | 273, 321 |
| Hin1II | CATG | 6 cut(s) | 77, 131, 151, 203, 265, 272 |
| HindIII | AAGCTT | 1 cut(s) | 299 |
| HinfI | GANTC | 1 cut(s) | 212 |
| Hpy188I | TCNGA | 2 cut(s) | 111, 362 |
| Hpy188III | TCNNGA | 2 cut(s) | 128, 176 |
| HpyCH4III | ACNGT | 1 cut(s) | 348 |
| HpyCH4V | TGCA | 6 cut(s) | 40, 272, 296, 320, 334, 398 |
| Hsp92II | CATG | 6 cut(s) | 77, 131, 151, 203, 265, 272 |
| Ksp22I | TGATCA | 1 cut(s) | 16 |
| Kzo9I | GATC | 1 cut(s) | 16 |
| LpnPI | CCDG | 1 cut(s) | 261 |
| Lsp1109I | GCAGC | 2 cut(s) | 284, 332 |
| LweI | GCATC | 2 cut(s) | 217, 321 |
| MaeI | CTAG | 1 cut(s) | 216 |
| MalI | GATC | 1 cut(s) | 18 |
| MboI | GATC | 1 cut(s) | 16 |
| MboII | GAAGA | 2 cut(s) | 83, 191 |
| MluCI | AATT | 3 cut(s) | 183, 379, 387 |
| MnlI | CCTC | 3 cut(s) | 62, 128, 273 |
| NdeII | GATC | 1 cut(s) | 16 |
| NlaIII | CATG | 6 cut(s) | 77, 131, 151, 203, 265, 272 |
| NmeAIII | GCCGAG | 1 cut(s) | 99 |
| NspI | RCATGY | 4 cut(s) | 77, 151, 265, 272 |
| PagI | TCATGA | 1 cut(s) | 127 |
| PciI | ACATGT | 2 cut(s) | 73, 147 |
| PfeI | GAWTC | 1 cut(s) | 212 |
| PkrI | GCNGC | 2 cut(s) | 274, 322 |
| PscI | ACATGT | 2 cut(s) | 73, 147 |
| PsiI | TTATAA | 1 cut(s) | 189 |
| SatI | GCNGC | 2 cut(s) | 273, 321 |
| Sau3AI | GATC | 1 cut(s) | 16 |
| SetI | ASST | 5 cut(s) | 35, 195, 303, 319, 360 |
| SfaNI | GCATC | 2 cut(s) | 217, 321 |
| SfcI | CTRYAG | 1 cut(s) | 344 |
| Sse9I | AATT | 3 cut(s) | 183, 379, 387 |
| SspMI | CTAG | 1 cut(s) | 216 |
| StyI | CCWWGG | 1 cut(s) | 313 |
| TaaI | ACNGT | 1 cut(s) | 348 |
| TasI | AATT | 3 cut(s) | 183, 379, 387 |
| TfiI | GAWTC | 1 cut(s) | 212 |
| TscAI | CASTG | 1 cut(s) | 353 |
| TseI | GCWGC | 2 cut(s) | 272, 320 |
| TspDTI | ATGAA | 1 cut(s) | 116 |
| TspRI | CASTG | 1 cut(s) | 353 |
| XapI | RAATTY | 3 cut(s) | 183, 379, 387 |
| XceI | RCATGY | 4 cut(s) | 77, 151, 265, 272 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 238 |
| XspI | CTAG | 1 cut(s) | 216 |