protein ubiquitination
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| PGG | PF13962 | 576 - 691 | 1.5e-27 | Domain of unknown function |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1389 |
| Acc16I | TGCGCA | 2 cut(s) | 434, 1418 |
| Acc36I | ACCTGC | 1 cut(s) | 1832 |
| AccBSI | CCGCTC | 2 cut(s) | 707, 1162 |
| AccI | GTMKAC | 2 cut(s) | 795, 1872 |
| AciI | CCGC | 6 cut(s) | 77, 203, 705, 991, 1162, 1362 |
| AclI | AACGTT | 1 cut(s) | 859 |
| AclWI | GGATC | 2 cut(s) | 505, 1650 |
| AcoI | YGGCCR | 1 cut(s) | 383 |
| AcsI | RAATTY | 8 cut(s) | 29, 109, 139, 783, 970, 1383, 1557, 2220 |
| AfaI | GTAC | 3 cut(s) | 591, 748, 1756 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 631, 871, 2145 |
| AflIII | ACRYGT | 1 cut(s) | 1399 |
| AgsI | TTSAA | 5 cut(s) | 542, 940, 1571, 1649, 1967 |
| AhlI | ACTAGT | 1 cut(s) | 584 |
| AjiI | CACGTC | 1 cut(s) | 1953 |
| AjnI | CCWGG | 3 cut(s) | 354, 699, 1810 |
| AluBI | AGCT | 5 cut(s) | 398, 492, 503, 548, 1580 |
| AluI | AGCT | 5 cut(s) | 398, 492, 503, 548, 1580 |
| Alw21I | GWGCWC | 3 cut(s) | 254, 1407, 1771 |
| Alw26I | GTCTC | 1 cut(s) | 733 |
| Alw44I | GTGCAC | 1 cut(s) | 1403 |
| AlwI | GGATC | 2 cut(s) | 505, 1650 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1811 |
| AoxI | GGCC | 7 cut(s) | 383, 621, 702, 918, 1339, 2008, 2062 |
| ApaLI | GTGCAC | 1 cut(s) | 1403 |
| ApeKI | GCWGC | 7 cut(s) | 359, 426, 545, 1451, 1577, 1793, 1796 |
| ApoI | RAATTY | 8 cut(s) | 29, 109, 139, 783, 970, 1383, 1557, 2220 |
| AspLEI | GCGC | 3 cut(s) | 435, 1419, 1577 |
| AspS9I | GGNCC | 3 cut(s) | 622, 1165, 1844 |
| AsuHPI | GGTGA | 4 cut(s) | 1046, 1367, 1771, 2008 |
| AvaII | GGWCC | 2 cut(s) | 1165, 1844 |
| AxyI | CCTNAGG | 1 cut(s) | 1072 |
| BaeGI | GKGCMC | 1 cut(s) | 1407 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 573, 606 |
| BalI | TGGCCA | 1 cut(s) | 385 |
| BauI | CACGAG | 1 cut(s) | 617 |
| Bbv12I | GWGCWC | 3 cut(s) | 254, 1407, 1771 |
| BbvI | GCAGC | 7 cut(s) | 371, 438, 557, 1438, 1589, 1780, 1808 |
| BccI | CCATC | 3 cut(s) | 1019, 1555, 1790 |
| BceAI | ACGGC | 2 cut(s) | 648, 1356 |
| BciT130I | CCWGG | 3 cut(s) | 356, 701, 1812 |
| BciVI | GTATCC | 3 cut(s) | 78, 204, 998 |
| BclI | TGATCA | 3 cut(s) | 82, 208, 1236 |
| BcoDI | GTCTC | 1 cut(s) | 733 |
| BcuI | ACTAGT | 1 cut(s) | 584 |
| BfaI | CTAG | 5 cut(s) | 98, 224, 255, 585, 611 |
| BfmI | CTRYAG | 1 cut(s) | 1794 |
| BfuAI | ACCTGC | 1 cut(s) | 1832 |
| BfuI | GTATCC | 3 cut(s) | 78, 204, 998 |
| BisI | GCNGC | 9 cut(s) | 360, 427, 546, 705, 1362, 1452, 1578, 1794, 1797 |
| BlsI | GCNGC | 9 cut(s) | 361, 428, 547, 706, 1363, 1453, 1579, 1795, 1798 |
| Bme1390I | CCNGG | 3 cut(s) | 356, 701, 1812 |
| Bme18I | GGWCC | 2 cut(s) | 1165, 1844 |
| BmgBI | CACGTC | 1 cut(s) | 1953 |
| BmgT120I | GGNCC | 3 cut(s) | 622, 1165, 1844 |
| BmiI | GGNNCC | 2 cut(s) | 1166, 2213 |
| BmrFI | CCNGG | 3 cut(s) | 356, 701, 1812 |
| BmsI | GCATC | 7 cut(s) | 79, 205, 288, 1066, 1143, 1885, 2139 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 2075, 2107 |
| BpmI | CTGGAG | 1 cut(s) | 719 |
| BsaJI | CCNNGG | 5 cut(s) | 354, 625, 699, 1090, 1638 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 631, 871, 2145 |
| Bse1I | ACTGG | 3 cut(s) | 53, 179, 2129 |
| Bse21I | CCTNAGG | 1 cut(s) | 1072 |
| Bse3DI | GCAATG | 1 cut(s) | 240 |
| BseBI | CCWGG | 3 cut(s) | 356, 701, 1812 |
| BseDI | CCNNGG | 5 cut(s) | 354, 625, 699, 1090, 1638 |
| BseGI | GGATG | 4 cut(s) | 279, 349, 378, 2154 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 631, 871, 2145 |
| BseMI | GCAATG | 1 cut(s) | 240 |
| BseMII | CTCAG | 2 cut(s) | 239, 1086 |
| BseNI | ACTGG | 3 cut(s) | 53, 179, 2129 |
| BseRI | GAGGAG | 1 cut(s) | 273 |
| BseSI | GKGCMC | 1 cut(s) | 1407 |
| BseXI | GCAGC | 7 cut(s) | 371, 438, 557, 1438, 1589, 1780, 1808 |
| BsgI | GTGCAG | 1 cut(s) | 445 |
| BshFI | GGCC | 7 cut(s) | 385, 623, 704, 920, 1341, 2010, 2064 |
| BsiHKAI | GWGCWC | 3 cut(s) | 254, 1407, 1771 |
| BslFI | GGGAC | 3 cut(s) | 643, 1486, 2087 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 631, 871, 2145 |
| BsmAI | GTCTC | 1 cut(s) | 733 |
| BsmFI | GGGAC | 3 cut(s) | 643, 1486, 2087 |
| BsmI | GAATGC | 5 cut(s) | 557, 935, 1373, 1799, 1944 |
| BsnI | GGCC | 7 cut(s) | 385, 623, 704, 920, 1341, 2010, 2064 |
| Bsp1286I | GDGCHC | 3 cut(s) | 254, 1407, 1771 |
| Bsp1407I | TGTACA | 1 cut(s) | 1754 |
| Bsp143I | GATC | 8 cut(s) | 82, 208, 330, 497, 975, 1236, 1408, 1642 |
| Bsp19I | CCATGG | 1 cut(s) | 1638 |
| BspACI | CCGC | 6 cut(s) | 77, 203, 705, 991, 1162, 1362 |
| BspANI | GGCC | 7 cut(s) | 385, 623, 704, 920, 1341, 2010, 2064 |
| BspCNI | CTCAG | 2 cut(s) | 240, 1085 |
| BspHI | TCATGA | 3 cut(s) | 85, 211, 1561 |
| BspLI | GGNNCC | 2 cut(s) | 1166, 2213 |
| BspMAI | CTGCAG | 1 cut(s) | 1798 |
| BspMI | ACCTGC | 1 cut(s) | 1832 |
| BspPI | GGATC | 2 cut(s) | 505, 1650 |
| BspQI | GCTCTTC | 1 cut(s) | 405 |
| BsrBI | CCGCTC | 2 cut(s) | 707, 1162 |
| BsrDI | GCAATG | 1 cut(s) | 240 |
| BsrGI | TGTACA | 1 cut(s) | 1754 |
| BsrI | ACTGG | 3 cut(s) | 53, 179, 2129 |
| BssECI | CCNNGG | 5 cut(s) | 354, 625, 699, 1090, 1638 |
| BssMI | GATC | 8 cut(s) | 82, 208, 330, 497, 975, 1236, 1408, 1642 |
| BssNAI | GTATAC | 2 cut(s) | 796, 1873 |
| BssSI | CACGAG | 1 cut(s) | 617 |
| BssT1I | CCWWGG | 2 cut(s) | 625, 1638 |
| Bst1107I | GTATAC | 2 cut(s) | 796, 1873 |
| Bst2BI | CACGAG | 1 cut(s) | 617 |
| Bst2UI | CCWGG | 3 cut(s) | 356, 701, 1812 |
| Bst4CI | ACNGT | 8 cut(s) | 447, 602, 793, 929, 1531, 1759, 1807, 2125 |
| Bst6I | CTCTTC | 3 cut(s) | 405, 413, 1008 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 365 |
| BstAUI | TGTACA | 1 cut(s) | 1754 |
| BstC8I | GCNNGC | 3 cut(s) | 431, 655, 2118 |
| BstDEI | CTNAG | 2 cut(s) | 248, 1072 |
| BstDSI | CCRYGG | 1 cut(s) | 1638 |
| BstEII | GGTNACC | 1 cut(s) | 1034 |
| BstF5I | GGATG | 4 cut(s) | 279, 349, 378, 2154 |
| BstHHI | GCGC | 3 cut(s) | 435, 1419, 1577 |
| BstKTI | GATC | 8 cut(s) | 85, 211, 333, 500, 978, 1239, 1411, 1645 |
| BstMAI | GTCTC | 1 cut(s) | 733 |
| BstMBI | GATC | 8 cut(s) | 82, 208, 330, 497, 975, 1236, 1408, 1642 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 365, 432, 1168 |
| BstNI | CCWGG | 3 cut(s) | 356, 701, 1812 |
| BstNSI | RCATGY | 2 cut(s) | 1274, 1403 |
| BstPI | GGTNACC | 1 cut(s) | 1034 |
| BstSCI | CCNGG | 3 cut(s) | 354, 699, 1810 |
| BstSFI | CTRYAG | 1 cut(s) | 1794 |
| BstSLI | GKGCMC | 1 cut(s) | 1407 |
| BstV1I | GCAGC | 7 cut(s) | 371, 438, 557, 1438, 1589, 1780, 1808 |
| BstX2I | RGATCY | 1 cut(s) | 1642 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 743 |
| BstYI | RGATCY | 1 cut(s) | 1642 |
| BstZ17I | GTATAC | 2 cut(s) | 796, 1873 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1072 |
| BsuI | GTATCC | 3 cut(s) | 78, 204, 998 |
| BsuRI | GGCC | 7 cut(s) | 385, 623, 704, 920, 1341, 2010, 2064 |
| BtgI | CCRYGG | 1 cut(s) | 1638 |
| BtrI | CACGTC | 1 cut(s) | 1953 |
| BtsCI | GGATG | 4 cut(s) | 279, 349, 378, 2154 |
| BtsIMutI | CAGTG | 2 cut(s) | 245, 2121 |
| BveI | ACCTGC | 1 cut(s) | 1832 |
| Cac8I | GCNNGC | 3 cut(s) | 431, 655, 2118 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1811 |
| CciI | TCATGA | 3 cut(s) | 85, 211, 1561 |
| CfoI | GCGC | 3 cut(s) | 435, 1419, 1577 |
| Cfr13I | GGNCC | 3 cut(s) | 622, 1165, 1844 |
| Csp6I | GTAC | 3 cut(s) | 590, 747, 1755 |
| CviQI | GTAC | 3 cut(s) | 590, 747, 1755 |
| DdeI | CTNAG | 2 cut(s) | 248, 1072 |
| DpnI | GATC | 8 cut(s) | 84, 210, 332, 499, 977, 1238, 1410, 1644 |
| DpnII | GATC | 8 cut(s) | 82, 208, 330, 497, 975, 1236, 1408, 1642 |
| DraI | TTTAAA | 1 cut(s) | 1221 |
| EaeI | YGGCCR | 1 cut(s) | 383 |
| Eam1104I | CTCTTC | 3 cut(s) | 405, 413, 1008 |
| EarI | CTCTTC | 3 cut(s) | 405, 413, 1008 |
| EciI | GGCGGA | 1 cut(s) | 66 |
| Eco130I | CCWWGG | 2 cut(s) | 625, 1638 |
| Eco147I | AGGCCT | 1 cut(s) | 2010 |
| Eco47I | GGWCC | 2 cut(s) | 1165, 1844 |
| Eco81I | CCTNAGG | 1 cut(s) | 1072 |
| Eco91I | GGTNACC | 1 cut(s) | 1034 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1844 |
| EcoO65I | GGTNACC | 1 cut(s) | 1034 |
| EcoRII | CCWGG | 3 cut(s) | 354, 699, 1810 |
| EcoT14I | CCWWGG | 2 cut(s) | 625, 1638 |
| EcoT22I | ATGCAT | 2 cut(s) | 557, 1158 |
| ErhI | CCWWGG | 2 cut(s) | 625, 1638 |
| FaqI | GGGAC | 3 cut(s) | 643, 1486, 2087 |
| FauI | CCCGC | 2 cut(s) | 210, 1155 |
| FbaI | TGATCA | 3 cut(s) | 82, 208, 1236 |
| FblI | GTMKAC | 2 cut(s) | 795, 1872 |
| Fnu4HI | GCNGC | 9 cut(s) | 360, 427, 546, 705, 1362, 1452, 1578, 1794, 1797 |
| FokI | GGATG | 4 cut(s) | 266, 336, 385, 2161 |
| Fsp4HI | GCNGC | 9 cut(s) | 360, 427, 546, 705, 1362, 1452, 1578, 1794, 1797 |
| FspAI | RTGCGCAY | 1 cut(s) | 434 |
| FspBI | CTAG | 5 cut(s) | 98, 224, 255, 585, 611 |
| FspI | TGCGCA | 2 cut(s) | 434, 1418 |
| GlaI | GCGC | 3 cut(s) | 434, 1418, 1576 |
| GluI | GCNGC | 9 cut(s) | 360, 427, 546, 705, 1362, 1452, 1578, 1794, 1797 |
| GsuI | CTGGAG | 1 cut(s) | 719 |
| HaeIII | GGCC | 7 cut(s) | 385, 623, 704, 920, 1341, 2010, 2064 |
| HhaI | GCGC | 3 cut(s) | 435, 1419, 1577 |
| Hin6I | GCGC | 3 cut(s) | 433, 1417, 1575 |
| HinP1I | GCGC | 3 cut(s) | 433, 1417, 1575 |
| HphI | GGTGA | 4 cut(s) | 1046, 1367, 1771, 2008 |
| Hpy166II | GTNNAC | 5 cut(s) | 590, 796, 1405, 1657, 1873 |
| Hpy188I | TCNGA | 9 cut(s) | 118, 133, 148, 313, 497, 1091, 1143, 1329, 1894 |
| Hpy8I | GTNNAC | 5 cut(s) | 590, 796, 1405, 1657, 1873 |
| HpyAV | CCTTC | 6 cut(s) | 603, 1025, 1196, 1708, 1729, 2149 |
| HpyCH4III | ACNGT | 8 cut(s) | 447, 602, 793, 929, 1531, 1759, 1807, 2125 |
| HpyCH4IV | ACGT | 3 cut(s) | 859, 1952, 1957 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 365, 432, 1168 |
| HpyF3I | CTNAG | 2 cut(s) | 248, 1072 |
| HpySE526I | ACGT | 3 cut(s) | 859, 1952, 1957 |
| HspAI | GCGC | 3 cut(s) | 433, 1417, 1575 |
| Ksp22I | TGATCA | 3 cut(s) | 82, 208, 1236 |
| Kzo9I | GATC | 8 cut(s) | 82, 208, 330, 497, 975, 1236, 1408, 1642 |
| LguI | GCTCTTC | 1 cut(s) | 405 |
| LmnI | GCTCC | 1 cut(s) | 260 |
| Lsp1109I | GCAGC | 7 cut(s) | 371, 438, 557, 1438, 1589, 1780, 1808 |
| LweI | GCATC | 7 cut(s) | 79, 205, 288, 1066, 1143, 1885, 2139 |
| MaeI | CTAG | 5 cut(s) | 98, 224, 255, 585, 611 |
| MaeII | ACGT | 3 cut(s) | 859, 1952, 1957 |
| MalI | GATC | 8 cut(s) | 84, 210, 332, 499, 977, 1238, 1410, 1644 |
| MbiI | CCGCTC | 2 cut(s) | 707, 1162 |
| MboI | GATC | 8 cut(s) | 82, 208, 330, 497, 975, 1236, 1408, 1642 |
| MflI | RGATCY | 1 cut(s) | 1642 |
| MhlI | GDGCHC | 3 cut(s) | 254, 1407, 1771 |
| MlsI | TGGCCA | 1 cut(s) | 385 |
| MluNI | TGGCCA | 1 cut(s) | 385 |
| MlyI | GAGTC | 2 cut(s) | 236, 948 |
| MmeI | TCCRAC | 2 cut(s) | 95, 221 |
| Mox20I | TGGCCA | 1 cut(s) | 385 |
| Mph1103I | ATGCAT | 2 cut(s) | 557, 1158 |
| MscI | TGGCCA | 1 cut(s) | 385 |
| MseI | TTAA | 7 cut(s) | 20, 458, 515, 561, 1220, 1611, 1859 |
| MslI | CAYNNNNRTG | 5 cut(s) | 1032, 1784, 1997, 2042, 2147 |
| Msp20I | TGGCCA | 1 cut(s) | 385 |
| MspA1I | CMGCKG | 2 cut(s) | 548, 1364 |
| MspR9I | CCNGG | 3 cut(s) | 356, 701, 1812 |
| Mva1269I | GAATGC | 5 cut(s) | 557, 935, 1373, 1799, 1944 |
| MvaI | CCWGG | 3 cut(s) | 356, 701, 1812 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 365, 432, 1168 |
| NcoI | CCATGG | 1 cut(s) | 1638 |
| NdeII | GATC | 8 cut(s) | 82, 208, 330, 497, 975, 1236, 1408, 1642 |
| NlaIV | GGNNCC | 2 cut(s) | 1166, 2213 |
| NmuCI | GTSAC | 8 cut(s) | 814, 910, 1034, 1373, 1551, 1777, 1953, 2014 |
| NsbI | TGCGCA | 2 cut(s) | 434, 1418 |
| NsiI | ATGCAT | 2 cut(s) | 557, 1158 |
| NspI | RCATGY | 2 cut(s) | 1274, 1403 |
| PagI | TCATGA | 3 cut(s) | 85, 211, 1561 |
| PceI | AGGCCT | 1 cut(s) | 2010 |
| PciI | ACATGT | 1 cut(s) | 1399 |
| PciSI | GCTCTTC | 1 cut(s) | 405 |
| PctI | GAATGC | 5 cut(s) | 557, 935, 1373, 1799, 1944 |
| PfeI | GAWTC | 9 cut(s) | 125, 155, 1048, 1105, 1125, 1319, 1481, 1649, 1696 |
| PkrI | GCNGC | 9 cut(s) | 361, 428, 547, 706, 1363, 1453, 1579, 1795, 1798 |
| PleI | GAGTC | 2 cut(s) | 235, 948 |
| PpsI | GAGTC | 2 cut(s) | 235, 948 |
| PpuMI | RGGWCCY | 1 cut(s) | 1844 |
| PscI | ACATGT | 1 cut(s) | 1399 |
| PsiI | TTATAA | 1 cut(s) | 1389 |
| Psp1406I | AACGTT | 1 cut(s) | 859 |
| Psp5II | RGGWCCY | 1 cut(s) | 1844 |
| Psp6I | CCWGG | 3 cut(s) | 354, 699, 1810 |
| PspEI | GGTNACC | 1 cut(s) | 1034 |
| PspGI | CCWGG | 3 cut(s) | 354, 699, 1810 |
| PspN4I | GGNNCC | 2 cut(s) | 1166, 2213 |
| PspPI | GGNCC | 3 cut(s) | 622, 1165, 1844 |
| PspPPI | RGGWCCY | 1 cut(s) | 1844 |
| PstI | CTGCAG | 1 cut(s) | 1798 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1811 |
| PsuI | RGATCY | 1 cut(s) | 1642 |
| PvuII | CAGCTG | 1 cut(s) | 548 |
| RsaI | GTAC | 3 cut(s) | 591, 748, 1756 |
| RsaNI | GTAC | 3 cut(s) | 590, 747, 1755 |
| RseI | CAYNNNNRTG | 5 cut(s) | 1032, 1784, 1997, 2042, 2147 |
| SapI | GCTCTTC | 1 cut(s) | 405 |
| SaqAI | TTAA | 7 cut(s) | 20, 458, 515, 561, 1220, 1611, 1859 |
| SatI | GCNGC | 9 cut(s) | 360, 427, 546, 705, 1362, 1452, 1578, 1794, 1797 |
| Sau3AI | GATC | 8 cut(s) | 82, 208, 330, 497, 975, 1236, 1408, 1642 |
| Sau96I | GGNCC | 3 cut(s) | 622, 1165, 1844 |
| SchI | GAGTC | 2 cut(s) | 236, 948 |
| ScrFI | CCNGG | 3 cut(s) | 356, 701, 1812 |
| SduI | GDGCHC | 3 cut(s) | 254, 1407, 1771 |
| SfaNI | GCATC | 7 cut(s) | 79, 205, 288, 1066, 1143, 1885, 2139 |
| SfcI | CTRYAG | 1 cut(s) | 1794 |
| SinI | GGWCC | 2 cut(s) | 1165, 1844 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 1032, 1784, 1997, 2042, 2147 |
| SpeI | ACTAGT | 1 cut(s) | 584 |
| SseBI | AGGCCT | 1 cut(s) | 2010 |
| SsiI | CCGC | 6 cut(s) | 77, 203, 705, 991, 1162, 1362 |
| SspI | AATATT | 4 cut(s) | 901, 1216, 1301, 2202 |
| SspMI | CTAG | 5 cut(s) | 98, 224, 255, 585, 611 |
| StuI | AGGCCT | 1 cut(s) | 2010 |
| StyD4I | CCNGG | 3 cut(s) | 354, 699, 1810 |
| StyI | CCWWGG | 2 cut(s) | 625, 1638 |
| TaaI | ACNGT | 8 cut(s) | 447, 602, 793, 929, 1531, 1759, 1807, 2125 |
| TaiI | ACGT | 3 cut(s) | 862, 1955, 1960 |
| TaqI | TCGA | 1 cut(s) | 1916 |
| TatI | WGTACW | 1 cut(s) | 1754 |
| TauI | GCSGC | 2 cut(s) | 707, 1364 |
| TfiI | GAWTC | 9 cut(s) | 125, 155, 1048, 1105, 1125, 1319, 1481, 1649, 1696 |
| Tru1I | TTAA | 7 cut(s) | 20, 458, 515, 561, 1220, 1611, 1859 |
| Tru9I | TTAA | 7 cut(s) | 20, 458, 515, 561, 1220, 1611, 1859 |
| TscAI | CASTG | 2 cut(s) | 252, 2128 |
| TseFI | GTSAC | 8 cut(s) | 814, 910, 1034, 1373, 1551, 1777, 1953, 2014 |
| TseI | GCWGC | 7 cut(s) | 359, 426, 545, 1451, 1577, 1793, 1796 |
| Tsp45I | GTSAC | 8 cut(s) | 814, 910, 1034, 1373, 1551, 1777, 1953, 2014 |
| TspGWI | ACGGA | 4 cut(s) | 749, 1706, 1915, 2148 |
| TspRI | CASTG | 2 cut(s) | 252, 2128 |
| VneI | GTGCAC | 1 cut(s) | 1403 |
| VpaK11BI | GGWCC | 2 cut(s) | 1165, 1844 |
| XapI | RAATTY | 8 cut(s) | 29, 109, 139, 783, 970, 1383, 1557, 2220 |
| XceI | RCATGY | 2 cut(s) | 1274, 1403 |
| XmiI | GTMKAC | 2 cut(s) | 795, 1872 |
| XspI | CTAG | 5 cut(s) | 98, 224, 255, 585, 611 |
| Zsp2I | ATGCAT | 2 cut(s) | 557, 1158 |