protein ubiquitination
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| PGG | PF13962 | 157 - 268 | 9e-26 | Domain of unknown function |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 183 |
| AccI | GTMKAC | 1 cut(s) | 237 |
| AccII | CGCG | 1 cut(s) | 695 |
| AciI | CCGC | 2 cut(s) | 573, 695 |
| AcsI | RAATTY | 2 cut(s) | 177, 394 |
| AcuI | CTGAAG | 1 cut(s) | 606 |
| AcvI | CACGTG | 1 cut(s) | 419 |
| AfaI | GTAC | 2 cut(s) | 108, 369 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 873 |
| AflIII | ACRYGT | 1 cut(s) | 67 |
| AgsI | TTSAA | 5 cut(s) | 50, 161, 214, 349, 934 |
| AleI | CACNNNNGTG | 1 cut(s) | 869 |
| AluBI | AGCT | 3 cut(s) | 27, 295, 620 |
| AluI | AGCT | 3 cut(s) | 27, 295, 620 |
| Alw21I | GWGCWC | 2 cut(s) | 511, 580 |
| AoxI | GGCC | 1 cut(s) | 739 |
| ApeKI | GCWGC | 4 cut(s) | 266, 314, 533, 536 |
| ApoI | RAATTY | 2 cut(s) | 177, 394 |
| AspS9I | GGNCC | 1 cut(s) | 830 |
| AsuC2I | CCSGG | 1 cut(s) | 552 |
| AsuHPI | GGTGA | 3 cut(s) | 739, 757, 856 |
| AvaII | GGWCC | 1 cut(s) | 830 |
| BaeGI | GKGCMC | 1 cut(s) | 552 |
| BbrPI | CACGTG | 1 cut(s) | 419 |
| Bbv12I | GWGCWC | 2 cut(s) | 511, 580 |
| BbvI | GCAGC | 4 cut(s) | 278, 326, 520, 548 |
| BceAI | ACGGC | 3 cut(s) | 38, 140, 150 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 760, 794 |
| BclI | TGATCA | 1 cut(s) | 10 |
| BcnI | CCSGG | 1 cut(s) | 552 |
| BfmI | CTRYAG | 3 cut(s) | 234, 338, 534 |
| BisI | GCNGC | 4 cut(s) | 267, 315, 534, 537 |
| BlsI | GCNGC | 4 cut(s) | 268, 316, 535, 538 |
| BmcAI | AGTACT | 1 cut(s) | 108 |
| Bme1390I | CCNGG | 1 cut(s) | 552 |
| Bme18I | GGWCC | 1 cut(s) | 830 |
| BmgT120I | GGNCC | 1 cut(s) | 830 |
| BmrFI | CCNGG | 1 cut(s) | 552 |
| BmsI | GCATC | 4 cut(s) | 315, 616, 795, 867 |
| BpuEI | CTTGAG | 1 cut(s) | 695 |
| BpuMI | CCSGG | 1 cut(s) | 552 |
| BsaAI | YACGTR | 1 cut(s) | 419 |
| BsaJI | CCNNGG | 2 cut(s) | 307, 818 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 873 |
| Bse1I | ACTGG | 1 cut(s) | 104 |
| BseDI | CCNNGG | 2 cut(s) | 307, 818 |
| BseGI | GGATG | 1 cut(s) | 882 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 873 |
| BseNI | ACTGG | 1 cut(s) | 104 |
| BseSI | GKGCMC | 1 cut(s) | 552 |
| BseXI | GCAGC | 4 cut(s) | 278, 326, 520, 548 |
| BsgI | GTGCAG | 1 cut(s) | 333 |
| Bsh1236I | CGCG | 1 cut(s) | 695 |
| BshFI | GGCC | 1 cut(s) | 741 |
| BsiHKAI | GWGCWC | 2 cut(s) | 511, 580 |
| BsiSI | CCGG | 1 cut(s) | 552 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 873 |
| BsmI | GAATGC | 1 cut(s) | 167 |
| BsnI | GGCC | 1 cut(s) | 741 |
| Bsp1286I | GDGCHC | 3 cut(s) | 511, 552, 580 |
| Bsp143I | GATC | 3 cut(s) | 10, 15, 777 |
| Bsp19I | CCATGG | 1 cut(s) | 818 |
| BspACI | CCGC | 2 cut(s) | 573, 695 |
| BspANI | GGCC | 1 cut(s) | 741 |
| BspFNI | CGCG | 1 cut(s) | 695 |
| BspHI | TCATGA | 1 cut(s) | 811 |
| BspMAI | CTGCAG | 1 cut(s) | 538 |
| BsrI | ACTGG | 1 cut(s) | 104 |
| BssECI | CCNNGG | 2 cut(s) | 307, 818 |
| BssMI | GATC | 3 cut(s) | 10, 15, 777 |
| BssT1I | CCWWGG | 2 cut(s) | 307, 818 |
| Bst4CI | ACNGT | 4 cut(s) | 235, 342, 499, 547 |
| Bst6I | CTCTTC | 1 cut(s) | 90 |
| BstBAI | YACGTR | 1 cut(s) | 419 |
| BstDSI | CCRYGG | 1 cut(s) | 818 |
| BstF5I | GGATG | 1 cut(s) | 882 |
| BstFNI | CGCG | 1 cut(s) | 695 |
| BstKTI | GATC | 3 cut(s) | 13, 18, 780 |
| BstMBI | GATC | 3 cut(s) | 10, 15, 777 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 626 |
| BstNSI | RCATGY | 3 cut(s) | 71, 259, 266 |
| BstSCI | CCNGG | 1 cut(s) | 550 |
| BstSFI | CTRYAG | 3 cut(s) | 234, 338, 534 |
| BstSLI | GKGCMC | 1 cut(s) | 552 |
| BstUI | CGCG | 1 cut(s) | 695 |
| BstV1I | GCAGC | 4 cut(s) | 278, 326, 520, 548 |
| BsuRI | GGCC | 1 cut(s) | 741 |
| BtgI | CCRYGG | 1 cut(s) | 818 |
| BtsCI | GGATG | 1 cut(s) | 882 |
| BtsI | GCAGTG | 1 cut(s) | 48 |
| BtsIMutI | CAGTG | 3 cut(s) | 48, 347, 552 |
| CciI | TCATGA | 1 cut(s) | 811 |
| Cfr13I | GGNCC | 1 cut(s) | 830 |
| CseI | GACGC | 1 cut(s) | 910 |
| Csp6I | GTAC | 2 cut(s) | 107, 368 |
| CviAII | CATG | 8 cut(s) | 68, 194, 256, 263, 492, 772, 812, 819 |
| CviJI | RGCY | 6 cut(s) | 6, 27, 53, 295, 620, 741 |
| CviKI_1 | RGCY | 6 cut(s) | 6, 27, 53, 295, 620, 741 |
| CviQI | GTAC | 2 cut(s) | 107, 368 |
| DpnI | GATC | 3 cut(s) | 12, 17, 779 |
| DpnII | GATC | 3 cut(s) | 10, 15, 777 |
| DraI | TTTAAA | 1 cut(s) | 400 |
| Eam1104I | CTCTTC | 1 cut(s) | 90 |
| EarI | CTCTTC | 1 cut(s) | 90 |
| Eco130I | CCWWGG | 2 cut(s) | 307, 818 |
| Eco32I | GATATC | 1 cut(s) | 223 |
| Eco47I | GGWCC | 1 cut(s) | 830 |
| Eco57I | CTGAAG | 1 cut(s) | 606 |
| Eco72I | CACGTG | 1 cut(s) | 419 |
| EcoRV | GATATC | 1 cut(s) | 223 |
| EcoT14I | CCWWGG | 2 cut(s) | 307, 818 |
| ErhI | CCWWGG | 2 cut(s) | 307, 818 |
| FaeI | CATG | 8 cut(s) | 71, 197, 259, 266, 495, 775, 815, 822 |
| FatI | CATG | 8 cut(s) | 67, 193, 255, 262, 491, 771, 811, 818 |
| FbaI | TGATCA | 1 cut(s) | 10 |
| FblI | GTMKAC | 1 cut(s) | 237 |
| Fnu4HI | GCNGC | 4 cut(s) | 267, 315, 534, 537 |
| FokI | GGATG | 1 cut(s) | 889 |
| Fsp4HI | GCNGC | 4 cut(s) | 267, 315, 534, 537 |
| GluI | GCNGC | 4 cut(s) | 267, 315, 534, 537 |
| HaeIII | GGCC | 1 cut(s) | 741 |
| HapII | CCGG | 1 cut(s) | 552 |
| HgaI | GACGC | 1 cut(s) | 910 |
| Hin1II | CATG | 8 cut(s) | 71, 197, 259, 266, 495, 775, 815, 822 |
| HindIII | AAGCTT | 1 cut(s) | 293 |
| HinfI | GANTC | 3 cut(s) | 206, 675, 883 |
| HpaII | CCGG | 1 cut(s) | 552 |
| HphI | GGTGA | 3 cut(s) | 739, 757, 856 |
| Hpy166II | GTNNAC | 3 cut(s) | 238, 422, 543 |
| Hpy188I | TCNGA | 3 cut(s) | 15, 20, 625 |
| Hpy188III | TCNNGA | 3 cut(s) | 170, 802, 812 |
| Hpy8I | GTNNAC | 3 cut(s) | 238, 422, 543 |
| Hpy99I | CGWCG | 2 cut(s) | 119, 904 |
| HpyAV | CCTTC | 2 cut(s) | 448, 752 |
| HpyCH4III | ACNGT | 4 cut(s) | 235, 342, 499, 547 |
| HpyCH4IV | ACGT | 4 cut(s) | 114, 406, 418, 688 |
| HpyCH4V | TGCA | 9 cut(s) | 34, 266, 290, 314, 328, 495, 536, 848, 880 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 626 |
| HpySE526I | ACGT | 4 cut(s) | 114, 406, 418, 688 |
| Hsp92II | CATG | 8 cut(s) | 71, 197, 259, 266, 495, 775, 815, 822 |
| Ksp22I | TGATCA | 1 cut(s) | 10 |
| Kzo9I | GATC | 3 cut(s) | 10, 15, 777 |
| LmnI | GCTCC | 1 cut(s) | 583 |
| LpnPI | CCDG | 5 cut(s) | 117, 255, 444, 565, 781 |
| Lsp1109I | GCAGC | 4 cut(s) | 278, 326, 520, 548 |
| LweI | GCATC | 4 cut(s) | 315, 616, 795, 867 |
| MaeII | ACGT | 4 cut(s) | 114, 406, 418, 688 |
| MaeIII | GTNAC | 5 cut(s) | 517, 689, 717, 763, 862 |
| MalI | GATC | 3 cut(s) | 12, 17, 779 |
| MboI | GATC | 3 cut(s) | 10, 15, 777 |
| MboII | GAAGA | 4 cut(s) | 77, 185, 636, 710 |
| MhlI | GDGCHC | 3 cut(s) | 511, 552, 580 |
| MluCI | AATT | 3 cut(s) | 177, 394, 955 |
| MlyI | GAGTC | 1 cut(s) | 877 |
| MnlI | CCTC | 3 cut(s) | 56, 267, 346 |
| MseI | TTAA | 3 cut(s) | 399, 945, 958 |
| MslI | CAYNNNNRTG | 2 cut(s) | 770, 869 |
| MspI | CCGG | 1 cut(s) | 552 |
| MspR9I | CCNGG | 1 cut(s) | 552 |
| Mva1269I | GAATGC | 1 cut(s) | 167 |
| MvnI | CGCG | 1 cut(s) | 695 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 626 |
| NciI | CCSGG | 1 cut(s) | 552 |
| NcoI | CCATGG | 1 cut(s) | 818 |
| NdeII | GATC | 3 cut(s) | 10, 15, 777 |
| NlaIII | CATG | 8 cut(s) | 71, 197, 259, 266, 495, 775, 815, 822 |
| NmuCI | GTSAC | 2 cut(s) | 763, 862 |
| NspI | RCATGY | 3 cut(s) | 71, 259, 266 |
| OliI | CACNNNNGTG | 1 cut(s) | 869 |
| PagI | TCATGA | 1 cut(s) | 811 |
| PciI | ACATGT | 1 cut(s) | 67 |
| PctI | GAATGC | 1 cut(s) | 167 |
| PfeI | GAWTC | 2 cut(s) | 206, 675 |
| PkrI | GCNGC | 4 cut(s) | 268, 316, 535, 538 |
| PleI | GAGTC | 1 cut(s) | 877 |
| PmaCI | CACGTG | 1 cut(s) | 419 |
| PmlI | CACGTG | 1 cut(s) | 419 |
| PpsI | GAGTC | 1 cut(s) | 877 |
| Ppu21I | YACGTR | 1 cut(s) | 419 |
| PscI | ACATGT | 1 cut(s) | 67 |
| PsiI | TTATAA | 1 cut(s) | 183 |
| PspCI | CACGTG | 1 cut(s) | 419 |
| PspPI | GGNCC | 1 cut(s) | 830 |
| PstI | CTGCAG | 1 cut(s) | 538 |
| RsaI | GTAC | 2 cut(s) | 108, 369 |
| RsaNI | GTAC | 2 cut(s) | 107, 368 |
| RseI | CAYNNNNRTG | 2 cut(s) | 770, 869 |
| SaqAI | TTAA | 3 cut(s) | 399, 945, 958 |
| SatI | GCNGC | 4 cut(s) | 267, 315, 534, 537 |
| Sau3AI | GATC | 3 cut(s) | 10, 15, 777 |
| Sau96I | GGNCC | 1 cut(s) | 830 |
| ScaI | AGTACT | 1 cut(s) | 108 |
| SchI | GAGTC | 1 cut(s) | 877 |
| ScrFI | CCNGG | 1 cut(s) | 552 |
| SduI | GDGCHC | 3 cut(s) | 511, 552, 580 |
| SfaNI | GCATC | 4 cut(s) | 315, 616, 795, 867 |
| SfcI | CTRYAG | 3 cut(s) | 234, 338, 534 |
| SinI | GGWCC | 1 cut(s) | 830 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 770, 869 |
| SmlI | CTYRAG | 1 cut(s) | 710 |
| SmoI | CTYRAG | 1 cut(s) | 710 |
| Sse9I | AATT | 3 cut(s) | 177, 394, 955 |
| SsiI | CCGC | 2 cut(s) | 573, 695 |
| SspI | AATATT | 1 cut(s) | 930 |
| StyD4I | CCNGG | 1 cut(s) | 550 |
| StyI | CCWWGG | 2 cut(s) | 307, 818 |
| TaaI | ACNGT | 4 cut(s) | 235, 342, 499, 547 |
| TaiI | ACGT | 4 cut(s) | 117, 409, 421, 691 |
| TaqI | TCGA | 1 cut(s) | 470 |
| TasI | AATT | 3 cut(s) | 177, 394, 955 |
| TatI | WGTACW | 1 cut(s) | 106 |
| TfiI | GAWTC | 2 cut(s) | 206, 675 |
| Tru1I | TTAA | 3 cut(s) | 399, 945, 958 |
| Tru9I | TTAA | 3 cut(s) | 399, 945, 958 |
| TscAI | CASTG | 3 cut(s) | 48, 347, 552 |
| TseFI | GTSAC | 2 cut(s) | 763, 862 |
| TseI | GCWGC | 4 cut(s) | 266, 314, 533, 536 |
| Tsp45I | GTSAC | 2 cut(s) | 763, 862 |
| TspDTI | ATGAA | 5 cut(s) | 365, 480, 488, 800, 828 |
| TspRI | CASTG | 3 cut(s) | 48, 347, 552 |
| VpaK11BI | GGWCC | 1 cut(s) | 830 |
| XapI | RAATTY | 2 cut(s) | 177, 394 |
| XceI | RCATGY | 3 cut(s) | 71, 259, 266 |
| XmiI | GTMKAC | 1 cut(s) | 237 |
| ZrmI | AGTACT | 1 cut(s) | 108 |