Domain of unknown function
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 1340 |
| AccI | GTMKAC | 2 cut(s) | 46, 765 |
| AccII | CGCG | 4 cut(s) | 842, 989, 1103, 1743 |
| AclI | AACGTT | 1 cut(s) | 1761 |
| AclWI | GGATC | 4 cut(s) | 320, 545, 651, 1284 |
| AcsI | RAATTY | 2 cut(s) | 318, 833 |
| AcuI | CTGAAG | 3 cut(s) | 240, 1136, 1697 |
| AfaI | GTAC | 1 cut(s) | 494 |
| AfeI | AGCGCT | 1 cut(s) | 372 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 59, 1273, 1528 |
| AflIII | ACRYGT | 1 cut(s) | 760 |
| AgsI | TTSAA | 2 cut(s) | 163, 1231 |
| AjiI | CACGTC | 1 cut(s) | 761 |
| AjnI | CCWGG | 2 cut(s) | 433, 1138 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 188, 220 |
| AluBI | AGCT | 8 cut(s) | 72, 224, 272, 778, 794, 875, 1148, 1792 |
| AluI | AGCT | 8 cut(s) | 72, 224, 272, 778, 794, 875, 1148, 1792 |
| Alw26I | GTCTC | 5 cut(s) | 246, 675, 994, 1488, 1518 |
| AlwI | GGATC | 4 cut(s) | 320, 545, 651, 1284 |
| Ama87I | CYCGRG | 1 cut(s) | 678 |
| Aor51HI | AGCGCT | 1 cut(s) | 372 |
| AoxI | GGCC | 1 cut(s) | 61 |
| ApaI | GGGCCC | 1 cut(s) | 65 |
| ApeKI | GCWGC | 3 cut(s) | 104, 383, 1145 |
| ApoI | RAATTY | 2 cut(s) | 318, 833 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 200 |
| AspLEI | GCGC | 3 cut(s) | 373, 712, 1745 |
| AspS9I | GGNCC | 4 cut(s) | 61, 62, 208, 951 |
| AsuC2I | CCSGG | 1 cut(s) | 1383 |
| AsuHPI | GGTGA | 4 cut(s) | 433, 1339, 1462, 1696 |
| AvaI | CYCGRG | 1 cut(s) | 678 |
| AvaII | GGWCC | 2 cut(s) | 208, 951 |
| BaeGI | GKGCMC | 1 cut(s) | 65 |
| BanII | GRGCYC | 2 cut(s) | 65, 1114 |
| BauI | CACGAG | 3 cut(s) | 599, 1280, 1651 |
| BbvI | GCAGC | 3 cut(s) | 116, 370, 1157 |
| BccI | CCATC | 2 cut(s) | 614, 1585 |
| BceAI | ACGGC | 1 cut(s) | 1417 |
| BciT130I | CCWGG | 2 cut(s) | 435, 1140 |
| BciVI | GTATCC | 1 cut(s) | 669 |
| BcnI | CCSGG | 1 cut(s) | 1383 |
| BcoDI | GTCTC | 5 cut(s) | 246, 675, 994, 1488, 1518 |
| BfaI | CTAG | 3 cut(s) | 738, 779, 806 |
| BfoI | RGCGCY | 2 cut(s) | 374, 713 |
| BfuI | GTATCC | 1 cut(s) | 669 |
| BglII | AGATCT | 2 cut(s) | 1011, 1734 |
| BisI | GCNGC | 6 cut(s) | 105, 384, 843, 1101, 1146, 1338 |
| BlsI | GCNGC | 6 cut(s) | 106, 385, 844, 1102, 1147, 1339 |
| Bme1390I | CCNGG | 3 cut(s) | 435, 1140, 1383 |
| Bme18I | GGWCC | 2 cut(s) | 208, 951 |
| BmeT110I | CYCGRG | 1 cut(s) | 678 |
| BmgBI | CACGTC | 1 cut(s) | 761 |
| BmgT120I | GGNCC | 4 cut(s) | 61, 62, 208, 951 |
| BmiI | GGNNCC | 2 cut(s) | 63, 64 |
| BmrFI | CCNGG | 3 cut(s) | 435, 1140, 1383 |
| BmsI | GCATC | 3 cut(s) | 585, 1146, 1219 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1613 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 582, 614, 1634, 1666 |
| BpuEI | CTTGAG | 4 cut(s) | 774, 1105, 1493, 1751 |
| BpuMI | CCSGG | 1 cut(s) | 1383 |
| Bsa29I | ATCGAT | 1 cut(s) | 96 |
| BsaBI | GATNNNNATC | 1 cut(s) | 549 |
| BsaJI | CCNNGG | 3 cut(s) | 1381, 1498, 1775 |
| BsaWI | WCCGGW | 1 cut(s) | 1720 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 59, 1273, 1528 |
| Bse1I | ACTGG | 1 cut(s) | 394 |
| Bse8I | GATNNNNATC | 1 cut(s) | 549 |
| BseBI | CCWGG | 2 cut(s) | 435, 1140 |
| BseCI | ATCGAT | 1 cut(s) | 96 |
| BseDI | CCNNGG | 3 cut(s) | 1381, 1498, 1775 |
| BseGI | GGATG | 4 cut(s) | 1050, 1308, 1416, 1704 |
| BseJI | GATNNNNATC | 1 cut(s) | 549 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 59, 1273, 1528 |
| BseMII | CTCAG | 1 cut(s) | 553 |
| BseNI | ACTGG | 1 cut(s) | 394 |
| BseRI | GAGGAG | 1 cut(s) | 1478 |
| BseSI | GKGCMC | 1 cut(s) | 65 |
| BseXI | GCAGC | 3 cut(s) | 116, 370, 1157 |
| BseYI | CCCAGC | 2 cut(s) | 1114, 1693 |
| BsgI | GTGCAG | 1 cut(s) | 1164 |
| Bsh1236I | CGCG | 4 cut(s) | 842, 989, 1103, 1743 |
| Bsh1285I | CGRYCG | 1 cut(s) | 477 |
| BshFI | GGCC | 1 cut(s) | 63 |
| BshVI | ATCGAT | 1 cut(s) | 96 |
| BsiEI | CGRYCG | 1 cut(s) | 477 |
| BsiHKCI | CYCGRG | 1 cut(s) | 678 |
| BsiSI | CCGG | 2 cut(s) | 1383, 1721 |
| BslFI | GGGAC | 2 cut(s) | 1082, 1364 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 59, 1273, 1528 |
| BsmAI | GTCTC | 5 cut(s) | 246, 675, 994, 1488, 1518 |
| BsmFI | GGGAC | 2 cut(s) | 1082, 1364 |
| BsmI | GAATGC | 2 cut(s) | 460, 1503 |
| BsnI | GGCC | 1 cut(s) | 63 |
| BsoBI | CYCGRG | 1 cut(s) | 678 |
| Bsp120I | GGGCCC | 1 cut(s) | 61 |
| Bsp1286I | GDGCHC | 2 cut(s) | 65, 1114 |
| BspANI | GGCC | 1 cut(s) | 63 |
| BspCNI | CTCAG | 1 cut(s) | 552 |
| BspDI | ATCGAT | 1 cut(s) | 96 |
| BspFNI | CGCG | 4 cut(s) | 842, 989, 1103, 1743 |
| BspHI | TCATGA | 2 cut(s) | 322, 1626 |
| BspLI | GGNNCC | 2 cut(s) | 63, 64 |
| BspPI | GGATC | 4 cut(s) | 320, 545, 651, 1284 |
| BspQI | GCTCTTC | 1 cut(s) | 1155 |
| BsrBI | CCGCTC | 1 cut(s) | 1340 |
| BsrI | ACTGG | 1 cut(s) | 394 |
| BssECI | CCNNGG | 3 cut(s) | 1381, 1498, 1775 |
| BssNAI | GTATAC | 1 cut(s) | 766 |
| BssSI | CACGAG | 3 cut(s) | 599, 1280, 1651 |
| Bst1107I | GTATAC | 1 cut(s) | 766 |
| Bst2BI | CACGAG | 3 cut(s) | 599, 1280, 1651 |
| Bst2UI | CCWGG | 2 cut(s) | 435, 1140 |
| Bst4CI | ACNGT | 9 cut(s) | 176, 497, 527, 686, 812, 1330, 1378, 1394, 1523 |
| Bst6I | CTCTTC | 4 cut(s) | 164, 297, 1155, 1521 |
| BstC8I | GCNNGC | 2 cut(s) | 714, 1406 |
| BstDEI | CTNAG | 3 cut(s) | 539, 663, 1041 |
| BstEII | GGTNACC | 1 cut(s) | 1388 |
| BstF5I | GGATG | 4 cut(s) | 1050, 1308, 1416, 1704 |
| BstFNI | CGCG | 4 cut(s) | 842, 989, 1103, 1743 |
| BstH2I | RGCGCY | 2 cut(s) | 374, 713 |
| BstHHI | GCGC | 3 cut(s) | 373, 712, 1745 |
| BstMAI | GTCTC | 5 cut(s) | 246, 675, 994, 1488, 1518 |
| BstMCI | CGRYCG | 1 cut(s) | 477 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 69, 230, 707, 747, 1109, 1207 |
| BstNI | CCWGG | 2 cut(s) | 435, 1140 |
| BstNSI | RCATGY | 2 cut(s) | 788, 1408 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1613 |
| BstPI | GGTNACC | 1 cut(s) | 1388 |
| BstSCI | CCNGG | 3 cut(s) | 433, 1138, 1381 |
| BstSLI | GKGCMC | 1 cut(s) | 65 |
| BstUI | CGCG | 4 cut(s) | 842, 989, 1103, 1743 |
| BstV1I | GCAGC | 3 cut(s) | 116, 370, 1157 |
| BstX2I | RGATCY | 4 cut(s) | 643, 1011, 1276, 1734 |
| BstYI | RGATCY | 4 cut(s) | 643, 1011, 1276, 1734 |
| BstZ17I | GTATAC | 1 cut(s) | 766 |
| Bsu15I | ATCGAT | 1 cut(s) | 96 |
| BsuI | GTATCC | 1 cut(s) | 669 |
| BsuRI | GGCC | 1 cut(s) | 63 |
| BsuTUI | ATCGAT | 1 cut(s) | 96 |
| BtgZI | GCGATG | 1 cut(s) | 608 |
| BtrI | CACGTC | 1 cut(s) | 761 |
| BtsCI | GGATG | 4 cut(s) | 1050, 1308, 1416, 1704 |
| BtsIMutI | CAGTG | 5 cut(s) | 181, 387, 451, 547, 691 |
| Cac8I | GCNNGC | 2 cut(s) | 714, 1406 |
| CciI | TCATGA | 2 cut(s) | 322, 1626 |
| CfoI | GCGC | 3 cut(s) | 373, 712, 1745 |
| Cfr13I | GGNCC | 4 cut(s) | 61, 62, 208, 951 |
| ClaI | ATCGAT | 1 cut(s) | 96 |
| CseI | GACGC | 3 cut(s) | 848, 1463, 1630 |
| Csp6I | GTAC | 1 cut(s) | 493 |
| CviAII | CATG | 7 cut(s) | 323, 706, 785, 1405, 1476, 1492, 1627 |
| CviQI | GTAC | 1 cut(s) | 493 |
| DdeI | CTNAG | 3 cut(s) | 539, 663, 1041 |
| Eam1104I | CTCTTC | 4 cut(s) | 164, 297, 1155, 1521 |
| EarI | CTCTTC | 4 cut(s) | 164, 297, 1155, 1521 |
| EciI | GGCGGA | 1 cut(s) | 1357 |
| Eco24I | GRGCYC | 2 cut(s) | 65, 1114 |
| Eco32I | GATATC | 1 cut(s) | 943 |
| Eco47I | GGWCC | 2 cut(s) | 208, 951 |
| Eco47III | AGCGCT | 1 cut(s) | 372 |
| Eco57I | CTGAAG | 3 cut(s) | 240, 1136, 1697 |
| Eco88I | CYCGRG | 1 cut(s) | 678 |
| Eco91I | GGTNACC | 1 cut(s) | 1388 |
| EcoO109I | RGGNCCY | 1 cut(s) | 62 |
| EcoO65I | GGTNACC | 1 cut(s) | 1388 |
| EcoRI | GAATTC | 1 cut(s) | 318 |
| EcoRII | CCWGG | 2 cut(s) | 433, 1138 |
| EcoRV | GATATC | 1 cut(s) | 943 |
| EcoT38I | GRGCYC | 2 cut(s) | 65, 1114 |
| FaeI | CATG | 7 cut(s) | 326, 709, 788, 1408, 1479, 1495, 1630 |
| FaqI | GGGAC | 2 cut(s) | 1082, 1364 |
| FatI | CATG | 7 cut(s) | 322, 705, 784, 1404, 1475, 1491, 1626 |
| FblI | GTMKAC | 2 cut(s) | 46, 765 |
| Fnu4HI | GCNGC | 6 cut(s) | 105, 384, 843, 1101, 1146, 1338 |
| FokI | GGATG | 4 cut(s) | 1037, 1315, 1403, 1711 |
| FriOI | GRGCYC | 2 cut(s) | 65, 1114 |
| Fsp4HI | GCNGC | 6 cut(s) | 105, 384, 843, 1101, 1146, 1338 |
| FspBI | CTAG | 3 cut(s) | 738, 779, 806 |
| GlaI | GCGC | 3 cut(s) | 372, 711, 1744 |
| GluI | GCNGC | 6 cut(s) | 105, 384, 843, 1101, 1146, 1338 |
| GsaI | CCCAGC | 2 cut(s) | 1118, 1697 |
| HaeII | RGCGCY | 2 cut(s) | 374, 713 |
| HaeIII | GGCC | 1 cut(s) | 63 |
| HapII | CCGG | 2 cut(s) | 1383, 1721 |
| HgaI | GACGC | 3 cut(s) | 848, 1463, 1630 |
| HhaI | GCGC | 3 cut(s) | 373, 712, 1745 |
| Hin1II | CATG | 7 cut(s) | 326, 709, 788, 1408, 1479, 1495, 1630 |
| Hin6I | GCGC | 3 cut(s) | 371, 710, 1743 |
| HinP1I | GCGC | 3 cut(s) | 371, 710, 1743 |
| HincII | GTYRAC | 1 cut(s) | 1225 |
| HindII | GTYRAC | 1 cut(s) | 1225 |
| HindIII | AAGCTT | 3 cut(s) | 70, 222, 1790 |
| HinfI | GANTC | 6 cut(s) | 43, 563, 649, 900, 1630, 1687 |
| HpaI | GTTAAC | 1 cut(s) | 1225 |
| HpaII | CCGG | 2 cut(s) | 1383, 1721 |
| HphI | GGTGA | 4 cut(s) | 433, 1339, 1462, 1696 |
| Hpy166II | GTNNAC | 4 cut(s) | 47, 766, 1225, 1260 |
| Hpy188I | TCNGA | 9 cut(s) | 35, 453, 568, 648, 654, 1155, 1399, 1453, 1551 |
| Hpy8I | GTNNAC | 4 cut(s) | 47, 766, 1225, 1260 |
| Hpy99I | CGWCG | 2 cut(s) | 1457, 1600 |
| HpyAV | CCTTC | 1 cut(s) | 1721 |
| HpyCH4III | ACNGT | 9 cut(s) | 176, 497, 527, 686, 812, 1330, 1378, 1394, 1523 |
| HpyCH4IV | ACGT | 2 cut(s) | 760, 1761 |
| HpyCH4V | TGCA | 6 cut(s) | 91, 410, 1145, 1159, 1201, 1326 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 69, 230, 707, 747, 1109, 1207 |
| HpyF3I | CTNAG | 3 cut(s) | 539, 663, 1041 |
| HpySE526I | ACGT | 2 cut(s) | 760, 1761 |
| Hsp92II | CATG | 7 cut(s) | 326, 709, 788, 1408, 1479, 1495, 1630 |
| HspAI | GCGC | 3 cut(s) | 371, 710, 1743 |
| KspAI | GTTAAC | 1 cut(s) | 1225 |
| LguI | GCTCTTC | 1 cut(s) | 1155 |
| LmnI | GCTCC | 2 cut(s) | 590, 1285 |
| Lsp1109I | GCAGC | 3 cut(s) | 116, 370, 1157 |
| LweI | GCATC | 3 cut(s) | 585, 1146, 1219 |
| MaeI | CTAG | 3 cut(s) | 738, 779, 806 |
| MaeII | ACGT | 2 cut(s) | 760, 1761 |
| MaeIII | GTNAC | 8 cut(s) | 284, 497, 527, 601, 1388, 1606, 1618, 1725 |
| MbiI | CCGCTC | 1 cut(s) | 1340 |
| MflI | RGATCY | 4 cut(s) | 643, 1011, 1276, 1734 |
| MhlI | GDGCHC | 2 cut(s) | 65, 1114 |
| MluCI | AATT | 8 cut(s) | 318, 396, 405, 607, 753, 833, 1063, 1667 |
| MlyI | GAGTC | 2 cut(s) | 52, 1624 |
| MmeI | TCCRAC | 4 cut(s) | 165, 1476, 1574, 1618 |
| MroXI | GAANNNNTTC | 1 cut(s) | 200 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1352, 1355 |
| MspA1I | CMGCKG | 1 cut(s) | 1693 |
| MspI | CCGG | 2 cut(s) | 1383, 1721 |
| MspR9I | CCNGG | 3 cut(s) | 435, 1140, 1383 |
| Mva1269I | GAATGC | 2 cut(s) | 460, 1503 |
| MvaI | CCWGG | 2 cut(s) | 435, 1140 |
| MvnI | CGCG | 4 cut(s) | 842, 989, 1103, 1743 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 69, 230, 707, 747, 1109, 1207 |
| NciI | CCSGG | 1 cut(s) | 1383 |
| NlaIII | CATG | 7 cut(s) | 326, 709, 788, 1408, 1479, 1495, 1630 |
| NlaIV | GGNNCC | 2 cut(s) | 63, 64 |
| NmeAIII | GCCGAG | 2 cut(s) | 1479, 1756 |
| NmuCI | GTSAC | 6 cut(s) | 284, 497, 527, 601, 1606, 1618 |
| NspI | RCATGY | 2 cut(s) | 788, 1408 |
| PaeI | GCATGC | 1 cut(s) | 1408 |
| PaeR7I | CTCGAG | 1 cut(s) | 678 |
| PagI | TCATGA | 2 cut(s) | 322, 1626 |
| PciSI | GCTCTTC | 1 cut(s) | 1155 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1595 |
| PctI | GAATGC | 2 cut(s) | 460, 1503 |
| PdmI | GAANNNNTTC | 1 cut(s) | 200 |
| PfeI | GAWTC | 4 cut(s) | 563, 649, 900, 1687 |
| PkrI | GCNGC | 6 cut(s) | 106, 385, 844, 1102, 1147, 1339 |
| Ple19I | CGATCG | 1 cut(s) | 477 |
| PleI | GAGTC | 2 cut(s) | 51, 1624 |
| PpsI | GAGTC | 2 cut(s) | 51, 1624 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1613 |
| Psp1406I | AACGTT | 1 cut(s) | 1761 |
| Psp6I | CCWGG | 2 cut(s) | 433, 1138 |
| PspEI | GGTNACC | 1 cut(s) | 1388 |
| PspFI | CCCAGC | 2 cut(s) | 1114, 1693 |
| PspGI | CCWGG | 2 cut(s) | 433, 1138 |
| PspN4I | GGNNCC | 2 cut(s) | 63, 64 |
| PspOMI | GGGCCC | 1 cut(s) | 61 |
| PspPI | GGNCC | 4 cut(s) | 61, 62, 208, 951 |
| PsuI | RGATCY | 4 cut(s) | 643, 1011, 1276, 1734 |
| PvuI | CGATCG | 1 cut(s) | 477 |
| RsaI | GTAC | 1 cut(s) | 494 |
| RsaNI | GTAC | 1 cut(s) | 493 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1352, 1355 |
| SapI | GCTCTTC | 1 cut(s) | 1155 |
| SatI | GCNGC | 6 cut(s) | 105, 384, 843, 1101, 1146, 1338 |
| Sau96I | GGNCC | 4 cut(s) | 61, 62, 208, 951 |
| SchI | GAGTC | 2 cut(s) | 52, 1624 |
| ScrFI | CCNGG | 3 cut(s) | 435, 1140, 1383 |
| SduI | GDGCHC | 2 cut(s) | 65, 1114 |
| SfaNI | GCATC | 3 cut(s) | 585, 1146, 1219 |
| Sfr274I | CTCGAG | 1 cut(s) | 678 |
| SinI | GGWCC | 2 cut(s) | 208, 951 |
| SlaI | CTCGAG | 1 cut(s) | 678 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1352, 1355 |
| SmlI | CTYRAG | 5 cut(s) | 678, 789, 1120, 1508, 1730 |
| SmoI | CTYRAG | 5 cut(s) | 678, 789, 1120, 1508, 1730 |
| SphI | GCATGC | 1 cut(s) | 1408 |
| Sse9I | AATT | 8 cut(s) | 318, 396, 405, 607, 753, 833, 1063, 1667 |
| SspMI | CTAG | 3 cut(s) | 738, 779, 806 |
| StyD4I | CCNGG | 3 cut(s) | 433, 1138, 1381 |
| TaaI | ACNGT | 9 cut(s) | 176, 497, 527, 686, 812, 1330, 1378, 1394, 1523 |
| TaiI | ACGT | 2 cut(s) | 763, 1764 |
| TaqI | TCGA | 8 cut(s) | 96, 143, 618, 679, 915, 1213, 1540, 1589 |
| TaqII | GACCGA | 1 cut(s) | 225 |
| TasI | AATT | 8 cut(s) | 318, 396, 405, 607, 753, 833, 1063, 1667 |
| TauI | GCSGC | 3 cut(s) | 845, 1103, 1340 |
| TfiI | GAWTC | 4 cut(s) | 563, 649, 900, 1687 |
| TscAI | CASTG | 5 cut(s) | 181, 394, 451, 547, 691 |
| TseFI | GTSAC | 6 cut(s) | 284, 497, 527, 601, 1606, 1618 |
| TseI | GCWGC | 3 cut(s) | 104, 383, 1145 |
| Tsp45I | GTSAC | 6 cut(s) | 284, 497, 527, 601, 1606, 1618 |
| TspDTI | ATGAA | 6 cut(s) | 114, 311, 477, 585, 1082, 1319 |
| TspGWI | ACGGA | 1 cut(s) | 603 |
| TspRI | CASTG | 5 cut(s) | 181, 394, 451, 547, 691 |
| VpaK11BI | GGWCC | 2 cut(s) | 208, 951 |
| XapI | RAATTY | 2 cut(s) | 318, 833 |
| XceI | RCATGY | 2 cut(s) | 788, 1408 |
| XhoI | CTCGAG | 1 cut(s) | 678 |
| XmiI | GTMKAC | 2 cut(s) | 46, 765 |
| XmnI | GAANNNNTTC | 1 cut(s) | 200 |
| XspI | CTAG | 3 cut(s) | 738, 779, 806 |