Domain of unknown function
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| DUF4219 | PF13961 | 20 - 42 | 9.4e-08 | Domain of unknown function (DUF4219) |
| Retrotran_gag_2 | PF14223 | 29 - 96 | 2.1e-09 | gag-polypeptide of LTR copia-type |
| DUF4219 | PF13961 | 122 - 148 | 4.1e-07 | Domain of unknown function (DUF4219) |
| Retrotran_gag_2 | PF14223 | 135 - 210 | 5.2e-10 | gag-polypeptide of LTR copia-type |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 549 |
| AcsI | RAATTY | 1 cut(s) | 491 |
| AcuI | CTGAAG | 2 cut(s) | 123, 441 |
| AgsI | TTSAA | 6 cut(s) | 41, 49, 86, 137, 292, 625 |
| AjnI | CCWGG | 2 cut(s) | 518, 599 |
| AluBI | AGCT | 5 cut(s) | 8, 326, 362, 393, 488 |
| AluI | AGCT | 5 cut(s) | 8, 326, 362, 393, 488 |
| Alw26I | GTCTC | 1 cut(s) | 266 |
| AoxI | GGCC | 1 cut(s) | 522 |
| ApeKI | GCWGC | 2 cut(s) | 5, 323 |
| ApoI | RAATTY | 1 cut(s) | 491 |
| AspS9I | GGNCC | 1 cut(s) | 522 |
| AsuHPI | GGTGA | 3 cut(s) | 161, 412, 529 |
| BbsI | GAAGAC | 2 cut(s) | 477, 558 |
| BbvI | GCAGC | 2 cut(s) | 17, 335 |
| BccI | CCATC | 1 cut(s) | 247 |
| BceAI | ACGGC | 1 cut(s) | 603 |
| BciT130I | CCWGG | 2 cut(s) | 520, 601 |
| BcoDI | GTCTC | 1 cut(s) | 266 |
| BfaI | CTAG | 3 cut(s) | 332, 339, 467 |
| BfmI | CTRYAG | 1 cut(s) | 9 |
| BisI | GCNGC | 2 cut(s) | 6, 324 |
| BlsI | GCNGC | 2 cut(s) | 7, 325 |
| Bme1390I | CCNGG | 2 cut(s) | 520, 601 |
| BmgT120I | GGNCC | 1 cut(s) | 522 |
| BmrFI | CCNGG | 2 cut(s) | 520, 601 |
| BmrI | ACTGGG | 1 cut(s) | 15 |
| BmsI | GCATC | 3 cut(s) | 253, 547, 586 |
| BmuI | ACTGGG | 1 cut(s) | 15 |
| BpiI | GAAGAC | 2 cut(s) | 477, 558 |
| BsaJI | CCNNGG | 3 cut(s) | 129, 186, 519 |
| Bse1I | ACTGG | 1 cut(s) | 21 |
| Bse3DI | GCAATG | 1 cut(s) | 392 |
| BseBI | CCWGG | 2 cut(s) | 520, 601 |
| BseDI | CCNNGG | 3 cut(s) | 129, 186, 519 |
| BseGI | GGATG | 5 cut(s) | 121, 180, 258, 268, 562 |
| BseMI | GCAATG | 1 cut(s) | 392 |
| BseMII | CTCAG | 1 cut(s) | 552 |
| BseNI | ACTGG | 1 cut(s) | 21 |
| BseXI | GCAGC | 2 cut(s) | 17, 335 |
| BshFI | GGCC | 1 cut(s) | 524 |
| BslFI | GGGAC | 2 cut(s) | 2, 446 |
| BsmAI | GTCTC | 1 cut(s) | 266 |
| BsmFI | GGGAC | 2 cut(s) | 2, 446 |
| BsmI | GAATGC | 1 cut(s) | 610 |
| BsnI | GGCC | 1 cut(s) | 524 |
| BspACI | CCGC | 1 cut(s) | 549 |
| BspANI | GGCC | 1 cut(s) | 524 |
| BspCNI | CTCAG | 1 cut(s) | 553 |
| BspQI | GCTCTTC | 1 cut(s) | 198 |
| BsrDI | GCAATG | 1 cut(s) | 392 |
| BsrI | ACTGG | 1 cut(s) | 21 |
| BssECI | CCNNGG | 3 cut(s) | 129, 186, 519 |
| BssT1I | CCWWGG | 1 cut(s) | 186 |
| Bst2UI | CCWGG | 2 cut(s) | 520, 601 |
| Bst4CI | ACNGT | 3 cut(s) | 13, 133, 288 |
| Bst6I | CTCTTC | 1 cut(s) | 198 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 263 |
| BstC8I | GCNNGC | 1 cut(s) | 417 |
| BstDEI | CTNAG | 1 cut(s) | 561 |
| BstDSI | CCRYGG | 1 cut(s) | 129 |
| BstF5I | GGATG | 5 cut(s) | 121, 180, 258, 268, 562 |
| BstMAI | GTCTC | 1 cut(s) | 266 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 197, 263, 596, 605 |
| BstNI | CCWGG | 2 cut(s) | 520, 601 |
| BstNSI | RCATGY | 1 cut(s) | 533 |
| BstSCI | CCNGG | 2 cut(s) | 518, 599 |
| BstSFI | CTRYAG | 1 cut(s) | 9 |
| BstV1I | GCAGC | 2 cut(s) | 17, 335 |
| BstV2I | GAAGAC | 2 cut(s) | 477, 558 |
| BsuRI | GGCC | 1 cut(s) | 524 |
| BtgI | CCRYGG | 1 cut(s) | 129 |
| BtsCI | GGATG | 5 cut(s) | 121, 180, 258, 268, 562 |
| BtsIMutI | CAGTG | 1 cut(s) | 28 |
| Cac8I | GCNNGC | 1 cut(s) | 417 |
| Cfr13I | GGNCC | 1 cut(s) | 522 |
| CviAII | CATG | 4 cut(s) | 197, 319, 496, 530 |
| DdeI | CTNAG | 1 cut(s) | 561 |
| Eam1104I | CTCTTC | 1 cut(s) | 198 |
| EarI | CTCTTC | 1 cut(s) | 198 |
| Eco130I | CCWWGG | 1 cut(s) | 186 |
| Eco32I | GATATC | 1 cut(s) | 310 |
| Eco57I | CTGAAG | 2 cut(s) | 123, 441 |
| EcoO109I | RGGNCCY | 1 cut(s) | 522 |
| EcoRI | GAATTC | 1 cut(s) | 491 |
| EcoRII | CCWGG | 2 cut(s) | 518, 599 |
| EcoRV | GATATC | 1 cut(s) | 310 |
| EcoT14I | CCWWGG | 1 cut(s) | 186 |
| ErhI | CCWWGG | 1 cut(s) | 186 |
| FaeI | CATG | 4 cut(s) | 200, 322, 499, 533 |
| FaqI | GGGAC | 2 cut(s) | 2, 446 |
| FatI | CATG | 4 cut(s) | 196, 318, 495, 529 |
| FauI | CCCGC | 1 cut(s) | 542 |
| FauNDI | CATATG | 1 cut(s) | 162 |
| Fnu4HI | GCNGC | 2 cut(s) | 6, 324 |
| FokI | GGATG | 5 cut(s) | 128, 187, 265, 275, 569 |
| Fsp4HI | GCNGC | 2 cut(s) | 6, 324 |
| FspBI | CTAG | 3 cut(s) | 332, 339, 467 |
| GluI | GCNGC | 2 cut(s) | 6, 324 |
| HaeIII | GGCC | 1 cut(s) | 524 |
| Hin1II | CATG | 4 cut(s) | 200, 322, 499, 533 |
| HinfI | GANTC | 1 cut(s) | 563 |
| HphI | GGTGA | 3 cut(s) | 161, 412, 529 |
| Hpy188I | TCNGA | 1 cut(s) | 103 |
| Hpy188III | TCNNGA | 2 cut(s) | 38, 651 |
| HpyAV | CCTTC | 2 cut(s) | 98, 473 |
| HpyCH4III | ACNGT | 3 cut(s) | 13, 133, 288 |
| HpyCH4IV | ACGT | 1 cut(s) | 435 |
| HpyCH4V | TGCA | 3 cut(s) | 26, 200, 529 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 197, 263, 596, 605 |
| HpyF3I | CTNAG | 1 cut(s) | 561 |
| HpySE526I | ACGT | 1 cut(s) | 435 |
| Hsp92II | CATG | 4 cut(s) | 200, 322, 499, 533 |
| LguI | GCTCTTC | 1 cut(s) | 198 |
| LmnI | GCTCC | 1 cut(s) | 390 |
| LpnPI | CCDG | 6 cut(s) | 34, 401, 505, 532, 586, 613 |
| Lsp1109I | GCAGC | 2 cut(s) | 17, 335 |
| LweI | GCATC | 3 cut(s) | 253, 547, 586 |
| MaeI | CTAG | 3 cut(s) | 332, 339, 467 |
| MaeII | ACGT | 1 cut(s) | 435 |
| MaeIII | GTNAC | 2 cut(s) | 242, 575 |
| MboII | GAAGA | 6 cut(s) | 77, 185, 190, 434, 482, 558 |
| MluCI | AATT | 2 cut(s) | 96, 491 |
| MlyI | GAGTC | 1 cut(s) | 572 |
| MnlI | CCTC | 5 cut(s) | 165, 307, 468, 547, 623 |
| MseI | TTAA | 5 cut(s) | 95, 351, 357, 366, 582 |
| MslI | CAYNNNNRTG | 1 cut(s) | 251 |
| MspR9I | CCNGG | 2 cut(s) | 520, 601 |
| Mva1269I | GAATGC | 1 cut(s) | 610 |
| MvaI | CCWGG | 2 cut(s) | 520, 601 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 197, 263, 596, 605 |
| NdeI | CATATG | 1 cut(s) | 162 |
| NlaIII | CATG | 4 cut(s) | 200, 322, 499, 533 |
| NmuCI | GTSAC | 1 cut(s) | 242 |
| NspI | RCATGY | 1 cut(s) | 533 |
| PciSI | GCTCTTC | 1 cut(s) | 198 |
| PctI | GAATGC | 1 cut(s) | 610 |
| PflFI | GACNNNGTC | 1 cut(s) | 437 |
| PkrI | GCNGC | 2 cut(s) | 7, 325 |
| PleI | GAGTC | 1 cut(s) | 571 |
| PpsI | GAGTC | 1 cut(s) | 571 |
| Psp6I | CCWGG | 2 cut(s) | 518, 599 |
| PspGI | CCWGG | 2 cut(s) | 518, 599 |
| PspPI | GGNCC | 1 cut(s) | 522 |
| PsyI | GACNNNGTC | 1 cut(s) | 437 |
| RseI | CAYNNNNRTG | 1 cut(s) | 251 |
| SapI | GCTCTTC | 1 cut(s) | 198 |
| SaqAI | TTAA | 5 cut(s) | 95, 351, 357, 366, 582 |
| SatI | GCNGC | 2 cut(s) | 6, 324 |
| Sau96I | GGNCC | 1 cut(s) | 522 |
| SchI | GAGTC | 1 cut(s) | 572 |
| ScrFI | CCNGG | 2 cut(s) | 520, 601 |
| SfaNI | GCATC | 3 cut(s) | 253, 547, 586 |
| SfcI | CTRYAG | 1 cut(s) | 9 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 251 |
| Sse9I | AATT | 2 cut(s) | 96, 491 |
| SsiI | CCGC | 1 cut(s) | 549 |
| SspMI | CTAG | 3 cut(s) | 332, 339, 467 |
| StyD4I | CCNGG | 2 cut(s) | 518, 599 |
| StyI | CCWWGG | 1 cut(s) | 186 |
| TaaI | ACNGT | 3 cut(s) | 13, 133, 288 |
| TaiI | ACGT | 1 cut(s) | 438 |
| TaqI | TCGA | 1 cut(s) | 312 |
| TasI | AATT | 2 cut(s) | 96, 491 |
| Tru1I | TTAA | 5 cut(s) | 95, 351, 357, 366, 582 |
| Tru9I | TTAA | 5 cut(s) | 95, 351, 357, 366, 582 |
| TscAI | CASTG | 1 cut(s) | 28 |
| TseFI | GTSAC | 1 cut(s) | 242 |
| TseI | GCWGC | 2 cut(s) | 5, 323 |
| Tsp45I | GTSAC | 1 cut(s) | 242 |
| TspDTI | ATGAA | 4 cut(s) | 78, 185, 191, 484 |
| TspGWI | ACGGA | 1 cut(s) | 230 |
| TspRI | CASTG | 1 cut(s) | 28 |
| Tth111I | GACNNNGTC | 1 cut(s) | 437 |
| XapI | RAATTY | 1 cut(s) | 491 |
| XceI | RCATGY | 1 cut(s) | 533 |
| XspI | CTAG | 3 cut(s) | 332, 339, 467 |