protein ubiquitination
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccIII | TCCGGA | 1 cut(s) | 127 |
| AclWI | GGATC | 1 cut(s) | 498 |
| AcsI | RAATTY | 3 cut(s) | 31, 512, 580 |
| AfaI | GTAC | 1 cut(s) | 398 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 127, 158, 362, 464 |
| AgsI | TTSAA | 4 cut(s) | 47, 317, 446, 569 |
| AluBI | AGCT | 5 cut(s) | 86, 170, 275, 389, 590 |
| AluI | AGCT | 5 cut(s) | 86, 170, 275, 389, 590 |
| Alw26I | GTCTC | 1 cut(s) | 263 |
| AlwI | GGATC | 1 cut(s) | 498 |
| Aor13HI | TCCGGA | 1 cut(s) | 127 |
| ApeKI | GCWGC | 2 cut(s) | 287, 479 |
| ApoI | RAATTY | 3 cut(s) | 31, 512, 580 |
| AspLEI | GCGC | 1 cut(s) | 479 |
| AspS9I | GGNCC | 1 cut(s) | 467 |
| AsuC2I | CCSGG | 1 cut(s) | 160 |
| AvaII | GGWCC | 1 cut(s) | 467 |
| BbsI | GAAGAC | 1 cut(s) | 170 |
| BbvI | GCAGC | 2 cut(s) | 274, 466 |
| BccI | CCATC | 4 cut(s) | 156, 223, 634, 650 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 71, 105, 398, 432 |
| BcnI | CCSGG | 1 cut(s) | 160 |
| BcoDI | GTCTC | 1 cut(s) | 263 |
| BfoI | RGCGCY | 1 cut(s) | 480 |
| BisI | GCNGC | 2 cut(s) | 288, 480 |
| BlsI | GCNGC | 2 cut(s) | 289, 481 |
| Bme1390I | CCNGG | 1 cut(s) | 160 |
| Bme18I | GGWCC | 1 cut(s) | 467 |
| BmgT120I | GGNCC | 1 cut(s) | 467 |
| BmrFI | CCNGG | 1 cut(s) | 160 |
| BmsI | GCATC | 1 cut(s) | 552 |
| BpiI | GAAGAC | 1 cut(s) | 170 |
| Bpu10I | CCTNAGC | 1 cut(s) | 616 |
| BpuMI | CCSGG | 1 cut(s) | 160 |
| BsaWI | WCCGGW | 1 cut(s) | 127 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 127, 158, 362, 464 |
| Bse3DI | GCAATG | 2 cut(s) | 177, 297 |
| BseAI | TCCGGA | 1 cut(s) | 127 |
| BseGI | GGATG | 5 cut(s) | 117, 124, 148, 271, 626 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 127, 158, 362, 464 |
| BseMI | GCAATG | 2 cut(s) | 177, 297 |
| BseMII | CTCAG | 2 cut(s) | 361, 630 |
| BseRI | GAGGAG | 2 cut(s) | 525, 528 |
| BseXI | GCAGC | 2 cut(s) | 274, 466 |
| BseYI | CCCAGC | 1 cut(s) | 191 |
| BsiSI | CCGG | 2 cut(s) | 128, 159 |
| BslFI | GGGAC | 1 cut(s) | 122 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 127, 158, 362, 464 |
| BsmAI | GTCTC | 1 cut(s) | 263 |
| BsmFI | GGGAC | 1 cut(s) | 122 |
| BsmI | GAATGC | 2 cut(s) | 323, 351 |
| Bsp13I | TCCGGA | 1 cut(s) | 127 |
| Bsp143I | GATC | 1 cut(s) | 503 |
| BspCNI | CTCAG | 2 cut(s) | 360, 629 |
| BspEI | TCCGGA | 1 cut(s) | 127 |
| BspPI | GGATC | 1 cut(s) | 498 |
| BspQI | GCTCTTC | 1 cut(s) | 177 |
| BsrDI | GCAATG | 2 cut(s) | 177, 297 |
| BssMI | GATC | 1 cut(s) | 503 |
| Bst4CI | ACNGT | 2 cut(s) | 401, 565 |
| Bst6I | CTCTTC | 2 cut(s) | 177, 228 |
| BstC8I | GCNNGC | 1 cut(s) | 84 |
| BstDEI | CTNAG | 2 cut(s) | 347, 616 |
| BstF5I | GGATG | 5 cut(s) | 117, 124, 148, 271, 626 |
| BstH2I | RGCGCY | 1 cut(s) | 480 |
| BstHHI | GCGC | 1 cut(s) | 479 |
| BstKTI | GATC | 1 cut(s) | 506 |
| BstMAI | GTCTC | 1 cut(s) | 263 |
| BstMBI | GATC | 1 cut(s) | 503 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 83, 188, 287 |
| BstNSI | RCATGY | 2 cut(s) | 200, 413 |
| BstSCI | CCNGG | 1 cut(s) | 158 |
| BstV1I | GCAGC | 2 cut(s) | 274, 466 |
| BstV2I | GAAGAC | 1 cut(s) | 170 |
| BtsCI | GGATG | 5 cut(s) | 117, 124, 148, 271, 626 |
| Cac8I | GCNNGC | 1 cut(s) | 84 |
| CfoI | GCGC | 1 cut(s) | 479 |
| Cfr13I | GGNCC | 1 cut(s) | 467 |
| CseI | GACGC | 1 cut(s) | 140 |
| Csp6I | GTAC | 1 cut(s) | 397 |
| CviAII | CATG | 4 cut(s) | 197, 322, 410, 473 |
| CviJI | RGCY | 9 cut(s) | 77, 86, 147, 170, 191, 275, 389, 416, 590 |
| CviKI_1 | RGCY | 9 cut(s) | 77, 86, 147, 170, 191, 275, 389, 416, 590 |
| CviQI | GTAC | 1 cut(s) | 397 |
| DdeI | CTNAG | 2 cut(s) | 347, 616 |
| DpnI | GATC | 1 cut(s) | 505 |
| DpnII | GATC | 1 cut(s) | 503 |
| Eam1104I | CTCTTC | 2 cut(s) | 177, 228 |
| EarI | CTCTTC | 2 cut(s) | 177, 228 |
| Eco32I | GATATC | 1 cut(s) | 422 |
| Eco47I | GGWCC | 1 cut(s) | 467 |
| EcoO109I | RGGNCCY | 1 cut(s) | 467 |
| EcoRV | GATATC | 1 cut(s) | 422 |
| EcoT22I | ATGCAT | 1 cut(s) | 323 |
| FaeI | CATG | 4 cut(s) | 200, 325, 413, 476 |
| FaiI | YATR | 8 cut(s) | 51, 198, 323, 411, 474, 527, 552, 670 |
| FaqI | GGGAC | 1 cut(s) | 122 |
| FatI | CATG | 4 cut(s) | 196, 321, 409, 472 |
| Fnu4HI | GCNGC | 2 cut(s) | 288, 480 |
| FokI | GGATG | 5 cut(s) | 104, 111, 135, 278, 613 |
| Fsp4HI | GCNGC | 2 cut(s) | 288, 480 |
| GlaI | GCGC | 1 cut(s) | 478 |
| GluI | GCNGC | 2 cut(s) | 288, 480 |
| GsaI | CCCAGC | 1 cut(s) | 195 |
| HaeII | RGCGCY | 1 cut(s) | 480 |
| HapII | CCGG | 2 cut(s) | 128, 159 |
| HgaI | GACGC | 1 cut(s) | 140 |
| HhaI | GCGC | 1 cut(s) | 479 |
| Hin1II | CATG | 4 cut(s) | 200, 325, 413, 476 |
| Hin6I | GCGC | 1 cut(s) | 477 |
| HinP1I | GCGC | 1 cut(s) | 477 |
| HinfI | GANTC | 1 cut(s) | 366 |
| HpaII | CCGG | 2 cut(s) | 128, 159 |
| Hpy166II | GTNNAC | 2 cut(s) | 62, 397 |
| Hpy188III | TCNNGA | 2 cut(s) | 128, 356 |
| Hpy8I | GTNNAC | 2 cut(s) | 62, 397 |
| HpyAV | CCTTC | 2 cut(s) | 594, 642 |
| HpyCH4III | ACNGT | 2 cut(s) | 401, 565 |
| HpyCH4V | TGCA | 7 cut(s) | 82, 104, 182, 290, 321, 482, 668 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 83, 188, 287 |
| HpyF3I | CTNAG | 2 cut(s) | 347, 616 |
| Hsp92II | CATG | 4 cut(s) | 200, 325, 413, 476 |
| HspAI | GCGC | 1 cut(s) | 477 |
| Kpn2I | TCCGGA | 1 cut(s) | 127 |
| Kzo9I | GATC | 1 cut(s) | 503 |
| LguI | GCTCTTC | 1 cut(s) | 177 |
| LpnPI | CCDG | 7 cut(s) | 24, 72, 141, 172, 177, 471, 603 |
| Lsp1109I | GCAGC | 2 cut(s) | 274, 466 |
| LweI | GCATC | 1 cut(s) | 552 |
| MaeIII | GTNAC | 3 cut(s) | 325, 433, 559 |
| MalI | GATC | 1 cut(s) | 505 |
| MboI | GATC | 1 cut(s) | 503 |
| MboII | GAAGA | 5 cut(s) | 164, 175, 245, 458, 587 |
| MfeI | CAATTG | 1 cut(s) | 493 |
| MluCI | AATT | 8 cut(s) | 8, 31, 215, 341, 493, 512, 580, 609 |
| MmeI | TCCRAC | 2 cut(s) | 145, 343 |
| MnlI | CCTC | 9 cut(s) | 67, 181, 229, 480, 543, 546, 549, 597, 646 |
| Mph1103I | ATGCAT | 1 cut(s) | 323 |
| MroI | TCCGGA | 1 cut(s) | 127 |
| MseI | TTAA | 3 cut(s) | 11, 452, 648 |
| MslI | CAYNNNNRTG | 1 cut(s) | 408 |
| MspI | CCGG | 2 cut(s) | 128, 159 |
| MspR9I | CCNGG | 1 cut(s) | 160 |
| MunI | CAATTG | 1 cut(s) | 493 |
| Mva1269I | GAATGC | 2 cut(s) | 323, 351 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 83, 188, 287 |
| NciI | CCSGG | 1 cut(s) | 160 |
| NdeII | GATC | 1 cut(s) | 503 |
| NlaIII | CATG | 4 cut(s) | 200, 325, 413, 476 |
| NmuCI | GTSAC | 1 cut(s) | 433 |
| NsiI | ATGCAT | 1 cut(s) | 323 |
| NspI | RCATGY | 2 cut(s) | 200, 413 |
| PciSI | GCTCTTC | 1 cut(s) | 177 |
| PctI | GAATGC | 2 cut(s) | 323, 351 |
| PfeI | GAWTC | 1 cut(s) | 366 |
| PfoI | TCCNGGA | 1 cut(s) | 158 |
| PkrI | GCNGC | 2 cut(s) | 289, 481 |
| PpuMI | RGGWCCY | 1 cut(s) | 467 |
| Psp5II | RGGWCCY | 1 cut(s) | 467 |
| PspFI | CCCAGC | 1 cut(s) | 191 |
| PspPI | GGNCC | 1 cut(s) | 467 |
| PspPPI | RGGWCCY | 1 cut(s) | 467 |
| RsaI | GTAC | 1 cut(s) | 398 |
| RsaNI | GTAC | 1 cut(s) | 397 |
| RseI | CAYNNNNRTG | 1 cut(s) | 408 |
| SapI | GCTCTTC | 1 cut(s) | 177 |
| SaqAI | TTAA | 3 cut(s) | 11, 452, 648 |
| SatI | GCNGC | 2 cut(s) | 288, 480 |
| Sau3AI | GATC | 1 cut(s) | 503 |
| Sau96I | GGNCC | 1 cut(s) | 467 |
| ScrFI | CCNGG | 1 cut(s) | 160 |
| SfaNI | GCATC | 1 cut(s) | 552 |
| SinI | GGWCC | 1 cut(s) | 467 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 408 |
| Sse9I | AATT | 8 cut(s) | 8, 31, 215, 341, 493, 512, 580, 609 |
| StyD4I | CCNGG | 1 cut(s) | 158 |
| TaaI | ACNGT | 2 cut(s) | 401, 565 |
| TaqI | TCGA | 3 cut(s) | 369, 418, 502 |
| TasI | AATT | 8 cut(s) | 8, 31, 215, 341, 493, 512, 580, 609 |
| TfiI | GAWTC | 1 cut(s) | 366 |
| Tru1I | TTAA | 3 cut(s) | 11, 452, 648 |
| Tru9I | TTAA | 3 cut(s) | 11, 452, 648 |
| TseFI | GTSAC | 1 cut(s) | 433 |
| TseI | GCWGC | 2 cut(s) | 287, 479 |
| Tsp45I | GTSAC | 1 cut(s) | 433 |
| TspDTI | ATGAA | 2 cut(s) | 308, 588 |
| TspGWI | ACGGA | 2 cut(s) | 421, 612 |
| VpaK11BI | GGWCC | 1 cut(s) | 467 |
| XapI | RAATTY | 3 cut(s) | 31, 512, 580 |
| XceI | RCATGY | 2 cut(s) | 200, 413 |
| Zsp2I | ATGCAT | 1 cut(s) | 323 |