protein ubiquitination
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| PGG | PF13962 | 78 - 188 | 1.2e-23 | Domain of unknown function |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 127 |
| AccB1I | GGYRCC | 1 cut(s) | 127 |
| AciI | CCGC | 1 cut(s) | 176 |
| AclWI | GGATC | 1 cut(s) | 596 |
| AfaI | GTAC | 3 cut(s) | 124, 129, 256 |
| AgsI | TTSAA | 3 cut(s) | 68, 101, 137 |
| AjnI | CCWGG | 2 cut(s) | 310, 688 |
| Alw21I | GWGCWC | 1 cut(s) | 271 |
| Alw26I | GTCTC | 1 cut(s) | 659 |
| AlwI | GGATC | 1 cut(s) | 596 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 179, 311 |
| Asp718I | GGTACC | 1 cut(s) | 127 |
| AspS9I | GGNCC | 1 cut(s) | 686 |
| AsuHPI | GGTGA | 3 cut(s) | 271, 338, 430 |
| AvaII | GGWCC | 1 cut(s) | 686 |
| BaeGI | GKGCMC | 1 cut(s) | 556 |
| BanI | GGYRCC | 1 cut(s) | 127 |
| Bbv12I | GWGCWC | 1 cut(s) | 271 |
| BccI | CCATC | 2 cut(s) | 290, 529 |
| BceAI | ACGGC | 1 cut(s) | 68 |
| BciT130I | CCWGG | 2 cut(s) | 312, 690 |
| BcoDI | GTCTC | 1 cut(s) | 659 |
| BfmI | CTRYAG | 1 cut(s) | 294 |
| BisI | GCNGC | 1 cut(s) | 177 |
| BlsI | GCNGC | 1 cut(s) | 178 |
| Bme1390I | CCNGG | 2 cut(s) | 312, 690 |
| Bme18I | GGWCC | 1 cut(s) | 686 |
| BmgT120I | GGNCC | 1 cut(s) | 686 |
| BmiI | GGNNCC | 1 cut(s) | 129 |
| BmrFI | CCNGG | 2 cut(s) | 312, 690 |
| BmrI | ACTGGG | 1 cut(s) | 617 |
| BmsI | GCATC | 1 cut(s) | 633 |
| BmuI | ACTGGG | 1 cut(s) | 617 |
| BsaJI | CCNNGG | 1 cut(s) | 716 |
| Bse1I | ACTGG | 2 cut(s) | 341, 623 |
| BseBI | CCWGG | 2 cut(s) | 312, 690 |
| BseDI | CCNNGG | 1 cut(s) | 716 |
| BseGI | GGATG | 1 cut(s) | 648 |
| BseMII | CTCAG | 1 cut(s) | 590 |
| BseNI | ACTGG | 2 cut(s) | 341, 623 |
| BseRI | GAGGAG | 1 cut(s) | 230 |
| BseSI | GKGCMC | 1 cut(s) | 556 |
| BshNI | GGYRCC | 1 cut(s) | 127 |
| BsiHKAI | GWGCWC | 1 cut(s) | 271 |
| BslFI | GGGAC | 2 cut(s) | 253, 605 |
| BsmAI | GTCTC | 1 cut(s) | 659 |
| BsmFI | GGGAC | 2 cut(s) | 253, 605 |
| BsmI | GAATGC | 1 cut(s) | 336 |
| Bsp1286I | GDGCHC | 2 cut(s) | 271, 556 |
| Bsp1407I | TGTACA | 1 cut(s) | 254 |
| Bsp143I | GATC | 1 cut(s) | 588 |
| BspACI | CCGC | 1 cut(s) | 176 |
| BspCNI | CTCAG | 1 cut(s) | 591 |
| BspHI | TCATGA | 1 cut(s) | 366 |
| BspLI | GGNNCC | 1 cut(s) | 129 |
| BspPI | GGATC | 1 cut(s) | 596 |
| BspT107I | GGYRCC | 1 cut(s) | 127 |
| BsrGI | TGTACA | 1 cut(s) | 254 |
| BsrI | ACTGG | 2 cut(s) | 341, 623 |
| BssECI | CCNNGG | 1 cut(s) | 716 |
| BssMI | GATC | 1 cut(s) | 588 |
| BssT1I | CCWWGG | 1 cut(s) | 716 |
| Bst2UI | CCWGG | 2 cut(s) | 312, 690 |
| Bst4CI | ACNGT | 4 cut(s) | 127, 259, 307, 326 |
| BstAUI | TGTACA | 1 cut(s) | 254 |
| BstC8I | GCNNGC | 1 cut(s) | 31 |
| BstDEI | CTNAG | 1 cut(s) | 599 |
| BstF5I | GGATG | 1 cut(s) | 648 |
| BstKTI | GATC | 1 cut(s) | 591 |
| BstMAI | GTCTC | 1 cut(s) | 659 |
| BstMBI | GATC | 1 cut(s) | 588 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 148, 527 |
| BstNI | CCWGG | 2 cut(s) | 312, 690 |
| BstNSI | RCATGY | 1 cut(s) | 33 |
| BstSCI | CCNGG | 2 cut(s) | 310, 688 |
| BstSFI | CTRYAG | 1 cut(s) | 294 |
| BstSLI | GKGCMC | 1 cut(s) | 556 |
| BtsCI | GGATG | 1 cut(s) | 648 |
| BtsIMutI | CAGTG | 2 cut(s) | 348, 630 |
| Cac8I | GCNNGC | 1 cut(s) | 31 |
| CaiI | CAGNNNCTG | 2 cut(s) | 179, 311 |
| CciI | TCATGA | 1 cut(s) | 366 |
| Cfr13I | GGNCC | 1 cut(s) | 686 |
| Csp6I | GTAC | 3 cut(s) | 123, 128, 255 |
| CviAII | CATG | 7 cut(s) | 16, 30, 143, 286, 367, 572, 585 |
| CviJI | RGCY | 3 cut(s) | 55, 179, 521 |
| CviKI_1 | RGCY | 3 cut(s) | 55, 179, 521 |
| CviQI | GTAC | 3 cut(s) | 123, 128, 255 |
| DdeI | CTNAG | 1 cut(s) | 599 |
| DpnI | GATC | 1 cut(s) | 590 |
| DpnII | GATC | 1 cut(s) | 588 |
| Eco130I | CCWWGG | 1 cut(s) | 716 |
| Eco47I | GGWCC | 1 cut(s) | 686 |
| EcoRII | CCWGG | 2 cut(s) | 310, 688 |
| EcoT14I | CCWWGG | 1 cut(s) | 716 |
| EcoT22I | ATGCAT | 1 cut(s) | 144 |
| ErhI | CCWWGG | 1 cut(s) | 716 |
| FaeI | CATG | 7 cut(s) | 19, 33, 146, 289, 370, 575, 588 |
| FaqI | GGGAC | 2 cut(s) | 253, 605 |
| FatI | CATG | 7 cut(s) | 15, 29, 142, 285, 366, 571, 584 |
| Fnu4HI | GCNGC | 1 cut(s) | 177 |
| FokI | GGATG | 1 cut(s) | 655 |
| Fsp4HI | GCNGC | 1 cut(s) | 177 |
| GluI | GCNGC | 1 cut(s) | 177 |
| Hin1II | CATG | 7 cut(s) | 19, 33, 146, 289, 370, 575, 588 |
| HinfI | GANTC | 1 cut(s) | 435 |
| HphI | GGTGA | 3 cut(s) | 271, 338, 430 |
| Hpy166II | GTNNAC | 1 cut(s) | 196 |
| Hpy188I | TCNGA | 2 cut(s) | 385, 600 |
| Hpy188III | TCNNGA | 2 cut(s) | 367, 664 |
| Hpy8I | GTNNAC | 1 cut(s) | 196 |
| HpyCH4III | ACNGT | 4 cut(s) | 127, 259, 307, 326 |
| HpyCH4IV | ACGT | 1 cut(s) | 448 |
| HpyCH4V | TGCA | 9 cut(s) | 29, 33, 74, 82, 88, 142, 455, 614, 646 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 148, 527 |
| HpyF3I | CTNAG | 1 cut(s) | 599 |
| HpySE526I | ACGT | 1 cut(s) | 448 |
| Hsp92II | CATG | 7 cut(s) | 19, 33, 146, 289, 370, 575, 588 |
| KpnI | GGTACC | 1 cut(s) | 131 |
| Kzo9I | GATC | 1 cut(s) | 588 |
| LpnPI | CCDG | 8 cut(s) | 297, 318, 324, 354, 503, 636, 675, 702 |
| LweI | GCATC | 1 cut(s) | 633 |
| MaeII | ACGT | 1 cut(s) | 448 |
| MaeIII | GTNAC | 5 cut(s) | 160, 277, 326, 393, 538 |
| MalI | GATC | 1 cut(s) | 590 |
| MboI | GATC | 1 cut(s) | 588 |
| MboII | GAAGA | 2 cut(s) | 396, 587 |
| MhlI | GDGCHC | 2 cut(s) | 271, 556 |
| MluCI | AATT | 2 cut(s) | 34, 166 |
| MmeI | TCCRAC | 1 cut(s) | 30 |
| MnlI | CCTC | 5 cut(s) | 208, 211, 449, 640, 663 |
| Mph1103I | ATGCAT | 1 cut(s) | 144 |
| MseI | TTAA | 2 cut(s) | 108, 209 |
| MslI | CAYNNNNRTG | 3 cut(s) | 284, 341, 488 |
| MspA1I | CMGCKG | 1 cut(s) | 176 |
| MspR9I | CCNGG | 2 cut(s) | 312, 690 |
| Mva1269I | GAATGC | 1 cut(s) | 336 |
| MvaI | CCWGG | 2 cut(s) | 312, 690 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 148, 527 |
| NdeII | GATC | 1 cut(s) | 588 |
| NlaIII | CATG | 7 cut(s) | 19, 33, 146, 289, 370, 575, 588 |
| NlaIV | GGNNCC | 1 cut(s) | 129 |
| NmuCI | GTSAC | 4 cut(s) | 277, 326, 393, 538 |
| NsiI | ATGCAT | 1 cut(s) | 144 |
| NspI | RCATGY | 1 cut(s) | 33 |
| PaeI | GCATGC | 1 cut(s) | 33 |
| PagI | TCATGA | 1 cut(s) | 366 |
| PctI | GAATGC | 1 cut(s) | 336 |
| PfeI | GAWTC | 1 cut(s) | 435 |
| PkrI | GCNGC | 1 cut(s) | 178 |
| Psp6I | CCWGG | 2 cut(s) | 310, 688 |
| PspGI | CCWGG | 2 cut(s) | 310, 688 |
| PspN4I | GGNNCC | 1 cut(s) | 129 |
| PspPI | GGNCC | 1 cut(s) | 686 |
| PstNI | CAGNNNCTG | 2 cut(s) | 179, 311 |
| RsaI | GTAC | 3 cut(s) | 124, 129, 256 |
| RsaNI | GTAC | 3 cut(s) | 123, 128, 255 |
| RseI | CAYNNNNRTG | 3 cut(s) | 284, 341, 488 |
| SaqAI | TTAA | 2 cut(s) | 108, 209 |
| SatI | GCNGC | 1 cut(s) | 177 |
| Sau3AI | GATC | 1 cut(s) | 588 |
| Sau96I | GGNCC | 1 cut(s) | 686 |
| ScrFI | CCNGG | 2 cut(s) | 312, 690 |
| SduI | GDGCHC | 2 cut(s) | 271, 556 |
| SetI | ASST | 5 cut(s) | 73, 133, 451, 502, 718 |
| SfaNI | GCATC | 1 cut(s) | 633 |
| SfcI | CTRYAG | 1 cut(s) | 294 |
| SinI | GGWCC | 1 cut(s) | 686 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 284, 341, 488 |
| SphI | GCATGC | 1 cut(s) | 33 |
| Sse9I | AATT | 2 cut(s) | 34, 166 |
| SsiI | CCGC | 1 cut(s) | 176 |
| SspI | AATATT | 2 cut(s) | 581, 696 |
| StyD4I | CCNGG | 2 cut(s) | 310, 688 |
| StyI | CCWWGG | 1 cut(s) | 716 |
| TaaI | ACNGT | 4 cut(s) | 127, 259, 307, 326 |
| TaiI | ACGT | 1 cut(s) | 451 |
| TaqI | TCGA | 2 cut(s) | 170, 663 |
| TasI | AATT | 2 cut(s) | 34, 166 |
| TatI | WGTACW | 1 cut(s) | 254 |
| TauI | GCSGC | 1 cut(s) | 179 |
| TfiI | GAWTC | 1 cut(s) | 435 |
| Tru1I | TTAA | 2 cut(s) | 108, 209 |
| Tru9I | TTAA | 2 cut(s) | 108, 209 |
| TscAI | CASTG | 2 cut(s) | 348, 630 |
| TseFI | GTSAC | 4 cut(s) | 277, 326, 393, 538 |
| Tsp45I | GTSAC | 4 cut(s) | 277, 326, 393, 538 |
| TspDTI | ATGAA | 6 cut(s) | 248, 337, 355, 560, 573, 661 |
| TspRI | CASTG | 2 cut(s) | 348, 630 |
| VpaK11BI | GGWCC | 1 cut(s) | 686 |
| XceI | RCATGY | 1 cut(s) | 33 |
| Zsp2I | ATGCAT | 1 cut(s) | 144 |