protein ubiquitination
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 1375 |
| AccBSI | CCGCTC | 1 cut(s) | 1133 |
| AccII | CGCG | 3 cut(s) | 78, 722, 2107 |
| AccIII | TCCGGA | 1 cut(s) | 2062 |
| AclWI | GGATC | 2 cut(s) | 1027, 2076 |
| AcoI | YGGCCR | 2 cut(s) | 1209, 2454 |
| AcsI | RAATTY | 3 cut(s) | 1295, 1647, 2273 |
| AcuI | CTGAAG | 1 cut(s) | 2328 |
| AcyI | GRCGYC | 1 cut(s) | 414 |
| AfaI | GTAC | 5 cut(s) | 855, 919, 1261, 1671, 2185 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 772, 1798 |
| AflII | CTTAAG | 1 cut(s) | 1276 |
| AgeI | ACCGGT | 1 cut(s) | 2540 |
| AjnI | CCWGG | 2 cut(s) | 266, 304 |
| Alw21I | GWGCWC | 1 cut(s) | 2200 |
| Alw26I | GTCTC | 5 cut(s) | 374, 470, 545, 566, 1535 |
| AlwI | GGATC | 2 cut(s) | 1027, 2076 |
| Ama87I | CYCGRG | 1 cut(s) | 770 |
| Aor13HI | TCCGGA | 1 cut(s) | 2062 |
| AoxI | GGCC | 3 cut(s) | 1209, 2454, 2481 |
| ApeKI | GCWGC | 7 cut(s) | 5, 213, 788, 1638, 1742, 2222, 2225 |
| ApoI | RAATTY | 3 cut(s) | 1295, 1647, 2273 |
| AsiGI | ACCGGT | 1 cut(s) | 2540 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 2394 |
| AspS9I | GGNCC | 2 cut(s) | 1364, 2482 |
| AsuC2I | CCSGG | 1 cut(s) | 2241 |
| AsuHPI | GGTGA | 8 cut(s) | 320, 416, 512, 608, 686, 1025, 1962, 2530 |
| AvaI | CYCGRG | 1 cut(s) | 770 |
| AvaII | GGWCC | 1 cut(s) | 1364 |
| BalI | TGGCCA | 2 cut(s) | 1211, 2456 |
| BbsI | GAAGAC | 2 cut(s) | 696, 2423 |
| Bbv12I | GWGCWC | 1 cut(s) | 2200 |
| BbvI | GCAGC | 6 cut(s) | 200, 800, 1650, 1754, 2209, 2237 |
| BccI | CCATC | 7 cut(s) | 355, 451, 671, 802, 838, 950, 1439 |
| BceAI | ACGGC | 3 cut(s) | 820, 853, 1081 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 2075, 2109 |
| BciT130I | CCWGG | 2 cut(s) | 268, 306 |
| BcnI | CCSGG | 1 cut(s) | 2241 |
| BcoDI | GTCTC | 5 cut(s) | 374, 470, 545, 566, 1535 |
| BfaI | CTAG | 2 cut(s) | 1652, 2058 |
| BfmI | CTRYAG | 2 cut(s) | 2223, 2502 |
| BfrI | CTTAAG | 1 cut(s) | 1276 |
| BfuAI | ACCTGC | 1 cut(s) | 1375 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 272 |
| BlpI | GCTNAGC | 1 cut(s) | 618 |
| BmcAI | AGTACT | 1 cut(s) | 1671 |
| Bme1390I | CCNGG | 3 cut(s) | 268, 306, 2241 |
| Bme18I | GGWCC | 1 cut(s) | 1364 |
| BmeT110I | CYCGRG | 1 cut(s) | 770 |
| BmgT120I | GGNCC | 2 cut(s) | 1364, 2482 |
| BmrFI | CCNGG | 3 cut(s) | 268, 306, 2241 |
| BmrI | ACTGGG | 2 cut(s) | 5, 15 |
| BmsI | GCATC | 5 cut(s) | 214, 604, 823, 1465, 2559 |
| BmuI | ACTGGG | 2 cut(s) | 5, 15 |
| BpiI | GAAGAC | 2 cut(s) | 696, 2423 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 2102, 2134 |
| BpmI | CTGGAG | 1 cut(s) | 289 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 618 |
| BpuMI | CCSGG | 1 cut(s) | 2241 |
| BsaAI | YACGTR | 1 cut(s) | 1997 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1020 |
| BsaHI | GRCGYC | 1 cut(s) | 414 |
| BsaI | GGTCTC | 1 cut(s) | 1535 |
| BsaJI | CCNNGG | 7 cut(s) | 186, 304, 771, 1377, 2451, 2478, 2653 |
| BsaWI | WCCGGW | 2 cut(s) | 2062, 2540 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 772, 1798 |
| Bse118I | RCCGGY | 2 cut(s) | 1287, 2540 |
| Bse1I | ACTGG | 4 cut(s) | 11, 21, 1083, 1777 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1020 |
| BseAI | TCCGGA | 1 cut(s) | 2062 |
| BseBI | CCWGG | 2 cut(s) | 268, 306 |
| BseDI | CCNNGG | 7 cut(s) | 186, 304, 771, 1377, 2451, 2478, 2653 |
| BseGI | GGATG | 4 cut(s) | 667, 849, 1198, 2574 |
| BseJI | GATNNNNATC | 1 cut(s) | 1020 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 772, 1798 |
| BseNI | ACTGG | 4 cut(s) | 11, 21, 1083, 1777 |
| BseXI | GCAGC | 6 cut(s) | 200, 800, 1650, 1754, 2209, 2237 |
| Bsh1236I | CGCG | 3 cut(s) | 78, 722, 2107 |
| Bsh1285I | CGRYCG | 1 cut(s) | 966 |
| BshFI | GGCC | 3 cut(s) | 1211, 2456, 2483 |
| BshTI | ACCGGT | 1 cut(s) | 2540 |
| BsiEI | CGRYCG | 1 cut(s) | 966 |
| BsiHKAI | GWGCWC | 1 cut(s) | 2200 |
| BsiHKCI | CYCGRG | 1 cut(s) | 770 |
| BsiSI | CCGG | 5 cut(s) | 947, 1288, 2063, 2241, 2541 |
| BslFI | GGGAC | 4 cut(s) | 2, 917, 973, 1974 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 772, 1798 |
| BsmAI | GTCTC | 5 cut(s) | 374, 470, 545, 566, 1535 |
| BsmBI | CGTCTC | 2 cut(s) | 545, 566 |
| BsmFI | GGGAC | 4 cut(s) | 2, 917, 973, 1974 |
| BsmI | GAATGC | 3 cut(s) | 917, 1271, 2228 |
| BsnI | GGCC | 3 cut(s) | 1211, 2456, 2483 |
| Bso31I | GGTCTC | 1 cut(s) | 1535 |
| BsoBI | CYCGRG | 1 cut(s) | 770 |
| Bsp1286I | GDGCHC | 1 cut(s) | 2200 |
| Bsp13I | TCCGGA | 1 cut(s) | 2062 |
| Bsp1407I | TGTACA | 3 cut(s) | 853, 1259, 2183 |
| Bsp143I | GATC | 4 cut(s) | 27, 598, 1032, 2068 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 618 |
| Bsp19I | CCATGG | 1 cut(s) | 1377 |
| BspANI | GGCC | 3 cut(s) | 1211, 2456, 2483 |
| BspEI | TCCGGA | 1 cut(s) | 2062 |
| BspFNI | CGCG | 3 cut(s) | 78, 722, 2107 |
| BspHI | TCATGA | 1 cut(s) | 1914 |
| BspMAI | CTGCAG | 2 cut(s) | 2227, 2506 |
| BspMI | ACCTGC | 1 cut(s) | 1375 |
| BspPI | GGATC | 2 cut(s) | 1027, 2076 |
| BspTI | CTTAAG | 1 cut(s) | 1276 |
| BspTNI | GGTCTC | 1 cut(s) | 1535 |
| BsrBI | CCGCTC | 1 cut(s) | 1133 |
| BsrFI | RCCGGY | 2 cut(s) | 1287, 2540 |
| BsrGI | TGTACA | 3 cut(s) | 853, 1259, 2183 |
| BsrI | ACTGG | 4 cut(s) | 11, 21, 1083, 1777 |
| BssAI | RCCGGY | 2 cut(s) | 1287, 2540 |
| BssECI | CCNNGG | 7 cut(s) | 186, 304, 771, 1377, 2451, 2478, 2653 |
| BssMI | GATC | 4 cut(s) | 27, 598, 1032, 2068 |
| BssNI | GRCGYC | 1 cut(s) | 414 |
| BssT1I | CCWWGG | 2 cut(s) | 1377, 2653 |
| Bst2UI | CCWGG | 2 cut(s) | 268, 306 |
| Bst4CI | ACNGT | 5 cut(s) | 556, 814, 964, 2188, 2236 |
| Bst6I | CTCTTC | 2 cut(s) | 462, 2653 |
| BstACI | GRCGYC | 1 cut(s) | 414 |
| BstAFI | CTTAAG | 1 cut(s) | 1276 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 833 |
| BstAUI | TGTACA | 3 cut(s) | 853, 1259, 2183 |
| BstBAI | YACGTR | 1 cut(s) | 1997 |
| BstC8I | GCNNGC | 4 cut(s) | 983, 1180, 1289, 2094 |
| BstDSI | CCRYGG | 2 cut(s) | 1377, 2451 |
| BstF5I | GGATG | 4 cut(s) | 667, 849, 1198, 2574 |
| BstFNI | CGCG | 3 cut(s) | 78, 722, 2107 |
| BstKTI | GATC | 4 cut(s) | 30, 601, 1035, 2071 |
| BstMAI | GTCTC | 5 cut(s) | 374, 470, 545, 566, 1535 |
| BstMBI | GATC | 4 cut(s) | 27, 598, 1032, 2068 |
| BstMCI | CGRYCG | 1 cut(s) | 966 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 197, 263, 272, 833 |
| BstNI | CCWGG | 2 cut(s) | 268, 306 |
| BstNSI | RCATGY | 4 cut(s) | 200, 1260, 1663, 2096 |
| BstSCI | CCNGG | 3 cut(s) | 266, 304, 2239 |
| BstSFI | CTRYAG | 2 cut(s) | 2223, 2502 |
| BstUI | CGCG | 3 cut(s) | 78, 722, 2107 |
| BstV1I | GCAGC | 6 cut(s) | 200, 800, 1650, 1754, 2209, 2237 |
| BstV2I | GAAGAC | 2 cut(s) | 696, 2423 |
| BstX2I | RGATCY | 1 cut(s) | 2068 |
| BstYI | RGATCY | 1 cut(s) | 2068 |
| BsuRI | GGCC | 3 cut(s) | 1211, 2456, 2483 |
| BtgI | CCRYGG | 2 cut(s) | 1377, 2451 |
| BtsCI | GGATG | 4 cut(s) | 667, 849, 1198, 2574 |
| BtsI | GCAGTG | 1 cut(s) | 616 |
| BtsIMutI | CAGTG | 2 cut(s) | 129, 616 |
| BveI | ACCTGC | 1 cut(s) | 1375 |
| Cac8I | GCNNGC | 4 cut(s) | 983, 1180, 1289, 2094 |
| CciI | TCATGA | 1 cut(s) | 1914 |
| Cfr10I | RCCGGY | 2 cut(s) | 1287, 2540 |
| Cfr13I | GGNCC | 2 cut(s) | 1364, 2482 |
| CseI | GACGC | 3 cut(s) | 67, 422, 2324 |
| Csp6I | GTAC | 5 cut(s) | 854, 918, 1260, 1670, 2184 |
| CspAI | ACCGGT | 1 cut(s) | 2540 |
| CviQI | GTAC | 5 cut(s) | 854, 918, 1260, 1670, 2184 |
| DpnI | GATC | 4 cut(s) | 29, 600, 1034, 2070 |
| DpnII | GATC | 4 cut(s) | 27, 598, 1032, 2068 |
| DraI | TTTAAA | 2 cut(s) | 232, 1783 |
| EaeI | YGGCCR | 2 cut(s) | 1209, 2454 |
| Eam1104I | CTCTTC | 2 cut(s) | 462, 2653 |
| EarI | CTCTTC | 2 cut(s) | 462, 2653 |
| EciI | GGCGGA | 1 cut(s) | 1013 |
| Eco130I | CCWWGG | 2 cut(s) | 1377, 2653 |
| Eco31I | GGTCTC | 1 cut(s) | 1535 |
| Eco32I | GATATC | 1 cut(s) | 296 |
| Eco47I | GGWCC | 1 cut(s) | 1364 |
| Eco57I | CTGAAG | 1 cut(s) | 2328 |
| Eco88I | CYCGRG | 1 cut(s) | 770 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1364 |
| EcoRII | CCWGG | 2 cut(s) | 266, 304 |
| EcoRV | GATATC | 1 cut(s) | 296 |
| EcoT14I | CCWWGG | 2 cut(s) | 1377, 2653 |
| ErhI | CCWWGG | 2 cut(s) | 1377, 2653 |
| Esp3I | CGTCTC | 2 cut(s) | 545, 566 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 271, 303, 585, 617 |
| FaqI | GGGAC | 4 cut(s) | 2, 917, 973, 1974 |
| FauNDI | CATATG | 1 cut(s) | 1953 |
| FokI | GGATG | 4 cut(s) | 674, 856, 1185, 2581 |
| FspBI | CTAG | 2 cut(s) | 1652, 2058 |
| GsuI | CTGGAG | 1 cut(s) | 289 |
| HaeIII | GGCC | 3 cut(s) | 1211, 2456, 2483 |
| HapII | CCGG | 5 cut(s) | 947, 1288, 2063, 2241, 2541 |
| HgaI | GACGC | 3 cut(s) | 67, 422, 2324 |
| Hin1I | GRCGYC | 1 cut(s) | 414 |
| HincII | GTYRAC | 1 cut(s) | 34 |
| HindII | GTYRAC | 1 cut(s) | 34 |
| HindIII | AAGCTT | 1 cut(s) | 1204 |
| HinfI | GANTC | 3 cut(s) | 644, 1600, 2507 |
| HpaII | CCGG | 5 cut(s) | 947, 1288, 2063, 2241, 2541 |
| HphI | GGTGA | 8 cut(s) | 320, 416, 512, 608, 686, 1025, 1962, 2530 |
| Hpy166II | GTNNAC | 5 cut(s) | 34, 1262, 1723, 1789, 2083 |
| Hpy188I | TCNGA | 5 cut(s) | 649, 799, 1052, 1231, 2436 |
| Hpy188III | TCNNGA | 9 cut(s) | 241, 758, 1025, 1192, 1351, 1915, 2063, 2072, 2278 |
| Hpy8I | GTNNAC | 5 cut(s) | 34, 1262, 1723, 1789, 2083 |
| Hpy99I | CGWCG | 2 cut(s) | 83, 806 |
| HpyAV | CCTTC | 9 cut(s) | 395, 491, 587, 988, 1004, 1275, 1355, 1502, 2280 |
| HpyCH4III | ACNGT | 5 cut(s) | 556, 814, 964, 2188, 2236 |
| HpyCH4IV | ACGT | 6 cut(s) | 160, 1320, 1428, 1996, 2156, 2377 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 197, 263, 272, 833 |
| HpySE526I | ACGT | 6 cut(s) | 160, 1320, 1428, 1996, 2156, 2377 |
| Hsp92I | GRCGYC | 1 cut(s) | 414 |
| Kpn2I | TCCGGA | 1 cut(s) | 2062 |
| KroI | GCCGGC | 1 cut(s) | 1287 |
| KroNI | GCCGGC | 1 cut(s) | 1289 |
| Kzo9I | GATC | 4 cut(s) | 27, 598, 1032, 2068 |
| LmnI | GCTCC | 3 cut(s) | 796, 1000, 1052 |
| Lsp1109I | GCAGC | 6 cut(s) | 200, 800, 1650, 1754, 2209, 2237 |
| LweI | GCATC | 5 cut(s) | 214, 604, 823, 1465, 2559 |
| MaeI | CTAG | 2 cut(s) | 1652, 2058 |
| MaeII | ACGT | 6 cut(s) | 160, 1320, 1428, 1996, 2156, 2377 |
| MaeIII | GTNAC | 3 cut(s) | 1543, 1697, 2206 |
| MalI | GATC | 4 cut(s) | 29, 600, 1034, 2070 |
| MbiI | CCGCTC | 1 cut(s) | 1133 |
| MboI | GATC | 4 cut(s) | 27, 598, 1032, 2068 |
| MfeI | CAATTG | 1 cut(s) | 2550 |
| MflI | RGATCY | 1 cut(s) | 2068 |
| MhlI | GDGCHC | 1 cut(s) | 2200 |
| MlsI | TGGCCA | 2 cut(s) | 1211, 2456 |
| MluNI | TGGCCA | 2 cut(s) | 1211, 2456 |
| MlyI | GAGTC | 2 cut(s) | 653, 2501 |
| MmeI | TCCRAC | 3 cut(s) | 1520, 1901, 2025 |
| Mox20I | TGGCCA | 2 cut(s) | 1211, 2456 |
| MroI | TCCGGA | 1 cut(s) | 2062 |
| MroNI | GCCGGC | 1 cut(s) | 1287 |
| MroXI | GAANNNNTTC | 1 cut(s) | 2394 |
| MscI | TGGCCA | 2 cut(s) | 1211, 2456 |
| MslI | CAYNNNNRTG | 4 cut(s) | 1011, 1506, 2462, 2563 |
| Msp20I | TGGCCA | 2 cut(s) | 1211, 2456 |
| MspCI | CTTAAG | 1 cut(s) | 1276 |
| MspI | CCGG | 5 cut(s) | 947, 1288, 2063, 2241, 2541 |
| MspR9I | CCNGG | 3 cut(s) | 268, 306, 2241 |
| MunI | CAATTG | 1 cut(s) | 2550 |
| Mva1269I | GAATGC | 3 cut(s) | 917, 1271, 2228 |
| MvaI | CCWGG | 2 cut(s) | 268, 306 |
| MvnI | CGCG | 3 cut(s) | 78, 722, 2107 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 197, 263, 272, 833 |
| NaeI | GCCGGC | 1 cut(s) | 1289 |
| NciI | CCSGG | 1 cut(s) | 2241 |
| NcoI | CCATGG | 1 cut(s) | 1377 |
| NdeI | CATATG | 1 cut(s) | 1953 |
| NdeII | GATC | 4 cut(s) | 27, 598, 1032, 2068 |
| NgoMIV | GCCGGC | 1 cut(s) | 1287 |
| NmeAIII | GCCGAG | 3 cut(s) | 211, 1548, 2459 |
| NmuCI | GTSAC | 1 cut(s) | 1697 |
| NspI | RCATGY | 4 cut(s) | 200, 1260, 1663, 2096 |
| PaeI | GCATGC | 1 cut(s) | 2096 |
| PagI | TCATGA | 1 cut(s) | 1914 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 420, 516 |
| PctI | GAATGC | 3 cut(s) | 917, 1271, 2228 |
| PdiI | GCCGGC | 1 cut(s) | 1289 |
| PdmI | GAANNNNTTC | 1 cut(s) | 2394 |
| PfeI | GAWTC | 1 cut(s) | 1600 |
| PinAI | ACCGGT | 1 cut(s) | 2540 |
| PleI | GAGTC | 2 cut(s) | 652, 2501 |
| PpsI | GAGTC | 2 cut(s) | 652, 2501 |
| Ppu21I | YACGTR | 1 cut(s) | 1997 |
| PpuMI | RGGWCCY | 1 cut(s) | 1364 |
| Psp5II | RGGWCCY | 1 cut(s) | 1364 |
| Psp6I | CCWGG | 2 cut(s) | 266, 304 |
| PspGI | CCWGG | 2 cut(s) | 266, 304 |
| PspPI | GGNCC | 2 cut(s) | 1364, 2482 |
| PspPPI | RGGWCCY | 1 cut(s) | 1364 |
| PstI | CTGCAG | 2 cut(s) | 2227, 2506 |
| PsuI | RGATCY | 1 cut(s) | 2068 |
| RsaI | GTAC | 5 cut(s) | 855, 919, 1261, 1671, 2185 |
| RsaNI | GTAC | 5 cut(s) | 854, 918, 1260, 1670, 2184 |
| RseI | CAYNNNNRTG | 4 cut(s) | 1011, 1506, 2462, 2563 |
| Sau3AI | GATC | 4 cut(s) | 27, 598, 1032, 2068 |
| Sau96I | GGNCC | 2 cut(s) | 1364, 2482 |
| ScaI | AGTACT | 1 cut(s) | 1671 |
| SchI | GAGTC | 2 cut(s) | 653, 2501 |
| ScrFI | CCNGG | 3 cut(s) | 268, 306, 2241 |
| SduI | GDGCHC | 1 cut(s) | 2200 |
| SfaNI | GCATC | 5 cut(s) | 214, 604, 823, 1465, 2559 |
| SfcI | CTRYAG | 2 cut(s) | 2223, 2502 |
| SinI | GGWCC | 1 cut(s) | 1364 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 1011, 1506, 2462, 2563 |
| SmlI | CTYRAG | 1 cut(s) | 1276 |
| SmoI | CTYRAG | 1 cut(s) | 1276 |
| SphI | GCATGC | 1 cut(s) | 2096 |
| SspI | AATATT | 2 cut(s) | 742, 1582 |
| SspMI | CTAG | 2 cut(s) | 1652, 2058 |
| StyD4I | CCNGG | 3 cut(s) | 266, 304, 2239 |
| StyI | CCWWGG | 2 cut(s) | 1377, 2653 |
| TaaI | ACNGT | 5 cut(s) | 556, 814, 964, 2188, 2236 |
| TaiI | ACGT | 6 cut(s) | 163, 1323, 1431, 1999, 2159, 2380 |
| TaqI | TCGA | 5 cut(s) | 81, 831, 966, 1421, 1848 |
| TatI | WGTACW | 4 cut(s) | 853, 1259, 1669, 2183 |
| TauI | GCSGC | 4 cut(s) | 625, 722, 1133, 2006 |
| TfiI | GAWTC | 1 cut(s) | 1600 |
| TscAI | CASTG | 2 cut(s) | 136, 616 |
| TseFI | GTSAC | 1 cut(s) | 1697 |
| TseI | GCWGC | 7 cut(s) | 5, 213, 788, 1638, 1742, 2222, 2225 |
| Tsp45I | GTSAC | 1 cut(s) | 1697 |
| TspGWI | ACGGA | 3 cut(s) | 1467, 1589, 2440 |
| TspRI | CASTG | 2 cut(s) | 136, 616 |
| Vha464I | CTTAAG | 1 cut(s) | 1276 |
| VpaK11BI | GGWCC | 1 cut(s) | 1364 |
| XapI | RAATTY | 3 cut(s) | 1295, 1647, 2273 |
| XceI | RCATGY | 4 cut(s) | 200, 1260, 1663, 2096 |
| XmnI | GAANNNNTTC | 1 cut(s) | 2394 |
| XspI | CTAG | 2 cut(s) | 1652, 2058 |
| ZrmI | AGTACT | 1 cut(s) | 1671 |