protein ubiquitination
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccIII | TCCGGA | 1 cut(s) | 78 |
| AciI | CCGC | 2 cut(s) | 225, 845 |
| AcoI | YGGCCR | 1 cut(s) | 288 |
| AcuI | CTGAAG | 2 cut(s) | 123, 339 |
| AfaI | GTAC | 3 cut(s) | 341, 881, 945 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 311, 841 |
| AgsI | TTSAA | 3 cut(s) | 434, 488, 620 |
| AhlI | ACTAGT | 1 cut(s) | 20 |
| AjnI | CCWGG | 1 cut(s) | 275 |
| AluBI | AGCT | 9 cut(s) | 8, 101, 164, 272, 308, 455, 511, 560, 572 |
| AluI | AGCT | 9 cut(s) | 8, 101, 164, 272, 308, 455, 511, 560, 572 |
| Alw26I | GTCTC | 2 cut(s) | 475, 717 |
| Aor13HI | TCCGGA | 1 cut(s) | 78 |
| AoxI | GGCC | 1 cut(s) | 288 |
| ApeKI | GCWGC | 4 cut(s) | 5, 272, 383, 508 |
| AspLEI | GCGC | 1 cut(s) | 834 |
| AspS9I | GGNCC | 2 cut(s) | 314, 754 |
| AsuHPI | GGTGA | 1 cut(s) | 805 |
| AvaII | GGWCC | 2 cut(s) | 314, 754 |
| BaeGI | GKGCMC | 1 cut(s) | 257 |
| BbsI | GAAGAC | 1 cut(s) | 531 |
| BbvI | GCAGC | 4 cut(s) | 17, 259, 370, 520 |
| BccI | CCATC | 1 cut(s) | 843 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 244, 278 |
| BciT130I | CCWGG | 1 cut(s) | 277 |
| BciVI | GTATCC | 1 cut(s) | 274 |
| BcoDI | GTCTC | 2 cut(s) | 475, 717 |
| BcuI | ACTAGT | 1 cut(s) | 20 |
| BfaI | CTAG | 3 cut(s) | 21, 539, 961 |
| BfmI | CTRYAG | 1 cut(s) | 690 |
| BfoI | RGCGCY | 1 cut(s) | 835 |
| BfuI | GTATCC | 1 cut(s) | 274 |
| BglII | AGATCT | 1 cut(s) | 106 |
| BisI | GCNGC | 5 cut(s) | 6, 273, 384, 509, 846 |
| BlsI | GCNGC | 5 cut(s) | 7, 274, 385, 510, 847 |
| Bme1390I | CCNGG | 1 cut(s) | 277 |
| Bme18I | GGWCC | 2 cut(s) | 314, 754 |
| BmgT120I | GGNCC | 2 cut(s) | 314, 754 |
| BmrFI | CCNGG | 1 cut(s) | 277 |
| BmrI | ACTGGG | 1 cut(s) | 35 |
| BmsI | GCATC | 5 cut(s) | 181, 316, 370, 915, 927 |
| BmuI | ACTGGG | 1 cut(s) | 35 |
| BpiI | GAAGAC | 1 cut(s) | 531 |
| BpmI | CTGGAG | 1 cut(s) | 770 |
| BpuEI | CTTGAG | 1 cut(s) | 294 |
| Bsa29I | ATCGAT | 1 cut(s) | 923 |
| BsaAI | YACGTR | 1 cut(s) | 879 |
| BsaJI | CCNNGG | 3 cut(s) | 195, 276, 387 |
| BsaWI | WCCGGW | 1 cut(s) | 78 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 124, 154 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 311, 841 |
| Bse118I | RCCGGY | 1 cut(s) | 767 |
| Bse1I | ACTGG | 3 cut(s) | 41, 52, 744 |
| Bse3DI | GCAATG | 1 cut(s) | 714 |
| BseAI | TCCGGA | 1 cut(s) | 78 |
| BseBI | CCWGG | 1 cut(s) | 277 |
| BseCI | ATCGAT | 1 cut(s) | 923 |
| BseDI | CCNNGG | 3 cut(s) | 195, 276, 387 |
| BseGI | GGATG | 3 cut(s) | 385, 406, 835 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 311, 841 |
| BseMI | GCAATG | 1 cut(s) | 714 |
| BseMII | CTCAG | 3 cut(s) | 249, 402, 728 |
| BseNI | ACTGG | 3 cut(s) | 41, 52, 744 |
| BseRI | GAGGAG | 1 cut(s) | 600 |
| BseSI | GKGCMC | 1 cut(s) | 257 |
| BseXI | GCAGC | 4 cut(s) | 17, 259, 370, 520 |
| BseYI | CCCAGC | 1 cut(s) | 304 |
| BsgI | GTGCAG | 1 cut(s) | 527 |
| BshFI | GGCC | 1 cut(s) | 290 |
| BshVI | ATCGAT | 1 cut(s) | 923 |
| BsiSI | CCGG | 2 cut(s) | 79, 768 |
| BslFI | GGGAC | 2 cut(s) | 128, 463 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 311, 841 |
| BsmAI | GTCTC | 2 cut(s) | 475, 717 |
| BsmFI | GGGAC | 2 cut(s) | 128, 463 |
| BsmI | GAATGC | 1 cut(s) | 642 |
| BsnI | GGCC | 1 cut(s) | 290 |
| Bsp1286I | GDGCHC | 1 cut(s) | 257 |
| Bsp13I | TCCGGA | 1 cut(s) | 78 |
| Bsp1407I | TGTACA | 1 cut(s) | 339 |
| Bsp143I | GATC | 2 cut(s) | 106, 261 |
| Bsp19I | CCATGG | 1 cut(s) | 387 |
| BspACI | CCGC | 2 cut(s) | 225, 845 |
| BspANI | GGCC | 1 cut(s) | 290 |
| BspCNI | CTCAG | 3 cut(s) | 250, 403, 727 |
| BspDI | ATCGAT | 1 cut(s) | 923 |
| BspEI | TCCGGA | 1 cut(s) | 78 |
| BspQI | GCTCTTC | 1 cut(s) | 462 |
| BsrDI | GCAATG | 1 cut(s) | 714 |
| BsrFI | RCCGGY | 1 cut(s) | 767 |
| BsrGI | TGTACA | 1 cut(s) | 339 |
| BsrI | ACTGG | 3 cut(s) | 41, 52, 744 |
| BssAI | RCCGGY | 1 cut(s) | 767 |
| BssECI | CCNNGG | 3 cut(s) | 195, 276, 387 |
| BssMI | GATC | 2 cut(s) | 106, 261 |
| BssT1I | CCWWGG | 2 cut(s) | 195, 387 |
| Bst2UI | CCWGG | 1 cut(s) | 277 |
| Bst4CI | ACNGT | 1 cut(s) | 16 |
| Bst6I | CTCTTC | 1 cut(s) | 462 |
| BstAUI | TGTACA | 1 cut(s) | 339 |
| BstBAI | YACGTR | 1 cut(s) | 879 |
| BstDEI | CTNAG | 6 cut(s) | 165, 258, 411, 529, 638, 714 |
| BstDSI | CCRYGG | 1 cut(s) | 387 |
| BstF5I | GGATG | 3 cut(s) | 385, 406, 835 |
| BstH2I | RGCGCY | 1 cut(s) | 835 |
| BstHHI | GCGC | 1 cut(s) | 834 |
| BstKTI | GATC | 2 cut(s) | 109, 264 |
| BstMAI | GTCTC | 2 cut(s) | 475, 717 |
| BstMBI | GATC | 2 cut(s) | 106, 261 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 272 |
| BstNI | CCWGG | 1 cut(s) | 277 |
| BstNSI | RCATGY | 1 cut(s) | 346 |
| BstSCI | CCNGG | 1 cut(s) | 275 |
| BstSFI | CTRYAG | 1 cut(s) | 690 |
| BstSLI | GKGCMC | 1 cut(s) | 257 |
| BstV1I | GCAGC | 4 cut(s) | 17, 259, 370, 520 |
| BstV2I | GAAGAC | 1 cut(s) | 531 |
| BstX2I | RGATCY | 1 cut(s) | 106 |
| BstYI | RGATCY | 1 cut(s) | 106 |
| Bsu15I | ATCGAT | 1 cut(s) | 923 |
| BsuI | GTATCC | 1 cut(s) | 274 |
| BsuRI | GGCC | 1 cut(s) | 290 |
| BsuTUI | ATCGAT | 1 cut(s) | 923 |
| BtgI | CCRYGG | 1 cut(s) | 387 |
| BtgZI | GCGATG | 1 cut(s) | 339 |
| BtsCI | GGATG | 3 cut(s) | 385, 406, 835 |
| BtsIMutI | CAGTG | 2 cut(s) | 255, 737 |
| CfoI | GCGC | 1 cut(s) | 834 |
| Cfr10I | RCCGGY | 1 cut(s) | 767 |
| Cfr13I | GGNCC | 2 cut(s) | 314, 754 |
| ClaI | ATCGAT | 1 cut(s) | 923 |
| Csp6I | GTAC | 3 cut(s) | 340, 880, 944 |
| CviAII | CATG | 4 cut(s) | 343, 388, 596, 613 |
| CviQI | GTAC | 3 cut(s) | 340, 880, 944 |
| DdeI | CTNAG | 6 cut(s) | 165, 258, 411, 529, 638, 714 |
| DpnI | GATC | 2 cut(s) | 108, 263 |
| DpnII | GATC | 2 cut(s) | 106, 261 |
| EaeI | YGGCCR | 1 cut(s) | 288 |
| Eam1104I | CTCTTC | 1 cut(s) | 462 |
| EarI | CTCTTC | 1 cut(s) | 462 |
| Eco130I | CCWWGG | 2 cut(s) | 195, 387 |
| Eco47I | GGWCC | 2 cut(s) | 314, 754 |
| Eco57I | CTGAAG | 2 cut(s) | 123, 339 |
| EcoO109I | RGGNCCY | 2 cut(s) | 314, 754 |
| EcoRII | CCWGG | 1 cut(s) | 275 |
| EcoT14I | CCWWGG | 2 cut(s) | 195, 387 |
| ErhI | CCWWGG | 2 cut(s) | 195, 387 |
| FaeI | CATG | 4 cut(s) | 346, 391, 599, 616 |
| FaqI | GGGAC | 2 cut(s) | 128, 463 |
| FatI | CATG | 4 cut(s) | 342, 387, 595, 612 |
| FauI | CCCGC | 1 cut(s) | 218 |
| Fnu4HI | GCNGC | 5 cut(s) | 6, 273, 384, 509, 846 |
| FokI | GGATG | 3 cut(s) | 392, 393, 822 |
| Fsp4HI | GCNGC | 5 cut(s) | 6, 273, 384, 509, 846 |
| FspBI | CTAG | 3 cut(s) | 21, 539, 961 |
| GlaI | GCGC | 1 cut(s) | 833 |
| GluI | GCNGC | 5 cut(s) | 6, 273, 384, 509, 846 |
| GsaI | CCCAGC | 1 cut(s) | 308 |
| GsuI | CTGGAG | 1 cut(s) | 770 |
| HaeII | RGCGCY | 1 cut(s) | 835 |
| HaeIII | GGCC | 1 cut(s) | 290 |
| HapII | CCGG | 2 cut(s) | 79, 768 |
| HhaI | GCGC | 1 cut(s) | 834 |
| Hin1II | CATG | 4 cut(s) | 346, 391, 599, 616 |
| Hin6I | GCGC | 1 cut(s) | 832 |
| HinP1I | GCGC | 1 cut(s) | 832 |
| HinfI | GANTC | 2 cut(s) | 542, 590 |
| HpaII | CCGG | 2 cut(s) | 79, 768 |
| HphI | GGTGA | 1 cut(s) | 805 |
| Hpy188I | TCNGA | 1 cut(s) | 840 |
| Hpy188III | TCNNGA | 5 cut(s) | 47, 79, 214, 410, 749 |
| HpyAV | CCTTC | 4 cut(s) | 314, 689, 693, 835 |
| HpyCH4III | ACNGT | 1 cut(s) | 16 |
| HpyCH4IV | ACGT | 2 cut(s) | 117, 878 |
| HpyCH4V | TGCA | 6 cut(s) | 26, 494, 508, 612, 668, 876 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 272 |
| HpyF3I | CTNAG | 6 cut(s) | 165, 258, 411, 529, 638, 714 |
| HpySE526I | ACGT | 2 cut(s) | 117, 878 |
| Hsp92II | CATG | 4 cut(s) | 346, 391, 599, 616 |
| HspAI | GCGC | 1 cut(s) | 832 |
| Kpn2I | TCCGGA | 1 cut(s) | 78 |
| Kzo9I | GATC | 2 cut(s) | 106, 261 |
| LguI | GCTCTTC | 1 cut(s) | 462 |
| Lsp1109I | GCAGC | 4 cut(s) | 17, 259, 370, 520 |
| LweI | GCATC | 5 cut(s) | 181, 316, 370, 915, 927 |
| MaeI | CTAG | 3 cut(s) | 21, 539, 961 |
| MaeII | ACGT | 2 cut(s) | 117, 878 |
| MaeIII | GTNAC | 1 cut(s) | 16 |
| MalI | GATC | 2 cut(s) | 108, 263 |
| MboI | GATC | 2 cut(s) | 106, 261 |
| MboII | GAAGA | 7 cut(s) | 77, 116, 164, 196, 343, 449, 536 |
| MflI | RGATCY | 1 cut(s) | 106 |
| MhlI | GDGCHC | 1 cut(s) | 257 |
| MluCI | AATT | 9 cut(s) | 34, 204, 217, 235, 437, 489, 632, 663, 669 |
| MlyI | GAGTC | 1 cut(s) | 536 |
| MmeI | TCCRAC | 1 cut(s) | 798 |
| MnlI | CCTC | 6 cut(s) | 174, 474, 514, 578, 742, 745 |
| MroI | TCCGGA | 1 cut(s) | 78 |
| MseI | TTAA | 7 cut(s) | 84, 171, 203, 245, 606, 651, 932 |
| MspI | CCGG | 2 cut(s) | 79, 768 |
| MspR9I | CCNGG | 1 cut(s) | 277 |
| Mva1269I | GAATGC | 1 cut(s) | 642 |
| MvaI | CCWGG | 1 cut(s) | 277 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 272 |
| NcoI | CCATGG | 1 cut(s) | 387 |
| NdeII | GATC | 2 cut(s) | 106, 261 |
| NlaIII | CATG | 4 cut(s) | 346, 391, 599, 616 |
| NmuCI | GTSAC | 1 cut(s) | 16 |
| NspI | RCATGY | 1 cut(s) | 346 |
| PciSI | GCTCTTC | 1 cut(s) | 462 |
| PctI | GAATGC | 1 cut(s) | 642 |
| PfeI | GAWTC | 1 cut(s) | 590 |
| PkrI | GCNGC | 5 cut(s) | 7, 274, 385, 510, 847 |
| PleI | GAGTC | 1 cut(s) | 536 |
| PpsI | GAGTC | 1 cut(s) | 536 |
| Ppu21I | YACGTR | 1 cut(s) | 879 |
| PpuMI | RGGWCCY | 2 cut(s) | 314, 754 |
| Psp5II | RGGWCCY | 2 cut(s) | 314, 754 |
| Psp6I | CCWGG | 1 cut(s) | 275 |
| PspFI | CCCAGC | 1 cut(s) | 304 |
| PspGI | CCWGG | 1 cut(s) | 275 |
| PspPI | GGNCC | 2 cut(s) | 314, 754 |
| PspPPI | RGGWCCY | 2 cut(s) | 314, 754 |
| PsuI | RGATCY | 1 cut(s) | 106 |
| RsaI | GTAC | 3 cut(s) | 341, 881, 945 |
| RsaNI | GTAC | 3 cut(s) | 340, 880, 944 |
| SapI | GCTCTTC | 1 cut(s) | 462 |
| SaqAI | TTAA | 7 cut(s) | 84, 171, 203, 245, 606, 651, 932 |
| SatI | GCNGC | 5 cut(s) | 6, 273, 384, 509, 846 |
| Sau3AI | GATC | 2 cut(s) | 106, 261 |
| Sau96I | GGNCC | 2 cut(s) | 314, 754 |
| SchI | GAGTC | 1 cut(s) | 536 |
| ScrFI | CCNGG | 1 cut(s) | 277 |
| SduI | GDGCHC | 1 cut(s) | 257 |
| SfaNI | GCATC | 5 cut(s) | 181, 316, 370, 915, 927 |
| SfcI | CTRYAG | 1 cut(s) | 690 |
| SinI | GGWCC | 2 cut(s) | 314, 754 |
| SmlI | CTYRAG | 1 cut(s) | 309 |
| SmoI | CTYRAG | 1 cut(s) | 309 |
| SpeI | ACTAGT | 1 cut(s) | 20 |
| Sse9I | AATT | 9 cut(s) | 34, 204, 217, 235, 437, 489, 632, 663, 669 |
| SsiI | CCGC | 2 cut(s) | 225, 845 |
| SspMI | CTAG | 3 cut(s) | 21, 539, 961 |
| StyD4I | CCNGG | 1 cut(s) | 275 |
| StyI | CCWWGG | 2 cut(s) | 195, 387 |
| TaaI | ACNGT | 1 cut(s) | 16 |
| TaiI | ACGT | 2 cut(s) | 120, 881 |
| TaqI | TCGA | 4 cut(s) | 441, 553, 583, 923 |
| TasI | AATT | 9 cut(s) | 34, 204, 217, 235, 437, 489, 632, 663, 669 |
| TatI | WGTACW | 1 cut(s) | 339 |
| TauI | GCSGC | 1 cut(s) | 848 |
| TfiI | GAWTC | 1 cut(s) | 590 |
| Tru1I | TTAA | 7 cut(s) | 84, 171, 203, 245, 606, 651, 932 |
| Tru9I | TTAA | 7 cut(s) | 84, 171, 203, 245, 606, 651, 932 |
| TscAI | CASTG | 2 cut(s) | 262, 744 |
| TseFI | GTSAC | 1 cut(s) | 16 |
| TseI | GCWGC | 4 cut(s) | 5, 272, 383, 508 |
| Tsp45I | GTSAC | 1 cut(s) | 16 |
| TspDTI | ATGAA | 5 cut(s) | 78, 174, 449, 612, 675 |
| TspRI | CASTG | 2 cut(s) | 262, 744 |
| VpaK11BI | GGWCC | 2 cut(s) | 314, 754 |
| XceI | RCATGY | 1 cut(s) | 346 |
| XspI | CTAG | 3 cut(s) | 21, 539, 961 |