MD03G1133900.v1.1

ankyrin repeat-containing protein

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr03
Physical Location & Seq
Forward (+)
13383924 .. 13389165
5242 bp
Loading structure...
UTR
Exon/CDS
Intron
MD03G1133900.v1.1.491

Sequence Viewer

Length: 2544 bp
ATGGCAGCTGCAGTTGTTCCTACAGTTCTTAACCGTGAGAACTATCGGAAATGGAGTTCTCGGATGAAGACCTACTTGTTGGCCGAAGATCTTTGGGACATCGTCGAAGGCACCTATCAACTTCCTGAAGAAGAAGAAGATGAAGAAGAAGATGCTGAAGCTGAACGTGAGGCTTGGAAGAAGAAGAATGTTAAGGCCTTATATGCAATCCAAAGTTCTTGTGTGGATGATATTTACGACATAATCGAGTACAAAACCAATGCCAAAGAAGCATGGGATGCTTTGTATGATTCTTTGATGCTAAGTCATACACCATACGATAAAGATGAGAGGTCACTTGTTGAAGCGTATCCAACCCGGATTGATGGAAATGATGGTGATGCTGCAATGGAAGAAGGGCTCAATGCAGGACACGATGAGATCAGCAATGCCGACGATATTAATGCAACTTTCATCAAATATGTCAAGTATAAAGATTGGGATAATGTGATCAAGTTGCTTCGCGAACATCGCCAGCTAGGAAGACTTCCAGTTTACACGGATATGGGAATTGAAGGCAAAGGTGGTACAGCTCTTCACCACGCAATCAGCCCGTTTCCGCACAGGACCGTCAACGTGCGCATTGTTGAGCAGTTGGTGGAGTTGATGGCAAAGGAAGACTTGGAAAGGCAAGACGGTTTTGGTCAGACAGCTCTTTTTCGCTTAATGCTTTATCATCCAGAAAGGGTTGAATTAGCTAAATGCATGCTTGAAAAGAACGACAAGTTAGTTACTATTTTGTGTCGTTATGAGGGCAAGACTCCTCTGGTTGTCCTGGCGGAGACGATGGAAAATGCAAAAGGAATGGCTCGCTGTCTTTACTCCGTTACACCACATGAAACACTAAGAGTTACCGATGGCGCTCAACTTCTTTCTCTCGGTTTTCAGCTCAATAGATTCGATATTGCGTGGGATTTGATTCAACGTTACCCACAATTGGCCATGGCTAAAGACTACAACGGGAATTTCCCCTTAGAAACATTGGCCAAGAACCGTCATGGATTCTTAAGTGGAAGCCGGCTCAATTTCTGGAAAAAATTAATCTATAACGCTGCTATTTGCAGCTTTGGAAAACTGGCTTTTTTTCAAAGCACATGGAGCTACAGTGCTCCTTTAATGAAAAGACCCACTATCAGACTGCTTTTTTTTCCAAAAGCACTTTTACAAAAAAGTTTACCAAACGCTCTGCTGCTTTATTTCACAGCCGCTTATTCTCACAGCACATCCGCTTATTCTCACAGCAGCTTTTTTTCAAAGCACAGCAATACCAAACCAGCCCTTCCTCCCATCAATGATAATCGTGTCAATGAAAGTGGCCAGAGTGATCAAAGGCATCTGTCAAACAAAAATGAAAATCAGAAGCCTCTCTCAGACCAAAAAGAGAATCAAAGGCATTTCAGTTGCTCAGGAATGGGTTTATTCATCGGACTCGTGAAGAATCTTCAAAAACTTTTGGGAATCAATCGTATATATGAGATGAAACTGATACATGAGCAAGTGAAGCAGTTTTTACCTATCATATCTGAAGAAAAAAGAAACTTATTCTTACCAGAACTTAAACAAGTATTGTGTGTGGCCGCAGAAAGAGGGCATGCAGAGTTTCTTACTCATTTCCTTGGAGAAGCCTTAGATATACAGGCTACAAACGACAAGCGCCAAAACGTGTTCCAAATTGCCGCTGAATGTCGTTACCACAAAGTTTATAATCTTATATATCTCCTTGATGAGTTTCTCAAAGAAGATCCAGACAAACAAAAAAAAATACAGATGATATTGGGGTCGAGAGATAACTTTGAAAATAATATATTACATACAGTAGCAAGAATTACCTCATTGTCACAGATTTATCACATTCGAGGTGCAGCTTTGCAAATGCAAAGAGAACTACAATGGTTCAAGGTGGAGAGCATTATAGATCCCAAAGATTGTGAATCTGTAAACGTGGATAATAGGACACCACGACAAGTATTTACGGATAATCACAACGACATGGGTAAAGAGGCAGAAAAGTCAATGAAGGAAACAGCAACTTCTTGTACAGTTGTAGGTGCTCTCATTGTCACCATCATGTTTGCTGCTGCAATCACAGTTCCTGGTGGAAATGATGGACATACAGGTCTTCCTACATTCTTAACCGAAAGGGTATTCACAACATTTATAGTTTCAGATGCAATCTCACTCTTTTCTTCCACAACTTCAGTTATTATGTTTCTGGGGATTCTCACATCACGTTATTCTGAAGATGATTTCCGCAAATCTTTGCCCACAAAAATGATAATAGGCCTTTTTACCCTCTTTTTATCTATCGCCACCATGATGATTGTCTTTTCTTGTGCCCTTTACATTATGCTTAAAGGGAAATCATCGATTGTTATCCCAAGCATTTTGCTTGCTAGTGTTCCAGTTACCTCATTCATATGGATGCAATTTCCATTTCTTGTTGAGTTAGTTATTTCTACGTTTGGACCAGGATTATTTGATAGGAACAAGAAAAAGTTGTTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

848

Amino Acids

96.58

Weight (kDa)

6.45

Isoelectric Point (pI)

34.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4219 PF13961 10 - 36 4.7e-10 Domain of unknown function (DUF4219)
Retrotran_gag_2 PF14223 22 - 96 2e-11 gag-polypeptide of LTR copia-type
PGG PF13962 683 - 795 6.8e-25 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000027)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G18670 AT3G18670 AT3G54065
fragaria_vesca FvH4_1g26570 FvH4_1g26570 FvH4_5g19270 FvH4_5g19273 FvH4_5g35840 FvH4_5g36340 FvH4_5g36630 FvH4_5g37181 FvH4_5g37182 FvH4_5g37185 FvH4_5g37240 FvH4_5g37260 FvH4_6g21440 FvH4_6g44571 FvH4_6g44572 FvH4_6g44610 FvH4_6g44620 FvH4_6g44650 FvH4_6g44660 FvH4_6g45151 FvH4_6g45152 FvH4_6g45152 FvH4_6g45153 FvH4_6g45153 FvH4_6g45153 FvH4_6g45153 FvH4_6g45153 FvH4_6g45154 FvH4_6g51440 FvH4_7g08090 FvH4_7g08090 FvH4_7g08090 FvH4_7g08090 FvH4_7g08090 FvH4_7g08090
malus_domestica MD00G1010300.v1.1 MD00G1010400.v1.1 MD00G1010500.v1.1 MD00G1011000.v1.1 MD00G1011200.v1.1 MD00G1011500.v1.1 MD00G1011900.v1.1 MD03G1133900.v1.1 MD03G1134100.v1.1 MD09G1086300.v1.1 MD09G1086500.v1.1 MD09G1086900.v1.1 MD09G1087000.v1.1 MD09G1088000.v1.1 MD09G1088100.v1.1 MD09G1088200.v1.1 MD09G1088300.v1.1 MD09G1089000.v1.1 MD09G1089300.v1.1 MD09G1133800.v1.1 MD16G1219400.v1.1 MD17G1027900.v1.1 MD17G1028400.v1.1 MD17G1028600.v1.1 MD17G1028700.v1.1 MD17G1028900.v1.1 MD17G1029000.v1.1 MD17G1029100.v1.1 MD17G1029200.v1.1 MD17G1075400.v1.1 MD17G1076000.v1.1 MD17G1077000.v1.1 MD17G1077100.v1.1 MD17G1077800.v1.1 MD17G1078000.v1.1 MD17G1078100.v1.1 MD17G1078300.v1.1 MD17G1100900.v1.1 MD17G1101100.v1.1 MD17G1101400.v1.1 MD17G1104200.v1.1 MD17G1104500.v1.1 MD17G1121300.v1.1 MD17G1121600.v1.1 MD17G1121900.v1.1 MD17G1122700.v1.1 MD17G1218800.v1.1
prunus_persica Prupe.2G033800_v2.0.a1 Prupe.2G033900_v2.0.a1 Prupe.2G080300_v2.0.a1 Prupe.2G080700_v2.0.a1 Prupe.2G080900_v2.0.a1 Prupe.2G081100_v2.0.a1 Prupe.2G081100_v2.0.a1 Prupe.2G081200_v2.0.a1 Prupe.2G081200_v2.0.a1 Prupe.2G081200_v2.0.a1 Prupe.2G081200_v2.0.a1 Prupe.2G081700_v2.0.a1 Prupe.2G081700_v2.0.a1 Prupe.2G082000_v2.0.a1 Prupe.2G082100_v2.0.a1 Prupe.2G082100_v2.0.a1 Prupe.2G082200_v2.0.a1 Prupe.2G082300_v2.0.a1 Prupe.2G082700_v2.0.a1 Prupe.2G082800_v2.0.a1 Prupe.2G082900_v2.0.a1 Prupe.3G235600_v2.0.a1 Prupe.3G236300_v2.0.a1 Prupe.3G236300_v2.0.a1 Prupe.3G236600_v2.0.a1 Prupe.3G236600_v2.0.a1 Prupe.3G236800_v2.0.a1 Prupe.3G237000_v2.0.a1 Prupe.3G237100_v2.0.a1 Prupe.3G237300_v2.0.a1 Prupe.3G237400_v2.0.a1 Prupe.3G237500_v2.0.a1 Prupe.3G237500_v2.0.a1 Prupe.3G237500_v2.0.a1 Prupe.4G282500_v2.0.a1 Prupe.4G282500_v2.0.a1
pyrus_communis pycom03g08990 pycom03g09000 pycom09g01180 pycom09g01190 pycom09g01220 pycom09g01230 pycom09g01360 pycom09g01370 pycom09g01380 pycom09g01410 pycom09g05500 pycom11g10280 pycom11g10290 pycom11g10310 pycom16g18270 pycom16g18280 pycom17g02280 pycom17g02290 pycom17g02300 pycom17g02360 pycom17g02390 pycom17g02410 pycom17g02440 pycom17g02460 pycom17g02470 pycom17g02480 pycom17g02510 pycom17g02530 pycom17g02540 pycom17g02550 pycom17g02560 pycom17g02570 pycom17g02580 pycom17g02630 pycom17g02640 pycom17g04970 pycom17g04980 pycom17g05010 pycom17g07090 pycom17g07620 pycom17g07630 pycom17g07640 pycom17g07650 pycom17g07660 pycom17g07740 pycom17g07760 pycom17g07770 pycom17g09580 pycom17g11170 pycom17g11200 pycom17g11220 pycom17g11240 pycom17g11250 pycom17g11300 pycom17g11340 pycom17g11380 pycom17g11440
rosa_chinensis RchiOBHm_Chr1g0332901 RchiOBHm_Chr1g0338981 RchiOBHm_Chr1g0338991 RchiOBHm_Chr1g0341201 RchiOBHm_Chr1g0341211 RchiOBHm_Chr1g0342721 RchiOBHm_Chr1g0343191 RchiOBHm_Chr2g0146761 RchiOBHm_Chr2g0161791 RchiOBHm_Chr2g0161801 RchiOBHm_Chr2g0161841 RchiOBHm_Chr2g0162041 RchiOBHm_Chr2g0162651 RchiOBHm_Chr2g0162691 RchiOBHm_Chr2g0162701 RchiOBHm_Chr2g0162711 RchiOBHm_Chr2g0162721 RchiOBHm_Chr2g0162811 RchiOBHm_Chr2g0162831 RchiOBHm_Chr2g0162841 RchiOBHm_Chr4g0416381 RchiOBHm_Chr4g0416391 RchiOBHm_Chr5g0075981 RchiOBHm_Chr6g0276101 RchiOBHm_Chr7g0214581 RchiOBHm_Chr7g0214631 RchiOBHm_Chr7g0214651 RchiOBHm_Chr7g0214721 RchiOBHm_Chr7g0223161 RchiOBHm_Chr7g0230661 RchiOBHm_Chr7g0230751 RchiOBHm_Chr7g0230781 RchiOBHm_Chr7g0234581 RchiOBHm_Chr7g0234601 RchiOBHm_Chr7g0237561 RchiOBHm_Chr7g0237571 RchiOBHm_Chr7g0238781 RchiOBHm_Chr7g0238811 RchiOBHm_Chr7g0242161 RchiOBHm_Chr7g0242401 RchiOBHm_Chr7g0242451 RchiOBHm_Chr7g0242921 RchiOBHm_Chr7g0242981 RchiOBHm_Chr7g0243111 RchiOBHm_Chr7g0243251 RchiOBHm_Chr7g0243331
rosa_laevigata RLG00000000803 RLG00000000807 RLG00000000809 RLG00000000811 RLG00000000814 RLG00000000854 RLG00000000859 RLG00000000864 RLG00000000994 RLG00000000995 RLG00000001458 RLG00000001461 RLG00000001474 RLG00000001476 RLG00000002729 RLG00000002730 RLG00000003505 RLG00000008871 RLG00000008873 RLG00000018513 RLG00000021300 RLG00000021303 RLG00000021318 RLG00000021356 RLG00000021357 RLG00000029070 RLG00000029071 RLG00000029171 RLG00000029189 RLG00000029190 RLG00000029640 RLG00000034635
rosa_multiflora Rmu_co8149086.1_g000001 Rmu_co8460577.1_g000001 Rmu_sc0000429.1_g000062 Rmu_sc0000429.1_g000071 Rmu_sc0000429.1_g000081 Rmu_sc0000863.1_g000020 Rmu_sc0001488.1_g000011 Rmu_sc0001545.1_g000007 Rmu_sc0001849.1_g000068 Rmu_sc0001993.1_g000003 Rmu_sc0002222.1_g000002 Rmu_sc0002308.1_g000053 Rmu_sc0002308.1_g000069 Rmu_sc0002480.1_g000007 Rmu_sc0003179.1_g000041 Rmu_sc0004213.1_g000011 Rmu_sc0007101.1_g000012 Rmu_sc0008565.1_g000011 Rmu_sc0009298.1_g000003 Rmu_sc0010407.1_g000009 Rmu_sc0010407.1_g000013 Rmu_sc0026966.1_g000004 Rmu_ssc0000152.1_g000012 Rmu_ssc0000152.1_g000014 Rmu_ssc0000295.1_g000021 Rmu_ssc0000295.1_g000026
rosa_roxburghii Rroxscaffold_1G00029600 Rroxscaffold_2G00087790 Rroxscaffold_2G00087800 Rroxscaffold_2G00088360 Rroxscaffold_2G00088500 Rroxscaffold_2G00088530 Rroxscaffold_2G00088590 Rroxscaffold_3G00221570 Rroxscaffold_3G00222190 Rroxscaffold_3G00222240 Rroxscaffold_3G00222880 Rroxscaffold_3G00222900 Rroxscaffold_3G00223990 Rroxscaffold_3G00229750 Rroxscaffold_3G00229760 Rroxscaffold_3G00245140 Rroxscaffold_3G00245150 Rroxscaffold_3G00245200 Rroxscaffold_3G00253520 Rroxscaffold_3G00253530 Rroxscaffold_4G00294500 Rroxscaffold_4G00311800 Rroxscaffold_4G00311830 Rroxscaffold_4G00311850 Rroxscaffold_4G00313180 Rroxscaffold_4G00313210 Rroxscaffold_4G00316270 Rroxscaffold_4G00317910 Rroxscaffold_4G00317920 Rroxscaffold_5G00349290 Rroxscaffold_5G00349300 Rroxscaffold_5G00349310 Rroxscaffold_5G00351950 Rroxscaffold_5G00351960 Rroxscaffold_5G00353390 Rroxscaffold_7G00192540
rosa_rugosa Rorug01G0102500 Rorug01G0102600 Rorug01G0146400.1 Rorug01G0146500.1 Rorug01G0159400.1 Rorug01G0159500.1 Rorug02G0491900 Rorug02G0492000 Rorug02G0492100 Rorug02G0492200 Rorug02G0492300 Rorug02G0492400 Rorug02G0492500 Rorug02G0492700 Rorug02G0498500 Rorug02G0498600 Rorug02G0498800 Rorug04G0006900 Rorug04G0053700 Rorug06G0002000 Rorug06G0002100 Rorug07G0304700 Rorug07G0304800 Rorug07G0304800 Rorug07G0304800 Rorug07G0305300 Rorug07G0305400 Rorug07G0305500 Rorug07G0305500 Rorug07G0318300 Rorug07G0318600 Rorug07G0323600
rosa_samantha Rh1AG128900 Rh1AG162500 Rh1AG163000 Rh1AG164000 Rh1AG164700 Rh1AG173200 Rh1AG173300 Rh1AG173800 Rh1BG098100 Rh1BG129800 Rh1BG130600 Rh1BG141300 Rh1BG141500 Rh1BG141600 Rh1CG122700 Rh1CG151900 Rh1CG152400 Rh1CG153100 Rh1CG153500 Rh1CG161400 Rh1CG161600 Rh1DG134200 Rh1DG173500 Rh1DG173700 Rh2AG558100 Rh2AG558500 Rh2AG560200 Rh2AG564700 Rh2AG564800 Rh2BG465600 Rh2BG571700 Rh2BG572000 Rh2BG573500 Rh2CG439800 Rh2CG541800 Rh2CG542100 Rh2CG542200 Rh2CG543800 Rh2CG547300 Rh2DG474700 Rh2DG580600 Rh2DG580900 Rh2DG581200 Rh2DG581700 Rh2DG581800 Rh2DG583500 Rh2DG587200 Rh2DG587300 Rh2DG587400 Rh4AG128900 Rh4AG203800 Rh4AG319900 Rh4AG320000 Rh4BG122200 Rh4BG201100 Rh4CG136000 Rh4DG122400 Rh4DG201100 Rh4DG323600 Rh6BG077000 Rh6DG206200 Rh7AG282300 Rh7AG282500 Rh7AG283400 Rh7AG358600 Rh7AG414500 Rh7AG415200 Rh7AG415500 Rh7AG461700 Rh7AG469300 Rh7AG477800 Rh7BG273900 Rh7BG274000 Rh7BG390400 Rh7BG390500 Rh7BG391500 Rh7BG391800 Rh7BG408300 Rh7BG432000 Rh7BG439200 Rh7BG449200 Rh7BG449900 Rh7BG450400 Rh7BG450500 Rh7CG220900 Rh7CG301600 Rh7CG302700 Rh7CG377000 Rh7CG433900 Rh7CG434200 Rh7CG478800 Rh7DG286200 Rh7DG354000 Rh7DG424600 Rh7DG448000 Rh7DG462800 Rh7DG462900
rosa_wichuraiana Rw0G003440 Rw0G011970 Rw0G017120 Rw0G017130 Rw0G017140 Rw0G018470 Rw0G018480 Rw0G020440 Rw1G010470 Rw2G046180 Rw2G046210 Rw2G046230 Rw2G046390 Rw2G046400 Rw2G046710 Rw2G046720 Rw2G046730 Rw3G025310 Rw4G010410 Rw4G017250 Rw6G018270 Rw7G018180 Rw7G024130 Rw7G024160 Rw7G024170 Rw7G034060 Rw7G034250 Rw7G034260 Rw7G034400 Rw7G034410 Rw7G038210 Rw7G039020 Rw7G039060 Rw7G039280 Rw7G039400 Rw7G039470 Rw7G039880 Rw7G039890

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1743
AasI GACNNNNNNGTC 1 cut(s) 2154
Acc16I TGCGCA 1 cut(s) 620
AccB1I GGYRCC 1 cut(s) 110
AccII CGCG 1 cut(s) 504
AciI CCGC 7 cut(s) 599, 818, 1245, 1266, 1617, 1716, 2290
AclI AACGTT 1 cut(s) 964
AclWI GGATC 2 cut(s) 1775, 1949
AcoI YGGCCR 5 cut(s) 81, 978, 1023, 1354, 1614
AcsI RAATTY 1 cut(s) 1003
AcuI CTGAAG 5 cut(s) 147, 177, 1584, 2220, 2298
AfaI GTAC 3 cut(s) 251, 568, 2077
AfiI CCNNNNNNNGG 1 cut(s) 976
AflII CTTAAG 1 cut(s) 1045
AflIII ACRYGT 1 cut(s) 1701
AjnI CCWGG 3 cut(s) 813, 2131, 2506
AloI GAACNNNNNNTCC 2 cut(s) 40, 72
Alw21I GWGCWC 2 cut(s) 1150, 2092
Alw26I GTCTC 1 cut(s) 815
AlwI GGATC 2 cut(s) 1775, 1949
AlwNI CAGNNNCTG 1 cut(s) 2132
AoxI GGCC 7 cut(s) 81, 195, 978, 1023, 1354, 1614, 2320
ApoI RAATTY 1 cut(s) 1003
AseI ATTAAT 2 cut(s) 441, 1079
AspLEI GCGC 3 cut(s) 621, 902, 1695
AspS9I GGNCC 2 cut(s) 606, 2504
AsuC2I CCSGG 1 cut(s) 358
AsuHPI GGTGA 3 cut(s) 389, 569, 2092
AvaII GGWCC 2 cut(s) 606, 2504
BaeGI GKGCMC 1 cut(s) 2377
BalI TGGCCA 3 cut(s) 980, 1025, 1356
BanI GGYRCC 1 cut(s) 110
BanII GRGCYC 1 cut(s) 402
BauI CACGAG 1 cut(s) 1469
BbsI GAAGAC 4 cut(s) 74, 529, 663, 2150
Bbv12I GWGCWC 2 cut(s) 1150, 2092
BbvI GCAGC 9 cut(s) 17, 370, 1078, 1113, 1215, 1293, 1913, 2101, 2104
BccI CCATC 8 cut(s) 359, 368, 640, 820, 890, 1334, 2111, 2138
BcgI CGANNNNNNTGC 2 cut(s) 425, 459
BciT130I CCWGG 3 cut(s) 815, 2133, 2508
BciVI GTATCC 1 cut(s) 360
BclI TGATCA 2 cut(s) 489, 1363
BcnI CCSGG 1 cut(s) 358
BcoDI GTCTC 1 cut(s) 815
BfaI CTAG 2 cut(s) 518, 2433
BfmI CTRYAG 3 cut(s) 9, 21, 1141
BfoI RGCGCY 2 cut(s) 903, 1696
BfrI CTTAAG 1 cut(s) 1045
BfuI GTATCC 1 cut(s) 360
BglII AGATCT 1 cut(s) 88
Bme1390I CCNGG 4 cut(s) 358, 815, 2133, 2508
Bme18I GGWCC 2 cut(s) 606, 2504
BmgT120I GGNCC 2 cut(s) 606, 2504
BmiI GGNNCC 1 cut(s) 112
BmrFI CCNGG 4 cut(s) 358, 815, 2133, 2508
BmsI GCATC 7 cut(s) 142, 268, 288, 370, 1381, 2197, 2451
BpiI GAAGAC 4 cut(s) 74, 529, 663, 2150
Bpu10I CCTNAGC 1 cut(s) 1444
BpuMI CCSGG 1 cut(s) 358
Bsa29I ATCGAT 1 cut(s) 2405
BsaBI GATNNNNATC 1 cut(s) 2411
BsaJI CCNNGG 2 cut(s) 981, 1654
BsaXI ACNNNNNCTCC 2 cut(s) 1129, 1159
Bsc4I CCNNNNNNNGG 1 cut(s) 976
Bse118I RCCGGY 1 cut(s) 1056
Bse1I ACTGG 3 cut(s) 530, 1119, 2441
Bse3DI GCAATG 2 cut(s) 393, 433
Bse8I GATNNNNATC 1 cut(s) 2411
BseBI CCWGG 3 cut(s) 815, 2133, 2508
BseCI ATCGAT 1 cut(s) 2405
BseDI CCNNGG 2 cut(s) 981, 1654
BseGI GGATG 6 cut(s) 69, 232, 283, 715, 1262, 2466
BseJI GATNNNNATC 1 cut(s) 2411
BseLI CCNNNNNNNGG 1 cut(s) 976
BseMI GCAATG 2 cut(s) 393, 433
BseMII CTCAG 2 cut(s) 1422, 1458
BseNI ACTGG 3 cut(s) 530, 1119, 2441
BseRI GAGGAG 1 cut(s) 792
BseSI GKGCMC 1 cut(s) 2377
BseXI GCAGC 9 cut(s) 17, 370, 1078, 1113, 1215, 1293, 1913, 2101, 2104
BsgI GTGCAG 1 cut(s) 1920
Bsh1236I CGCG 1 cut(s) 504
BshFI GGCC 7 cut(s) 83, 197, 980, 1025, 1356, 1616, 2322
BshNI GGYRCC 1 cut(s) 110
BshVI ATCGAT 1 cut(s) 2405
BsiHKAI GWGCWC 2 cut(s) 1150, 2092
BsiSI CCGG 2 cut(s) 358, 1057
BslFI GGGAC 1 cut(s) 110
BslI CCNNNNNNNGG 1 cut(s) 976
BsmAI GTCTC 1 cut(s) 815
BsmBI CGTCTC 1 cut(s) 815
BsmFI GGGAC 1 cut(s) 110
BsnI GGCC 7 cut(s) 83, 197, 980, 1025, 1356, 1616, 2322
Bsp1286I GDGCHC 4 cut(s) 402, 1150, 2092, 2377
Bsp1407I TGTACA 1 cut(s) 2075
Bsp143I GATC 6 cut(s) 88, 420, 489, 1363, 1780, 1954
Bsp19I CCATGG 1 cut(s) 981
Bsp68I TCGCGA 1 cut(s) 504
BspACI CCGC 7 cut(s) 599, 818, 1245, 1266, 1617, 1716, 2290
BspANI GGCC 7 cut(s) 83, 197, 980, 1025, 1356, 1616, 2322
BspCNI CTCAG 2 cut(s) 1421, 1457
BspDI ATCGAT 1 cut(s) 2405
BspFNI CGCG 1 cut(s) 504
BspLI GGNNCC 1 cut(s) 112
BspMAI CTGCAG 1 cut(s) 13
BspPI GGATC 2 cut(s) 1775, 1949
BspQI GCTCTTC 1 cut(s) 579
BspT107I GGYRCC 1 cut(s) 110
BspTI CTTAAG 1 cut(s) 1045
BsrDI GCAATG 2 cut(s) 393, 433
BsrFI RCCGGY 1 cut(s) 1056
BsrGI TGTACA 1 cut(s) 2075
BsrI ACTGG 3 cut(s) 530, 1119, 2441
BssAI RCCGGY 1 cut(s) 1056
BssECI CCNNGG 2 cut(s) 981, 1654
BssMI GATC 6 cut(s) 88, 420, 489, 1363, 1780, 1954
BssSI CACGAG 1 cut(s) 1469
BssT1I CCWWGG 2 cut(s) 981, 1654
Bst2BI CACGAG 1 cut(s) 1469
Bst2UI CCWGG 3 cut(s) 815, 2133, 2508
Bst4CI ACNGT 9 cut(s) 25, 35, 610, 677, 1034, 1145, 1855, 2080, 2128
Bst6I CTCTTC 1 cut(s) 579
BstAFI CTTAAG 1 cut(s) 1045
BstAPI GCANNNNNTGC 1 cut(s) 278
BstAUI TGTACA 1 cut(s) 2075
BstC8I GCNNGC 6 cut(s) 515, 746, 850, 1058, 1632, 2430
BstDEI CTNAG 6 cut(s) 302, 884, 1012, 1408, 1444, 1666
BstDSI CCRYGG 1 cut(s) 981
BstF5I GGATG 6 cut(s) 69, 232, 283, 715, 1262, 2466
BstFNI CGCG 1 cut(s) 504
BstH2I RGCGCY 2 cut(s) 903, 1696
BstHHI GCGC 3 cut(s) 621, 902, 1695
BstKTI GATC 6 cut(s) 91, 423, 492, 1366, 1783, 1957
BstMAI GTCTC 1 cut(s) 815
BstMBI GATC 6 cut(s) 88, 420, 489, 1363, 1780, 1954
BstMWI GCNNNNNNNGC 6 cut(s) 203, 269, 278, 510, 1137, 1540
BstNI CCWGG 3 cut(s) 815, 2133, 2508
BstNSI RCATGY 2 cut(s) 748, 1634
BstSCI CCNGG 4 cut(s) 356, 813, 2131, 2506
BstSFI CTRYAG 3 cut(s) 9, 21, 1141
BstSLI GKGCMC 1 cut(s) 2377
BstUI CGCG 1 cut(s) 504
BstV1I GCAGC 9 cut(s) 17, 370, 1078, 1113, 1215, 1293, 1913, 2101, 2104
BstV2I GAAGAC 4 cut(s) 74, 529, 663, 2150
BstX2I RGATCY 3 cut(s) 88, 1780, 1954
BstYI RGATCY 3 cut(s) 88, 1780, 1954
Bsu15I ATCGAT 1 cut(s) 2405
BsuI GTATCC 1 cut(s) 360
BsuRI GGCC 7 cut(s) 83, 197, 980, 1025, 1356, 1616, 2322
BsuTUI ATCGAT 1 cut(s) 2405
BtgI CCRYGG 1 cut(s) 981
BtgZI GCGATG 1 cut(s) 494
BtsCI GGATG 6 cut(s) 69, 232, 283, 715, 1262, 2466
BtsIMutI CAGTG 1 cut(s) 1150
BtuMI TCGCGA 1 cut(s) 504
Cac8I GCNNGC 6 cut(s) 515, 746, 850, 1058, 1632, 2430
CaiI CAGNNNCTG 1 cut(s) 2132
CfoI GCGC 3 cut(s) 621, 902, 1695
Cfr10I RCCGGY 1 cut(s) 1056
Cfr13I GGNCC 2 cut(s) 606, 2504
ClaI ATCGAT 1 cut(s) 2405
Csp6I GTAC 3 cut(s) 250, 567, 2076
CspCI CAANNNNNGTGG 2 cut(s) 1333, 1368
CviQI GTAC 3 cut(s) 250, 567, 2076
DdeI CTNAG 6 cut(s) 302, 884, 1012, 1408, 1444, 1666
DpnI GATC 6 cut(s) 90, 422, 491, 1365, 1782, 1956
DpnII GATC 6 cut(s) 88, 420, 489, 1363, 1780, 1954
DrdI GACNNNNNNGTC 1 cut(s) 2154
DseDI GACNNNNNNGTC 1 cut(s) 2154
EaeI YGGCCR 5 cut(s) 81, 978, 1023, 1354, 1614
Eam1104I CTCTTC 1 cut(s) 579
EarI CTCTTC 1 cut(s) 579
EciI GGCGGA 1 cut(s) 833
Eco130I CCWWGG 2 cut(s) 981, 1654
Eco147I AGGCCT 2 cut(s) 197, 2322
Eco24I GRGCYC 1 cut(s) 402
Eco47I GGWCC 2 cut(s) 606, 2504
Eco57I CTGAAG 5 cut(s) 147, 177, 1584, 2220, 2298
EcoRII CCWGG 3 cut(s) 813, 2131, 2506
EcoT14I CCWWGG 2 cut(s) 981, 1654
EcoT22I ATGCAT 1 cut(s) 746
EcoT38I GRGCYC 1 cut(s) 402
ErhI CCWWGG 2 cut(s) 981, 1654
Esp3I CGTCTC 1 cut(s) 815
FalI AAGNNNNNCTT 4 cut(s) 59, 91, 644, 676
FaqI GGGAC 1 cut(s) 110
FauNDI CATATG 1 cut(s) 2456
FbaI TGATCA 2 cut(s) 489, 1363
FokI GGATG 6 cut(s) 76, 239, 290, 702, 1249, 2473
FriOI GRGCYC 1 cut(s) 402
FspAI RTGCGCAY 1 cut(s) 620
FspBI CTAG 2 cut(s) 518, 2433
FspI TGCGCA 1 cut(s) 620
GlaI GCGC 3 cut(s) 620, 901, 1694
HaeII RGCGCY 2 cut(s) 903, 1696
HaeIII GGCC 7 cut(s) 83, 197, 980, 1025, 1356, 1616, 2322
HapII CCGG 2 cut(s) 358, 1057
HhaI GCGC 3 cut(s) 621, 902, 1695
Hin6I GCGC 3 cut(s) 619, 900, 1693
HinP1I GCGC 3 cut(s) 619, 900, 1693
HincII GTYRAC 1 cut(s) 613
HindII GTYRAC 1 cut(s) 613
HpaII CCGG 2 cut(s) 358, 1057
HphI GGTGA 3 cut(s) 389, 569, 2092
Hpy166II GTNNAC 4 cut(s) 535, 613, 1214, 1978
Hpy188III TCNNGA 8 cut(s) 125, 503, 719, 1069, 1446, 1471, 1784, 1821
Hpy8I GTNNAC 4 cut(s) 535, 613, 1214, 1978
Hpy99I CGWCG 2 cut(s) 107, 437
HpyAV CCTTC 5 cut(s) 101, 389, 548, 1328, 2050
HpyCH4III ACNGT 9 cut(s) 25, 35, 610, 677, 1034, 1145, 1855, 2080, 2128
HpyCH4IV ACGT 7 cut(s) 166, 615, 964, 1701, 1980, 2269, 2498
HpyF10VI GCNNNNNNNGC 6 cut(s) 203, 269, 278, 510, 1137, 1540
HpyF3I CTNAG 6 cut(s) 302, 884, 1012, 1408, 1444, 1666
HpySE526I ACGT 7 cut(s) 166, 615, 964, 1701, 1980, 2269, 2498
HspAI GCGC 3 cut(s) 619, 900, 1693
KroI GCCGGC 1 cut(s) 1056
KroNI GCCGGC 1 cut(s) 1058
Ksp22I TGATCA 2 cut(s) 489, 1363
Kzo9I GATC 6 cut(s) 88, 420, 489, 1363, 1780, 1954
LguI GCTCTTC 1 cut(s) 579
LmnI GCTCC 2 cut(s) 1137, 1153
Lsp1109I GCAGC 9 cut(s) 17, 370, 1078, 1113, 1215, 1293, 1913, 2101, 2104
LweI GCATC 7 cut(s) 142, 268, 288, 370, 1381, 2197, 2451
MaeI CTAG 2 cut(s) 518, 2433
MaeII ACGT 7 cut(s) 166, 615, 964, 1701, 1980, 2269, 2498
MaeIII GTNAC 9 cut(s) 333, 769, 865, 889, 965, 1727, 1875, 2098, 2443
MalI GATC 6 cut(s) 90, 422, 491, 1365, 1782, 1956
MboI GATC 6 cut(s) 88, 420, 489, 1363, 1780, 1954
MfeI CAATTG 1 cut(s) 974
MflI RGATCY 3 cut(s) 88, 1780, 1954
MhlI GDGCHC 4 cut(s) 402, 1150, 2092, 2377
MlsI TGGCCA 3 cut(s) 980, 1025, 1356
MluCI AATT 9 cut(s) 549, 731, 974, 1003, 1063, 1076, 1710, 1863, 2465
MluNI TGGCCA 3 cut(s) 980, 1025, 1356
MlyI GAGTC 2 cut(s) 793, 1461
MmeI TCCRAC 1 cut(s) 377
Mox20I TGGCCA 3 cut(s) 980, 1025, 1356
Mph1103I ATGCAT 1 cut(s) 746
MroNI GCCGGC 1 cut(s) 1056
MscI TGGCCA 3 cut(s) 980, 1025, 1356
MslI CAYNNNNRTG 6 cut(s) 542, 2105, 2309, 2354, 2455, 2459
Msp20I TGGCCA 3 cut(s) 980, 1025, 1356
MspA1I CMGCKG 2 cut(s) 8, 1718
MspCI CTTAAG 1 cut(s) 1045
MspI CCGG 2 cut(s) 358, 1057
MspR9I CCNGG 4 cut(s) 358, 815, 2133, 2508
MunI CAATTG 1 cut(s) 974
MvaI CCWGG 3 cut(s) 815, 2133, 2508
MvnI CGCG 1 cut(s) 504
MwoI GCNNNNNNNGC 6 cut(s) 203, 269, 278, 510, 1137, 1540
NaeI GCCGGC 1 cut(s) 1058
NciI CCSGG 1 cut(s) 358
NcoI CCATGG 1 cut(s) 981
NdeI CATATG 1 cut(s) 2456
NdeII GATC 6 cut(s) 88, 420, 489, 1363, 1780, 1954
NgoMIV GCCGGC 1 cut(s) 1056
NlaIV GGNNCC 1 cut(s) 112
NmuCI GTSAC 3 cut(s) 333, 1875, 2098
NruI TCGCGA 1 cut(s) 504
NsbI TGCGCA 1 cut(s) 620
NsiI ATGCAT 1 cut(s) 746
NspI RCATGY 2 cut(s) 748, 1634
PaeI GCATGC 2 cut(s) 748, 1634
PceI AGGCCT 2 cut(s) 197, 2322
PciSI GCTCTTC 1 cut(s) 579
PcsI WCGNNNNNNNCGW 1 cut(s) 243
PdiI GCCGGC 1 cut(s) 1058
PfeI GAWTC 9 cut(s) 290, 936, 958, 1041, 1423, 1477, 1497, 1970, 2257
PflFI GACNNNGTC 1 cut(s) 101
PleI GAGTC 2 cut(s) 793, 1461
PpsI GAGTC 2 cut(s) 793, 1461
PshBI ATTAAT 2 cut(s) 441, 1079
PsiI TTATAA 1 cut(s) 1743
Psp1406I AACGTT 1 cut(s) 964
Psp6I CCWGG 3 cut(s) 813, 2131, 2506
PspGI CCWGG 3 cut(s) 813, 2131, 2506
PspN4I GGNNCC 1 cut(s) 112
PspPI GGNCC 2 cut(s) 606, 2504
PstI CTGCAG 1 cut(s) 13
PstNI CAGNNNCTG 1 cut(s) 2132
PsuI RGATCY 3 cut(s) 88, 1780, 1954
PsyI GACNNNGTC 1 cut(s) 101
PvuII CAGCTG 1 cut(s) 8
RruI TCGCGA 1 cut(s) 504
RsaI GTAC 3 cut(s) 251, 568, 2077
RsaNI GTAC 3 cut(s) 250, 567, 2076
RseI CAYNNNNRTG 6 cut(s) 542, 2105, 2309, 2354, 2455, 2459
SapI GCTCTTC 1 cut(s) 579
Sau3AI GATC 6 cut(s) 88, 420, 489, 1363, 1780, 1954
Sau96I GGNCC 2 cut(s) 606, 2504
SchI GAGTC 2 cut(s) 793, 1461
ScrFI CCNGG 4 cut(s) 358, 815, 2133, 2508
SduI GDGCHC 4 cut(s) 402, 1150, 2092, 2377
SfaNI GCATC 7 cut(s) 142, 268, 288, 370, 1381, 2197, 2451
SfcI CTRYAG 3 cut(s) 9, 21, 1141
SinI GGWCC 2 cut(s) 606, 2504
SmiMI CAYNNNNRTG 6 cut(s) 542, 2105, 2309, 2354, 2455, 2459
SmlI CTYRAG 1 cut(s) 1045
SmoI CTYRAG 1 cut(s) 1045
SphI GCATGC 2 cut(s) 748, 1634
Sse9I AATT 9 cut(s) 549, 731, 974, 1003, 1063, 1076, 1710, 1863, 2465
SseBI AGGCCT 2 cut(s) 197, 2322
SsiI CCGC 7 cut(s) 599, 818, 1245, 1266, 1617, 1716, 2290
SspMI CTAG 2 cut(s) 518, 2433
StuI AGGCCT 2 cut(s) 197, 2322
StyD4I CCNGG 4 cut(s) 356, 813, 2131, 2506
StyI CCWWGG 2 cut(s) 981, 1654
TaaI ACNGT 9 cut(s) 25, 35, 610, 677, 1034, 1145, 1855, 2080, 2128
TaiI ACGT 7 cut(s) 169, 618, 967, 1704, 1983, 2272, 2501
TaqI TCGA 6 cut(s) 105, 246, 939, 1820, 1894, 2405
TasI AATT 9 cut(s) 549, 731, 974, 1003, 1063, 1076, 1710, 1863, 2465
TatI WGTACW 2 cut(s) 249, 2075
TauI GCSGC 3 cut(s) 1247, 1619, 1718
TfiI GAWTC 9 cut(s) 290, 936, 958, 1041, 1423, 1477, 1497, 1970, 2257
TscAI CASTG 1 cut(s) 1150
TseFI GTSAC 3 cut(s) 333, 1875, 2098
Tsp45I GTSAC 3 cut(s) 333, 1875, 2098
TspGWI ACGGA 3 cut(s) 554, 853, 2027
TspRI CASTG 1 cut(s) 1150
Tth111I GACNNNGTC 1 cut(s) 101
Vha464I CTTAAG 1 cut(s) 1045
VpaK11BI GGWCC 2 cut(s) 606, 2504
VspI ATTAAT 2 cut(s) 441, 1079
XapI RAATTY 1 cut(s) 1003
XceI RCATGY 2 cut(s) 748, 1634
XspI CTAG 2 cut(s) 518, 2433
Zsp2I ATGCAT 1 cut(s) 746
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.