protein ubiquitination
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 3 cut(s) | 269, 392, 834 |
| AccI | GTMKAC | 1 cut(s) | 147 |
| AciI | CCGC | 1 cut(s) | 1131 |
| AclI | AACGTT | 1 cut(s) | 673 |
| AclWI | GGATC | 1 cut(s) | 223 |
| AcoI | YGGCCR | 2 cut(s) | 585, 1135 |
| AcsI | RAATTY | 2 cut(s) | 136, 658 |
| AcuI | CTGAAG | 1 cut(s) | 162 |
| AfaI | GTAC | 1 cut(s) | 564 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 21, 246, 716 |
| AjiI | CACGTC | 2 cut(s) | 232, 361 |
| AjnI | CCWGG | 3 cut(s) | 17, 34, 351 |
| AluBI | AGCT | 6 cut(s) | 254, 332, 714, 808, 973, 1013 |
| AluI | AGCT | 6 cut(s) | 254, 332, 714, 808, 973, 1013 |
| Alw21I | GWGCWC | 1 cut(s) | 1036 |
| Alw26I | GTCTC | 1 cut(s) | 200 |
| Alw44I | GTGCAC | 1 cut(s) | 1032 |
| AlwI | GGATC | 1 cut(s) | 223 |
| AoxI | GGCC | 6 cut(s) | 237, 307, 322, 585, 1135, 1141 |
| ApaLI | GTGCAC | 1 cut(s) | 1032 |
| ApeKI | GCWGC | 4 cut(s) | 382, 943, 1010, 1056 |
| ApoI | RAATTY | 2 cut(s) | 136, 658 |
| AseI | ATTAAT | 1 cut(s) | 90 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1085 |
| AspLEI | GCGC | 1 cut(s) | 641 |
| AspS9I | GGNCC | 2 cut(s) | 237, 1142 |
| AsuC2I | CCSGG | 3 cut(s) | 241, 1025, 1042 |
| AsuHPI | GGTGA | 2 cut(s) | 182, 752 |
| AsuII | TTCGAA | 1 cut(s) | 554 |
| AsuNHI | GCTAGC | 1 cut(s) | 800 |
| AxyI | CCTNAGG | 1 cut(s) | 873 |
| BaeGI | GKGCMC | 1 cut(s) | 1036 |
| BalI | TGGCCA | 1 cut(s) | 1137 |
| Bbv12I | GWGCWC | 1 cut(s) | 1036 |
| BbvI | GCAGC | 4 cut(s) | 369, 930, 1022, 1068 |
| BccI | CCATC | 6 cut(s) | 161, 629, 819, 873, 949, 1004 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 155, 189 |
| BciT130I | CCWGG | 3 cut(s) | 19, 36, 353 |
| BciVI | GTATCC | 2 cut(s) | 18, 451 |
| BcnI | CCSGG | 3 cut(s) | 241, 1025, 1042 |
| BcoDI | GTCTC | 1 cut(s) | 200 |
| BfaI | CTAG | 3 cut(s) | 416, 726, 801 |
| BfoI | RGCGCY | 1 cut(s) | 642 |
| BfuI | GTATCC | 2 cut(s) | 18, 451 |
| BisI | GCNGC | 4 cut(s) | 383, 944, 1011, 1057 |
| BlsI | GCNGC | 4 cut(s) | 384, 945, 1012, 1058 |
| Bme1390I | CCNGG | 6 cut(s) | 19, 36, 241, 353, 1025, 1042 |
| BmgBI | CACGTC | 2 cut(s) | 232, 361 |
| BmgT120I | GGNCC | 2 cut(s) | 237, 1142 |
| BmiI | GGNNCC | 1 cut(s) | 238 |
| BmrFI | CCNGG | 6 cut(s) | 19, 36, 241, 353, 1025, 1042 |
| BmrI | ACTGGG | 2 cut(s) | 38, 839 |
| BmsI | GCATC | 2 cut(s) | 163, 412 |
| BmtI | GCTAGC | 1 cut(s) | 804 |
| BmuI | ACTGGG | 2 cut(s) | 38, 839 |
| BpmI | CTGGAG | 2 cut(s) | 40, 99 |
| Bpu14I | TTCGAA | 1 cut(s) | 554 |
| BpuEI | CTTGAG | 1 cut(s) | 932 |
| BpuMI | CCSGG | 3 cut(s) | 241, 1025, 1042 |
| BsaI | GGTCTC | 1 cut(s) | 200 |
| BsaJI | CCNNGG | 2 cut(s) | 34, 1138 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 21, 246, 716 |
| Bse1I | ACTGG | 2 cut(s) | 44, 845 |
| Bse21I | CCTNAGG | 1 cut(s) | 873 |
| Bse3DI | GCAATG | 1 cut(s) | 720 |
| BseBI | CCWGG | 3 cut(s) | 19, 36, 353 |
| BseDI | CCNNGG | 2 cut(s) | 34, 1138 |
| BseGI | GGATG | 6 cut(s) | 208, 277, 348, 427, 640, 868 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 21, 246, 716 |
| BseMI | GCAATG | 1 cut(s) | 720 |
| BseMII | CTCAG | 3 cut(s) | 668, 887, 1005 |
| BseNI | ACTGG | 2 cut(s) | 44, 845 |
| BseRI | GAGGAG | 1 cut(s) | 851 |
| BseSI | GKGCMC | 1 cut(s) | 1036 |
| BseXI | GCAGC | 4 cut(s) | 369, 930, 1022, 1068 |
| BsgI | GTGCAG | 1 cut(s) | 1029 |
| Bsh1285I | CGRYCG | 1 cut(s) | 615 |
| BshFI | GGCC | 6 cut(s) | 239, 309, 324, 587, 1137, 1143 |
| BsiEI | CGRYCG | 1 cut(s) | 615 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1036 |
| BsiSI | CCGG | 3 cut(s) | 240, 1024, 1041 |
| BslFI | GGGAC | 1 cut(s) | 412 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 21, 246, 716 |
| BsmAI | GTCTC | 1 cut(s) | 200 |
| BsmFI | GGGAC | 1 cut(s) | 412 |
| BsmI | GAATGC | 2 cut(s) | 562, 802 |
| BsnI | GGCC | 6 cut(s) | 239, 309, 324, 587, 1137, 1143 |
| Bso31I | GGTCTC | 1 cut(s) | 200 |
| Bsp119I | TTCGAA | 1 cut(s) | 554 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1036 |
| Bsp143I | GATC | 1 cut(s) | 215 |
| Bsp19I | CCATGG | 1 cut(s) | 1138 |
| BspACI | CCGC | 1 cut(s) | 1131 |
| BspANI | GGCC | 6 cut(s) | 239, 309, 324, 587, 1137, 1143 |
| BspCNI | CTCAG | 3 cut(s) | 667, 886, 1006 |
| BspHI | TCATGA | 1 cut(s) | 1077 |
| BspLI | GGNNCC | 1 cut(s) | 238 |
| BspOI | GCTAGC | 1 cut(s) | 804 |
| BspPI | GGATC | 1 cut(s) | 223 |
| BspQI | GCTCTTC | 1 cut(s) | 432 |
| BspT104I | TTCGAA | 1 cut(s) | 554 |
| BspTNI | GGTCTC | 1 cut(s) | 200 |
| BsrDI | GCAATG | 1 cut(s) | 720 |
| BsrI | ACTGG | 2 cut(s) | 44, 845 |
| BssECI | CCNNGG | 2 cut(s) | 34, 1138 |
| BssMI | GATC | 1 cut(s) | 215 |
| BssT1I | CCWWGG | 1 cut(s) | 1138 |
| Bst2UI | CCWGG | 3 cut(s) | 19, 36, 353 |
| Bst4CI | ACNGT | 4 cut(s) | 57, 368, 902, 1086 |
| Bst6I | CTCTTC | 1 cut(s) | 432 |
| BstBI | TTCGAA | 1 cut(s) | 554 |
| BstC8I | GCNNGC | 3 cut(s) | 774, 802, 806 |
| BstDEI | CTNAG | 4 cut(s) | 335, 654, 873, 1014 |
| BstDSI | CCRYGG | 1 cut(s) | 1138 |
| BstF5I | GGATG | 6 cut(s) | 208, 277, 348, 427, 640, 868 |
| BstH2I | RGCGCY | 1 cut(s) | 642 |
| BstHHI | GCGC | 1 cut(s) | 641 |
| BstKTI | GATC | 1 cut(s) | 218 |
| BstMAI | GTCTC | 1 cut(s) | 200 |
| BstMBI | GATC | 1 cut(s) | 215 |
| BstMCI | CGRYCG | 1 cut(s) | 615 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 949 |
| BstNI | CCWGG | 3 cut(s) | 19, 36, 353 |
| BstNSI | RCATGY | 1 cut(s) | 776 |
| BstSCI | CCNGG | 6 cut(s) | 17, 34, 239, 351, 1023, 1040 |
| BstSLI | GKGCMC | 1 cut(s) | 1036 |
| BstV1I | GCAGC | 4 cut(s) | 369, 930, 1022, 1068 |
| BstX2I | RGATCY | 1 cut(s) | 215 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 453 |
| BstYI | RGATCY | 1 cut(s) | 215 |
| Bsu36I | CCTNAGG | 1 cut(s) | 873 |
| BsuI | GTATCC | 2 cut(s) | 18, 451 |
| BsuRI | GGCC | 6 cut(s) | 239, 309, 324, 587, 1137, 1143 |
| BtgI | CCRYGG | 1 cut(s) | 1138 |
| BtrI | CACGTC | 2 cut(s) | 232, 361 |
| BtsCI | GGATG | 6 cut(s) | 208, 277, 348, 427, 640, 868 |
| Cac8I | GCNNGC | 3 cut(s) | 774, 802, 806 |
| CciI | TCATGA | 1 cut(s) | 1077 |
| CfoI | GCGC | 1 cut(s) | 641 |
| Cfr13I | GGNCC | 2 cut(s) | 237, 1142 |
| Csp6I | GTAC | 1 cut(s) | 563 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 883, 918, 1114, 1149 |
| CviAII | CATG | 5 cut(s) | 194, 773, 985, 1078, 1139 |
| CviQI | GTAC | 1 cut(s) | 563 |
| DdeI | CTNAG | 4 cut(s) | 335, 654, 873, 1014 |
| DpnI | GATC | 1 cut(s) | 217 |
| DpnII | GATC | 1 cut(s) | 215 |
| EaeI | YGGCCR | 2 cut(s) | 585, 1135 |
| Eam1104I | CTCTTC | 1 cut(s) | 432 |
| EarI | CTCTTC | 1 cut(s) | 432 |
| Eco130I | CCWWGG | 1 cut(s) | 1138 |
| Eco147I | AGGCCT | 2 cut(s) | 309, 324 |
| Eco31I | GGTCTC | 1 cut(s) | 200 |
| Eco57I | CTGAAG | 1 cut(s) | 162 |
| Eco81I | CCTNAGG | 1 cut(s) | 873 |
| EcoRI | GAATTC | 1 cut(s) | 136 |
| EcoRII | CCWGG | 3 cut(s) | 17, 34, 351 |
| EcoT14I | CCWWGG | 1 cut(s) | 1138 |
| ErhI | CCWWGG | 1 cut(s) | 1138 |
| FaeI | CATG | 5 cut(s) | 197, 776, 988, 1081, 1142 |
| FaqI | GGGAC | 1 cut(s) | 412 |
| FatI | CATG | 5 cut(s) | 193, 772, 984, 1077, 1138 |
| FauNDI | CATATG | 1 cut(s) | 432 |
| FblI | GTMKAC | 1 cut(s) | 147 |
| Fnu4HI | GCNGC | 4 cut(s) | 383, 944, 1011, 1057 |
| FokI | GGATG | 6 cut(s) | 215, 264, 335, 434, 647, 855 |
| Fsp4HI | GCNGC | 4 cut(s) | 383, 944, 1011, 1057 |
| FspBI | CTAG | 3 cut(s) | 416, 726, 801 |
| GlaI | GCGC | 1 cut(s) | 640 |
| GluI | GCNGC | 4 cut(s) | 383, 944, 1011, 1057 |
| GsuI | CTGGAG | 2 cut(s) | 40, 99 |
| HaeII | RGCGCY | 1 cut(s) | 642 |
| HaeIII | GGCC | 6 cut(s) | 239, 309, 324, 587, 1137, 1143 |
| HapII | CCGG | 3 cut(s) | 240, 1024, 1041 |
| HhaI | GCGC | 1 cut(s) | 641 |
| Hin1II | CATG | 5 cut(s) | 197, 776, 988, 1081, 1142 |
| Hin6I | GCGC | 1 cut(s) | 639 |
| HinP1I | GCGC | 1 cut(s) | 639 |
| HincII | GTYRAC | 1 cut(s) | 148 |
| HindII | GTYRAC | 1 cut(s) | 148 |
| HindIII | AAGCTT | 1 cut(s) | 712 |
| HinfI | GANTC | 8 cut(s) | 119, 149, 197, 743, 853, 887, 959, 1110 |
| HpaII | CCGG | 3 cut(s) | 240, 1024, 1041 |
| HphI | GGTGA | 2 cut(s) | 182, 752 |
| Hpy166II | GTNNAC | 3 cut(s) | 148, 364, 1034 |
| Hpy188I | TCNGA | 6 cut(s) | 62, 97, 142, 202, 657, 852 |
| Hpy188III | TCNNGA | 6 cut(s) | 116, 281, 793, 884, 932, 1078 |
| Hpy8I | GTNNAC | 3 cut(s) | 148, 364, 1034 |
| HpyCH4III | ACNGT | 4 cut(s) | 57, 368, 902, 1086 |
| HpyCH4IV | ACGT | 3 cut(s) | 231, 360, 673 |
| HpyCH4V | TGCA | 7 cut(s) | 73, 193, 301, 489, 967, 1010, 1034 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 949 |
| HpyF3I | CTNAG | 4 cut(s) | 335, 654, 873, 1014 |
| HpySE526I | ACGT | 3 cut(s) | 231, 360, 673 |
| Hsp92II | CATG | 5 cut(s) | 197, 776, 988, 1081, 1142 |
| HspAI | GCGC | 1 cut(s) | 639 |
| Kzo9I | GATC | 1 cut(s) | 215 |
| LguI | GCTCTTC | 1 cut(s) | 432 |
| Lsp1109I | GCAGC | 4 cut(s) | 369, 930, 1022, 1068 |
| LweI | GCATC | 2 cut(s) | 163, 412 |
| MaeI | CTAG | 3 cut(s) | 416, 726, 801 |
| MaeII | ACGT | 3 cut(s) | 231, 360, 673 |
| MaeIII | GTNAC | 2 cut(s) | 604, 693 |
| MalI | GATC | 1 cut(s) | 217 |
| MboI | GATC | 1 cut(s) | 215 |
| MboII | GAAGA | 3 cut(s) | 214, 419, 511 |
| MfeI | CAATTG | 1 cut(s) | 758 |
| MflI | RGATCY | 1 cut(s) | 215 |
| MhlI | GDGCHC | 1 cut(s) | 1036 |
| MlsI | TGGCCA | 1 cut(s) | 1137 |
| MluCI | AATT | 8 cut(s) | 68, 87, 91, 136, 477, 658, 758, 1062 |
| MluNI | TGGCCA | 1 cut(s) | 1137 |
| MlyI | GAGTC | 5 cut(s) | 113, 143, 206, 968, 1104 |
| MmeI | TCCRAC | 3 cut(s) | 180, 669, 763 |
| Mox20I | TGGCCA | 1 cut(s) | 1137 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1085 |
| MscI | TGGCCA | 1 cut(s) | 1137 |
| MseI | TTAA | 2 cut(s) | 65, 90 |
| MslI | CAYNNNNRTG | 1 cut(s) | 777 |
| Msp20I | TGGCCA | 1 cut(s) | 1137 |
| MspA1I | CMGCKG | 1 cut(s) | 1013 |
| MspI | CCGG | 3 cut(s) | 240, 1024, 1041 |
| MspR9I | CCNGG | 6 cut(s) | 19, 36, 241, 353, 1025, 1042 |
| MunI | CAATTG | 1 cut(s) | 758 |
| Mva1269I | GAATGC | 2 cut(s) | 562, 802 |
| MvaI | CCWGG | 3 cut(s) | 19, 36, 353 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 949 |
| NciI | CCSGG | 3 cut(s) | 241, 1025, 1042 |
| NcoI | CCATGG | 1 cut(s) | 1138 |
| NdeI | CATATG | 1 cut(s) | 432 |
| NdeII | GATC | 1 cut(s) | 215 |
| NheI | GCTAGC | 1 cut(s) | 800 |
| NlaIII | CATG | 5 cut(s) | 197, 776, 988, 1081, 1142 |
| NlaIV | GGNNCC | 1 cut(s) | 238 |
| NmeAIII | GCCGAG | 1 cut(s) | 365 |
| NspI | RCATGY | 1 cut(s) | 776 |
| NspV | TTCGAA | 1 cut(s) | 554 |
| PaeI | GCATGC | 1 cut(s) | 776 |
| PagI | TCATGA | 1 cut(s) | 1077 |
| PceI | AGGCCT | 2 cut(s) | 309, 324 |
| PciSI | GCTCTTC | 1 cut(s) | 432 |
| PctI | GAATGC | 2 cut(s) | 562, 802 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1085 |
| PfeI | GAWTC | 3 cut(s) | 743, 853, 887 |
| PfoI | TCCNGGA | 1 cut(s) | 351 |
| PkrI | GCNGC | 4 cut(s) | 384, 945, 1012, 1058 |
| PleI | GAGTC | 5 cut(s) | 113, 143, 205, 967, 1104 |
| PpsI | GAGTC | 5 cut(s) | 113, 143, 205, 967, 1104 |
| PshBI | ATTAAT | 1 cut(s) | 90 |
| PsiI | TTATAA | 3 cut(s) | 269, 392, 834 |
| Psp1406I | AACGTT | 1 cut(s) | 673 |
| Psp6I | CCWGG | 3 cut(s) | 17, 34, 351 |
| PspGI | CCWGG | 3 cut(s) | 17, 34, 351 |
| PspN4I | GGNNCC | 1 cut(s) | 238 |
| PspPI | GGNCC | 2 cut(s) | 237, 1142 |
| PsuI | RGATCY | 1 cut(s) | 215 |
| PvuII | CAGCTG | 1 cut(s) | 1013 |
| RsaI | GTAC | 1 cut(s) | 564 |
| RsaNI | GTAC | 1 cut(s) | 563 |
| RseI | CAYNNNNRTG | 1 cut(s) | 777 |
| SalI | GTCGAC | 1 cut(s) | 146 |
| SapI | GCTCTTC | 1 cut(s) | 432 |
| SaqAI | TTAA | 2 cut(s) | 65, 90 |
| SatI | GCNGC | 4 cut(s) | 383, 944, 1011, 1057 |
| Sau3AI | GATC | 1 cut(s) | 215 |
| Sau96I | GGNCC | 2 cut(s) | 237, 1142 |
| SchI | GAGTC | 5 cut(s) | 113, 143, 206, 968, 1104 |
| ScrFI | CCNGG | 6 cut(s) | 19, 36, 241, 353, 1025, 1042 |
| SduI | GDGCHC | 1 cut(s) | 1036 |
| SfaNI | GCATC | 2 cut(s) | 163, 412 |
| SfuI | TTCGAA | 1 cut(s) | 554 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 777 |
| SmlI | CTYRAG | 1 cut(s) | 947 |
| SmoI | CTYRAG | 1 cut(s) | 947 |
| SphI | GCATGC | 1 cut(s) | 776 |
| Sse9I | AATT | 8 cut(s) | 68, 87, 91, 136, 477, 658, 758, 1062 |
| SseBI | AGGCCT | 2 cut(s) | 309, 324 |
| SsiI | CCGC | 1 cut(s) | 1131 |
| SspMI | CTAG | 3 cut(s) | 416, 726, 801 |
| StuI | AGGCCT | 2 cut(s) | 309, 324 |
| StyD4I | CCNGG | 6 cut(s) | 17, 34, 239, 351, 1023, 1040 |
| StyI | CCWWGG | 1 cut(s) | 1138 |
| TaaI | ACNGT | 4 cut(s) | 57, 368, 902, 1086 |
| TaiI | ACGT | 3 cut(s) | 234, 363, 676 |
| TaqI | TCGA | 6 cut(s) | 147, 152, 225, 538, 554, 615 |
| TaqII | GACCGA | 1 cut(s) | 601 |
| TasI | AATT | 8 cut(s) | 68, 87, 91, 136, 477, 658, 758, 1062 |
| TatI | WGTACW | 1 cut(s) | 562 |
| TfiI | GAWTC | 3 cut(s) | 743, 853, 887 |
| Tru1I | TTAA | 2 cut(s) | 65, 90 |
| Tru9I | TTAA | 2 cut(s) | 65, 90 |
| TseI | GCWGC | 4 cut(s) | 382, 943, 1010, 1056 |
| TspDTI | ATGAA | 6 cut(s) | 419, 497, 1001, 1066, 1088, 1094 |
| VneI | GTGCAC | 1 cut(s) | 1032 |
| VspI | ATTAAT | 1 cut(s) | 90 |
| XapI | RAATTY | 2 cut(s) | 136, 658 |
| XceI | RCATGY | 1 cut(s) | 776 |
| XmiI | GTMKAC | 1 cut(s) | 147 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1085 |
| XspI | CTAG | 3 cut(s) | 416, 726, 801 |