protein ubiquitination
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 284 |
| AciI | CCGC | 2 cut(s) | 7, 282 |
| AclI | AACGTT | 2 cut(s) | 189, 382 |
| AcoI | YGGCCR | 2 cut(s) | 396, 441 |
| AcsI | RAATTY | 2 cut(s) | 63, 361 |
| AfaI | GTAC | 1 cut(s) | 325 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 13, 394 |
| AgsI | TTSAA | 4 cut(s) | 68, 128, 380, 463 |
| AluBI | AGCT | 2 cut(s) | 89, 134 |
| AluI | AGCT | 2 cut(s) | 89, 134 |
| AoxI | GGCC | 3 cut(s) | 198, 396, 441 |
| ApoI | RAATTY | 2 cut(s) | 63, 361 |
| AseI | ATTAAT | 1 cut(s) | 164 |
| AspS9I | GGNCC | 1 cut(s) | 199 |
| BalI | TGGCCA | 2 cut(s) | 398, 443 |
| BbsI | GAAGAC | 1 cut(s) | 60 |
| BfmI | CTRYAG | 1 cut(s) | 405 |
| BisI | GCNGC | 2 cut(s) | 7, 282 |
| BlsI | GCNGC | 2 cut(s) | 8, 283 |
| BmgT120I | GGNCC | 1 cut(s) | 199 |
| BpiI | GAAGAC | 1 cut(s) | 60 |
| BsaJI | CCNNGG | 1 cut(s) | 399 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 13, 394 |
| BseDI | CCNNGG | 1 cut(s) | 399 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 13, 394 |
| BshFI | GGCC | 3 cut(s) | 200, 398, 443 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 13, 394 |
| BsmI | GAATGC | 2 cut(s) | 143, 458 |
| BsnI | GGCC | 3 cut(s) | 200, 398, 443 |
| Bsp143I | GATC | 1 cut(s) | 498 |
| Bsp19I | CCATGG | 1 cut(s) | 399 |
| BspACI | CCGC | 2 cut(s) | 7, 282 |
| BspANI | GGCC | 3 cut(s) | 200, 398, 443 |
| BsrBI | CCGCTC | 1 cut(s) | 284 |
| BssECI | CCNNGG | 1 cut(s) | 399 |
| BssMI | GATC | 1 cut(s) | 498 |
| BssT1I | CCWWGG | 1 cut(s) | 399 |
| Bst4CI | ACNGT | 3 cut(s) | 30, 74, 452 |
| BstC8I | GCNNGC | 2 cut(s) | 143, 232 |
| BstDEI | CTNAG | 1 cut(s) | 430 |
| BstDSI | CCRYGG | 1 cut(s) | 399 |
| BstKTI | GATC | 1 cut(s) | 501 |
| BstMBI | GATC | 1 cut(s) | 498 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 15 |
| BstNSI | RCATGY | 1 cut(s) | 145 |
| BstSFI | CTRYAG | 1 cut(s) | 405 |
| BstV2I | GAAGAC | 1 cut(s) | 60 |
| BsuRI | GGCC | 3 cut(s) | 200, 398, 443 |
| BtgI | CCRYGG | 1 cut(s) | 399 |
| Cac8I | GCNNGC | 2 cut(s) | 143, 232 |
| Cfr13I | GGNCC | 1 cut(s) | 199 |
| Csp6I | GTAC | 1 cut(s) | 324 |
| CviAII | CATG | 2 cut(s) | 142, 400 |
| CviQI | GTAC | 1 cut(s) | 324 |
| DdeI | CTNAG | 1 cut(s) | 430 |
| DpnI | GATC | 1 cut(s) | 500 |
| DpnII | GATC | 1 cut(s) | 498 |
| EaeI | YGGCCR | 2 cut(s) | 396, 441 |
| Eco130I | CCWWGG | 1 cut(s) | 399 |
| EcoT14I | CCWWGG | 1 cut(s) | 399 |
| EcoT22I | ATGCAT | 1 cut(s) | 143 |
| ErhI | CCWWGG | 1 cut(s) | 399 |
| FaeI | CATG | 2 cut(s) | 145, 403 |
| FaiI | YATR | 8 cut(s) | 23, 143, 367, 369, 401, 423, 487, 507 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 41, 73 |
| FatI | CATG | 2 cut(s) | 141, 399 |
| Fnu4HI | GCNGC | 2 cut(s) | 7, 282 |
| Fsp4HI | GCNGC | 2 cut(s) | 7, 282 |
| GluI | GCNGC | 2 cut(s) | 7, 282 |
| HaeIII | GGCC | 3 cut(s) | 200, 398, 443 |
| Hin1II | CATG | 2 cut(s) | 145, 403 |
| HinfI | GANTC | 2 cut(s) | 376, 477 |
| Hpy188III | TCNNGA | 2 cut(s) | 68, 116 |
| Hpy99I | CGWCG | 1 cut(s) | 419 |
| HpyCH4III | ACNGT | 3 cut(s) | 30, 74, 452 |
| HpyCH4IV | ACGT | 2 cut(s) | 189, 382 |
| HpyCH4V | TGCA | 2 cut(s) | 141, 458 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 15 |
| HpyF3I | CTNAG | 1 cut(s) | 430 |
| HpySE526I | ACGT | 2 cut(s) | 189, 382 |
| Hsp92II | CATG | 2 cut(s) | 145, 403 |
| Kzo9I | GATC | 1 cut(s) | 498 |
| LpnPI | CCDG | 2 cut(s) | 129, 349 |
| MaeII | ACGT | 2 cut(s) | 189, 382 |
| MaeIII | GTNAC | 3 cut(s) | 173, 354, 383 |
| MalI | GATC | 1 cut(s) | 500 |
| MbiI | CCGCTC | 1 cut(s) | 284 |
| MboI | GATC | 1 cut(s) | 498 |
| MboII | GAAGA | 2 cut(s) | 65, 140 |
| MlsI | TGGCCA | 2 cut(s) | 398, 443 |
| MluCI | AATT | 8 cut(s) | 63, 106, 161, 327, 361, 392, 482, 494 |
| MluNI | TGGCCA | 2 cut(s) | 398, 443 |
| MlyI | GAGTC | 1 cut(s) | 471 |
| MnlI | CCTC | 1 cut(s) | 257 |
| Mox20I | TGGCCA | 2 cut(s) | 398, 443 |
| Mph1103I | ATGCAT | 1 cut(s) | 143 |
| MscI | TGGCCA | 2 cut(s) | 398, 443 |
| MseI | TTAA | 4 cut(s) | 41, 147, 164, 266 |
| Msp20I | TGGCCA | 2 cut(s) | 398, 443 |
| Mva1269I | GAATGC | 2 cut(s) | 143, 458 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 15 |
| NcoI | CCATGG | 1 cut(s) | 399 |
| NdeII | GATC | 1 cut(s) | 498 |
| NlaIII | CATG | 2 cut(s) | 145, 403 |
| NsiI | ATGCAT | 1 cut(s) | 143 |
| NspI | RCATGY | 1 cut(s) | 145 |
| PaeI | GCATGC | 1 cut(s) | 145 |
| PctI | GAATGC | 2 cut(s) | 143, 458 |
| PfeI | GAWTC | 1 cut(s) | 376 |
| PkrI | GCNGC | 2 cut(s) | 8, 283 |
| PleI | GAGTC | 1 cut(s) | 471 |
| PpsI | GAGTC | 1 cut(s) | 471 |
| PshBI | ATTAAT | 1 cut(s) | 164 |
| Psp1406I | AACGTT | 2 cut(s) | 189, 382 |
| PspPI | GGNCC | 1 cut(s) | 199 |
| RsaI | GTAC | 1 cut(s) | 325 |
| RsaNI | GTAC | 1 cut(s) | 324 |
| SaqAI | TTAA | 4 cut(s) | 41, 147, 164, 266 |
| SatI | GCNGC | 2 cut(s) | 7, 282 |
| Sau3AI | GATC | 1 cut(s) | 498 |
| Sau96I | GGNCC | 1 cut(s) | 199 |
| SchI | GAGTC | 1 cut(s) | 471 |
| SetI | ASST | 5 cut(s) | 91, 136, 173, 192, 385 |
| SfcI | CTRYAG | 1 cut(s) | 405 |
| SphI | GCATGC | 1 cut(s) | 145 |
| Sse9I | AATT | 8 cut(s) | 63, 106, 161, 327, 361, 392, 482, 494 |
| SsiI | CCGC | 2 cut(s) | 7, 282 |
| StyI | CCWWGG | 1 cut(s) | 399 |
| TaaI | ACNGT | 3 cut(s) | 30, 74, 452 |
| TaiI | ACGT | 2 cut(s) | 192, 385 |
| TaqI | TCGA | 3 cut(s) | 206, 276, 414 |
| TasI | AATT | 8 cut(s) | 63, 106, 161, 327, 361, 392, 482, 494 |
| TauI | GCSGC | 2 cut(s) | 9, 284 |
| TfiI | GAWTC | 1 cut(s) | 376 |
| Tru1I | TTAA | 4 cut(s) | 41, 147, 164, 266 |
| Tru9I | TTAA | 4 cut(s) | 41, 147, 164, 266 |
| TspGWI | ACGGA | 1 cut(s) | 68 |
| VspI | ATTAAT | 1 cut(s) | 164 |
| XapI | RAATTY | 2 cut(s) | 63, 361 |
| XceI | RCATGY | 1 cut(s) | 145 |
| Zsp2I | ATGCAT | 1 cut(s) | 143 |