protein ubiquitination
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| PGG | PF13962 | 204 - 316 | 1.7e-25 | Domain of unknown function |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 279 |
| AciI | CCGC | 1 cut(s) | 252 |
| AclWI | GGATC | 1 cut(s) | 865 |
| AcsI | RAATTY | 3 cut(s) | 610, 631, 1105 |
| AcuI | CTGAAG | 1 cut(s) | 861 |
| AdeI | CACNNNGTG | 1 cut(s) | 140 |
| AfaI | GTAC | 3 cut(s) | 207, 640, 1016 |
| AgsI | TTSAA | 5 cut(s) | 127, 455, 496, 615, 1085 |
| AjiI | CACGTC | 1 cut(s) | 828 |
| AjnI | CCWGG | 1 cut(s) | 694 |
| AluBI | AGCT | 1 cut(s) | 70 |
| AluI | AGCT | 1 cut(s) | 70 |
| Alw21I | GWGCWC | 1 cut(s) | 655 |
| AlwI | GGATC | 1 cut(s) | 865 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 238, 695 |
| AoxI | GGCC | 3 cut(s) | 319, 340, 883 |
| ApeKI | GCWGC | 2 cut(s) | 146, 677 |
| ApoI | RAATTY | 3 cut(s) | 610, 631, 1105 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 239 |
| AspS9I | GGNCC | 1 cut(s) | 52 |
| AsuHPI | GGTGA | 2 cut(s) | 655, 883 |
| AsuNHI | GCTAGC | 1 cut(s) | 991 |
| AvaII | GGWCC | 1 cut(s) | 52 |
| BbsI | GAAGAC | 1 cut(s) | 713 |
| Bbv12I | GWGCWC | 1 cut(s) | 655 |
| BbvI | GCAGC | 2 cut(s) | 158, 664 |
| BccI | CCATC | 1 cut(s) | 950 |
| BciT130I | CCWGG | 1 cut(s) | 696 |
| BclI | TGATCA | 1 cut(s) | 445 |
| BfaI | CTAG | 2 cut(s) | 308, 992 |
| BfmI | CTRYAG | 1 cut(s) | 65 |
| BisI | GCNGC | 3 cut(s) | 147, 252, 678 |
| BlsI | GCNGC | 3 cut(s) | 148, 253, 679 |
| Bme1390I | CCNGG | 1 cut(s) | 696 |
| Bme18I | GGWCC | 1 cut(s) | 52 |
| BmgBI | CACGTC | 1 cut(s) | 828 |
| BmgT120I | GGNCC | 1 cut(s) | 52 |
| BmiI | GGNNCC | 1 cut(s) | 53 |
| BmrFI | CCNGG | 1 cut(s) | 696 |
| BmsI | GCATC | 4 cut(s) | 30, 52, 376, 1014 |
| BmtI | GCTAGC | 1 cut(s) | 995 |
| BpiI | GAAGAC | 1 cut(s) | 713 |
| Bsa29I | ATCGAT | 1 cut(s) | 968 |
| BsaJI | CCNNGG | 2 cut(s) | 391, 853 |
| Bse1I | ACTGG | 1 cut(s) | 996 |
| Bse3DI | GCAATG | 3 cut(s) | 510, 860, 1034 |
| BseBI | CCWGG | 1 cut(s) | 696 |
| BseCI | ATCGAT | 1 cut(s) | 968 |
| BseDI | CCNNGG | 2 cut(s) | 391, 853 |
| BseGI | GGATG | 1 cut(s) | 1029 |
| BseMI | GCAATG | 3 cut(s) | 510, 860, 1034 |
| BseNI | ACTGG | 1 cut(s) | 996 |
| BseXI | GCAGC | 2 cut(s) | 158, 664 |
| BshFI | GGCC | 3 cut(s) | 321, 342, 885 |
| BshVI | ATCGAT | 1 cut(s) | 968 |
| BsiHKAI | GWGCWC | 1 cut(s) | 655 |
| BsnI | GGCC | 3 cut(s) | 321, 342, 885 |
| Bsp1286I | GDGCHC | 1 cut(s) | 655 |
| Bsp1407I | TGTACA | 1 cut(s) | 638 |
| Bsp143I | GATC | 2 cut(s) | 445, 857 |
| BspACI | CCGC | 1 cut(s) | 252 |
| BspANI | GGCC | 3 cut(s) | 321, 342, 885 |
| BspDI | ATCGAT | 1 cut(s) | 968 |
| BspLI | GGNNCC | 1 cut(s) | 53 |
| BspOI | GCTAGC | 1 cut(s) | 995 |
| BspPI | GGATC | 1 cut(s) | 865 |
| BsrDI | GCAATG | 3 cut(s) | 510, 860, 1034 |
| BsrGI | TGTACA | 1 cut(s) | 638 |
| BsrI | ACTGG | 1 cut(s) | 996 |
| BssECI | CCNNGG | 2 cut(s) | 391, 853 |
| BssMI | GATC | 2 cut(s) | 445, 857 |
| BssT1I | CCWWGG | 1 cut(s) | 391 |
| Bst2UI | CCWGG | 1 cut(s) | 696 |
| Bst4CI | ACNGT | 5 cut(s) | 85, 138, 415, 643, 691 |
| BstAUI | TGTACA | 1 cut(s) | 638 |
| BstC8I | GCNNGC | 1 cut(s) | 993 |
| BstDSI | CCRYGG | 1 cut(s) | 853 |
| BstF5I | GGATG | 1 cut(s) | 1029 |
| BstKTI | GATC | 2 cut(s) | 448, 860 |
| BstMBI | GATC | 2 cut(s) | 445, 857 |
| BstNI | CCWGG | 1 cut(s) | 696 |
| BstNSI | RCATGY | 1 cut(s) | 164 |
| BstSCI | CCNGG | 1 cut(s) | 694 |
| BstSFI | CTRYAG | 1 cut(s) | 65 |
| BstV1I | GCAGC | 2 cut(s) | 158, 664 |
| BstV2I | GAAGAC | 1 cut(s) | 713 |
| Bsu15I | ATCGAT | 1 cut(s) | 968 |
| BsuRI | GGCC | 3 cut(s) | 321, 342, 885 |
| BsuTUI | ATCGAT | 1 cut(s) | 968 |
| BtgI | CCRYGG | 1 cut(s) | 853 |
| BtrI | CACGTC | 1 cut(s) | 828 |
| BtsCI | GGATG | 1 cut(s) | 1029 |
| BtsIMutI | CAGTG | 3 cut(s) | 90, 134, 1003 |
| Cac8I | GCNNGC | 1 cut(s) | 993 |
| CaiI | CAGNNNCTG | 2 cut(s) | 238, 695 |
| Cfr13I | GGNCC | 1 cut(s) | 52 |
| ClaI | ATCGAT | 1 cut(s) | 968 |
| CseI | GACGC | 1 cut(s) | 779 |
| Csp6I | GTAC | 3 cut(s) | 206, 639, 1015 |
| CviAII | CATG | 4 cut(s) | 73, 161, 808, 916 |
| CviJI | RGCY | 6 cut(s) | 70, 321, 342, 885, 995, 1120 |
| CviKI_1 | RGCY | 6 cut(s) | 70, 321, 342, 885, 995, 1120 |
| CviQI | GTAC | 3 cut(s) | 206, 639, 1015 |
| DpnI | GATC | 2 cut(s) | 447, 859 |
| DpnII | GATC | 2 cut(s) | 445, 857 |
| DraI | TTTAAA | 1 cut(s) | 1111 |
| DraIII | CACNNNGTG | 1 cut(s) | 140 |
| Eco130I | CCWWGG | 1 cut(s) | 391 |
| Eco147I | AGGCCT | 1 cut(s) | 885 |
| Eco47I | GGWCC | 1 cut(s) | 52 |
| Eco57I | CTGAAG | 1 cut(s) | 861 |
| EcoRII | CCWGG | 1 cut(s) | 694 |
| EcoT14I | CCWWGG | 1 cut(s) | 391 |
| EcoT22I | ATGCAT | 1 cut(s) | 45 |
| ErhI | CCWWGG | 1 cut(s) | 391 |
| FaeI | CATG | 4 cut(s) | 76, 164, 811, 919 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 375, 407 |
| FatI | CATG | 4 cut(s) | 72, 160, 807, 915 |
| FbaI | TGATCA | 1 cut(s) | 445 |
| Fnu4HI | GCNGC | 3 cut(s) | 147, 252, 678 |
| FokI | GGATG | 1 cut(s) | 1036 |
| Fsp4HI | GCNGC | 3 cut(s) | 147, 252, 678 |
| FspBI | CTAG | 2 cut(s) | 308, 992 |
| GluI | GCNGC | 3 cut(s) | 147, 252, 678 |
| HaeIII | GGCC | 3 cut(s) | 321, 342, 885 |
| HgaI | GACGC | 1 cut(s) | 779 |
| Hin1II | CATG | 4 cut(s) | 76, 164, 811, 919 |
| HinfI | GANTC | 4 cut(s) | 12, 533, 580, 1046 |
| HphI | GGTGA | 2 cut(s) | 655, 883 |
| Hpy166II | GTNNAC | 1 cut(s) | 541 |
| Hpy188I | TCNGA | 5 cut(s) | 30, 234, 302, 355, 769 |
| Hpy188III | TCNNGA | 2 cut(s) | 333, 496 |
| Hpy8I | GTNNAC | 1 cut(s) | 541 |
| Hpy99I | CGWCG | 1 cut(s) | 1015 |
| HpyAV | CCTTC | 4 cut(s) | 350, 353, 493, 613 |
| HpyCH4III | ACNGT | 5 cut(s) | 85, 138, 415, 643, 691 |
| HpyCH4IV | ACGT | 4 cut(s) | 450, 827, 832, 1010 |
| HpyCH4V | TGCA | 8 cut(s) | 43, 212, 461, 469, 475, 515, 680, 1027 |
| HpySE526I | ACGT | 4 cut(s) | 450, 827, 832, 1010 |
| Hsp92II | CATG | 4 cut(s) | 76, 164, 811, 919 |
| Ksp22I | TGATCA | 1 cut(s) | 445 |
| Kzo9I | GATC | 2 cut(s) | 445, 857 |
| LmnI | GCTCC | 2 cut(s) | 303, 376 |
| LpnPI | CCDG | 7 cut(s) | 68, 251, 346, 681, 702, 708, 1009 |
| Lsp1109I | GCAGC | 2 cut(s) | 158, 664 |
| LweI | GCATC | 4 cut(s) | 30, 52, 376, 1014 |
| MaeI | CTAG | 2 cut(s) | 308, 992 |
| MaeII | ACGT | 4 cut(s) | 450, 827, 832, 1010 |
| MaeIII | GTNAC | 3 cut(s) | 263, 712, 828 |
| MalI | GATC | 2 cut(s) | 447, 859 |
| MboI | GATC | 2 cut(s) | 445, 857 |
| MboII | GAAGA | 5 cut(s) | 104, 107, 713, 780, 854 |
| MhlI | GDGCHC | 1 cut(s) | 655 |
| MlyI | GAGTC | 1 cut(s) | 1055 |
| MmeI | TCCRAC | 1 cut(s) | 1004 |
| MnlI | CCTC | 5 cut(s) | 149, 205, 332, 595, 905 |
| Mph1103I | ATGCAT | 1 cut(s) | 45 |
| MroXI | GAANNNNTTC | 1 cut(s) | 239 |
| MseI | TTAA | 3 cut(s) | 734, 1100, 1110 |
| MslI | CAYNNNNRTG | 4 cut(s) | 384, 668, 872, 917 |
| MspA1I | CMGCKG | 1 cut(s) | 254 |
| MspR9I | CCNGG | 1 cut(s) | 696 |
| MvaI | CCWGG | 1 cut(s) | 696 |
| NdeII | GATC | 2 cut(s) | 445, 857 |
| NheI | GCTAGC | 1 cut(s) | 991 |
| NlaIII | CATG | 4 cut(s) | 76, 164, 811, 919 |
| NlaIV | GGNNCC | 1 cut(s) | 53 |
| NmuCI | GTSAC | 2 cut(s) | 263, 828 |
| NsiI | ATGCAT | 1 cut(s) | 45 |
| NspI | RCATGY | 1 cut(s) | 164 |
| PceI | AGGCCT | 1 cut(s) | 885 |
| PdmI | GAANNNNTTC | 1 cut(s) | 239 |
| PfeI | GAWTC | 3 cut(s) | 12, 533, 580 |
| PkrI | GCNGC | 3 cut(s) | 148, 253, 679 |
| PleI | GAGTC | 1 cut(s) | 1054 |
| PpsI | GAGTC | 1 cut(s) | 1054 |
| PsiI | TTATAA | 1 cut(s) | 279 |
| Psp6I | CCWGG | 1 cut(s) | 694 |
| PspGI | CCWGG | 1 cut(s) | 694 |
| PspN4I | GGNNCC | 1 cut(s) | 53 |
| PspPI | GGNCC | 1 cut(s) | 52 |
| PstNI | CAGNNNCTG | 2 cut(s) | 238, 695 |
| RsaI | GTAC | 3 cut(s) | 207, 640, 1016 |
| RsaNI | GTAC | 3 cut(s) | 206, 639, 1015 |
| RseI | CAYNNNNRTG | 4 cut(s) | 384, 668, 872, 917 |
| SaqAI | TTAA | 3 cut(s) | 734, 1100, 1110 |
| SatI | GCNGC | 3 cut(s) | 147, 252, 678 |
| Sau3AI | GATC | 2 cut(s) | 445, 857 |
| Sau96I | GGNCC | 1 cut(s) | 52 |
| SchI | GAGTC | 1 cut(s) | 1055 |
| ScrFI | CCNGG | 1 cut(s) | 696 |
| SduI | GDGCHC | 1 cut(s) | 655 |
| SfaNI | GCATC | 4 cut(s) | 30, 52, 376, 1014 |
| SfcI | CTRYAG | 1 cut(s) | 65 |
| SinI | GGWCC | 1 cut(s) | 52 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 384, 668, 872, 917 |
| SseBI | AGGCCT | 1 cut(s) | 885 |
| SsiI | CCGC | 1 cut(s) | 252 |
| SspI | AATATT | 1 cut(s) | 684 |
| SspMI | CTAG | 2 cut(s) | 308, 992 |
| StuI | AGGCCT | 1 cut(s) | 885 |
| StyD4I | CCNGG | 1 cut(s) | 694 |
| StyI | CCWWGG | 1 cut(s) | 391 |
| TaaI | ACNGT | 5 cut(s) | 85, 138, 415, 643, 691 |
| TaiI | ACGT | 4 cut(s) | 453, 830, 835, 1013 |
| TaqI | TCGA | 2 cut(s) | 968, 1076 |
| TatI | WGTACW | 1 cut(s) | 638 |
| TauI | GCSGC | 1 cut(s) | 254 |
| TfiI | GAWTC | 3 cut(s) | 12, 533, 580 |
| Tru1I | TTAA | 3 cut(s) | 734, 1100, 1110 |
| Tru9I | TTAA | 3 cut(s) | 734, 1100, 1110 |
| TscAI | CASTG | 3 cut(s) | 90, 141, 1003 |
| TseFI | GTSAC | 2 cut(s) | 263, 828 |
| TseI | GCWGC | 2 cut(s) | 146, 677 |
| Tsp45I | GTSAC | 2 cut(s) | 263, 828 |
| TspGWI | ACGGA | 2 cut(s) | 590, 870 |
| TspRI | CASTG | 3 cut(s) | 90, 141, 1003 |
| VpaK11BI | GGWCC | 1 cut(s) | 52 |
| XapI | RAATTY | 3 cut(s) | 610, 631, 1105 |
| XceI | RCATGY | 1 cut(s) | 164 |
| XmnI | GAANNNNTTC | 1 cut(s) | 239 |
| XspI | CTAG | 2 cut(s) | 308, 992 |
| Zsp2I | ATGCAT | 1 cut(s) | 45 |