protein ubiquitination
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Ank_2 | PF12796 | 56 - 138 | 1.4e-06 | Ankyrin repeats (3 copies) |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 738 |
| AccII | CGCG | 1 cut(s) | 549 |
| AciI | CCGC | 5 cut(s) | 148, 253, 287, 362, 547 |
| AclI | AACGTT | 1 cut(s) | 583 |
| AcuI | CTGAAG | 1 cut(s) | 554 |
| AcvI | CACGTG | 1 cut(s) | 683 |
| AcyI | GRCGYC | 1 cut(s) | 72 |
| AgsI | TTSAA | 2 cut(s) | 103, 527 |
| AjiI | CACGTC | 1 cut(s) | 262 |
| AleI | CACNNNNGTG | 1 cut(s) | 648 |
| AluBI | AGCT | 3 cut(s) | 532, 624, 712 |
| AluI | AGCT | 3 cut(s) | 532, 624, 712 |
| Alw21I | GWGCWC | 1 cut(s) | 682 |
| Alw44I | GTGCAC | 1 cut(s) | 678 |
| AoxI | GGCC | 1 cut(s) | 627 |
| ApaLI | GTGCAC | 1 cut(s) | 678 |
| AspLEI | GCGC | 1 cut(s) | 551 |
| AspS9I | GGNCC | 1 cut(s) | 544 |
| AsuHPI | GGTGA | 3 cut(s) | 101, 230, 662 |
| AsuNHI | GCTAGC | 1 cut(s) | 358 |
| AvaII | GGWCC | 1 cut(s) | 544 |
| BaeGI | GKGCMC | 1 cut(s) | 682 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 98, 131, 357, 390 |
| BbrPI | CACGTG | 1 cut(s) | 683 |
| Bbv12I | GWGCWC | 1 cut(s) | 682 |
| BccI | CCATC | 2 cut(s) | 80, 723 |
| BceAI | ACGGC | 3 cut(s) | 246, 371, 626 |
| BciVI | GTATCC | 1 cut(s) | 358 |
| BfaI | CTAG | 2 cut(s) | 317, 359 |
| BfuI | GTATCC | 1 cut(s) | 358 |
| BisI | GCNGC | 2 cut(s) | 149, 287 |
| BlsI | GCNGC | 2 cut(s) | 150, 288 |
| Bme18I | GGWCC | 1 cut(s) | 544 |
| BmgBI | CACGTC | 1 cut(s) | 262 |
| BmgT120I | GGNCC | 1 cut(s) | 544 |
| BmiI | GGNNCC | 1 cut(s) | 545 |
| BmsI | GCATC | 2 cut(s) | 82, 160 |
| BmtI | GCTAGC | 1 cut(s) | 362 |
| BpmI | CTGGAG | 1 cut(s) | 504 |
| BsaAI | YACGTR | 1 cut(s) | 683 |
| BsaHI | GRCGYC | 1 cut(s) | 72 |
| BsaJI | CCNNGG | 1 cut(s) | 630 |
| BsaWI | WCCGGW | 1 cut(s) | 647 |
| Bse1I | ACTGG | 1 cut(s) | 521 |
| BseDI | CCNNGG | 1 cut(s) | 630 |
| BseGI | GGATG | 1 cut(s) | 190 |
| BseMII | CTCAG | 1 cut(s) | 566 |
| BseNI | ACTGG | 1 cut(s) | 521 |
| BseRI | GAGGAG | 1 cut(s) | 327 |
| BseSI | GKGCMC | 1 cut(s) | 682 |
| Bsh1236I | CGCG | 1 cut(s) | 549 |
| BshFI | GGCC | 1 cut(s) | 629 |
| BsiHKAI | GWGCWC | 1 cut(s) | 682 |
| BsiSI | CCGG | 1 cut(s) | 648 |
| BslFI | GGGAC | 1 cut(s) | 557 |
| BsmFI | GGGAC | 1 cut(s) | 557 |
| BsnI | GGCC | 1 cut(s) | 629 |
| Bsp1286I | GDGCHC | 1 cut(s) | 682 |
| Bsp143I | GATC | 1 cut(s) | 436 |
| BspACI | CCGC | 5 cut(s) | 148, 253, 287, 362, 547 |
| BspANI | GGCC | 1 cut(s) | 629 |
| BspCNI | CTCAG | 1 cut(s) | 565 |
| BspFNI | CGCG | 1 cut(s) | 549 |
| BspHI | TCATGA | 1 cut(s) | 67 |
| BspLI | GGNNCC | 1 cut(s) | 545 |
| BspOI | GCTAGC | 1 cut(s) | 362 |
| BspQI | GCTCTTC | 1 cut(s) | 240 |
| BsrI | ACTGG | 1 cut(s) | 521 |
| BssECI | CCNNGG | 1 cut(s) | 630 |
| BssMI | GATC | 1 cut(s) | 436 |
| BssNI | GRCGYC | 1 cut(s) | 72 |
| BssT1I | CCWWGG | 1 cut(s) | 630 |
| Bst4CI | ACNGT | 1 cut(s) | 743 |
| Bst6I | CTCTTC | 2 cut(s) | 36, 240 |
| BstACI | GRCGYC | 1 cut(s) | 72 |
| BstBAI | YACGTR | 1 cut(s) | 683 |
| BstC8I | GCNNGC | 3 cut(s) | 360, 706, 710 |
| BstDEI | CTNAG | 1 cut(s) | 552 |
| BstF5I | GGATG | 1 cut(s) | 190 |
| BstFNI | CGCG | 1 cut(s) | 549 |
| BstHHI | GCGC | 1 cut(s) | 551 |
| BstKTI | GATC | 1 cut(s) | 439 |
| BstMBI | GATC | 1 cut(s) | 436 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 206 |
| BstSLI | GKGCMC | 1 cut(s) | 682 |
| BstUI | CGCG | 1 cut(s) | 549 |
| BsuI | GTATCC | 1 cut(s) | 358 |
| BsuRI | GGCC | 1 cut(s) | 629 |
| BtrI | CACGTC | 1 cut(s) | 262 |
| BtsCI | GGATG | 1 cut(s) | 190 |
| Cac8I | GCNNGC | 3 cut(s) | 360, 706, 710 |
| CciI | TCATGA | 1 cut(s) | 67 |
| CfoI | GCGC | 1 cut(s) | 551 |
| Cfr13I | GGNCC | 1 cut(s) | 544 |
| CseI | GACGC | 1 cut(s) | 80 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 447, 482 |
| CviAII | CATG | 2 cut(s) | 68, 220 |
| DdeI | CTNAG | 1 cut(s) | 552 |
| DpnI | GATC | 1 cut(s) | 438 |
| DpnII | GATC | 1 cut(s) | 436 |
| Eam1104I | CTCTTC | 2 cut(s) | 36, 240 |
| EarI | CTCTTC | 2 cut(s) | 36, 240 |
| Eco130I | CCWWGG | 1 cut(s) | 630 |
| Eco47I | GGWCC | 1 cut(s) | 544 |
| Eco57I | CTGAAG | 1 cut(s) | 554 |
| Eco72I | CACGTG | 1 cut(s) | 683 |
| EcoT14I | CCWWGG | 1 cut(s) | 630 |
| ErhI | CCWWGG | 1 cut(s) | 630 |
| FaeI | CATG | 2 cut(s) | 71, 223 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 483, 515 |
| FaqI | GGGAC | 1 cut(s) | 557 |
| FatI | CATG | 2 cut(s) | 67, 219 |
| FauI | CCCGC | 1 cut(s) | 246 |
| Fnu4HI | GCNGC | 2 cut(s) | 149, 287 |
| FokI | GGATG | 1 cut(s) | 177 |
| Fsp4HI | GCNGC | 2 cut(s) | 149, 287 |
| FspBI | CTAG | 2 cut(s) | 317, 359 |
| GlaI | GCGC | 1 cut(s) | 550 |
| GluI | GCNGC | 2 cut(s) | 149, 287 |
| GsuI | CTGGAG | 1 cut(s) | 504 |
| HaeIII | GGCC | 1 cut(s) | 629 |
| HapII | CCGG | 1 cut(s) | 648 |
| HgaI | GACGC | 1 cut(s) | 80 |
| HhaI | GCGC | 1 cut(s) | 551 |
| Hin1I | GRCGYC | 1 cut(s) | 72 |
| Hin1II | CATG | 2 cut(s) | 71, 223 |
| Hin6I | GCGC | 1 cut(s) | 549 |
| HinP1I | GCGC | 1 cut(s) | 549 |
| HincII | GTYRAC | 1 cut(s) | 58 |
| HindII | GTYRAC | 1 cut(s) | 58 |
| HindIII | AAGCTT | 1 cut(s) | 622 |
| HinfI | GANTC | 3 cut(s) | 64, 77, 653 |
| HpaII | CCGG | 1 cut(s) | 648 |
| HphI | GGTGA | 3 cut(s) | 101, 230, 662 |
| Hpy166II | GTNNAC | 2 cut(s) | 58, 680 |
| Hpy188I | TCNGA | 3 cut(s) | 156, 555, 716 |
| Hpy188III | TCNNGA | 2 cut(s) | 68, 194 |
| Hpy8I | GTNNAC | 2 cut(s) | 58, 680 |
| HpyAV | CCTTC | 1 cut(s) | 166 |
| HpyCH4III | ACNGT | 1 cut(s) | 743 |
| HpyCH4IV | ACGT | 4 cut(s) | 130, 261, 583, 682 |
| HpyCH4V | TGCA | 5 cut(s) | 128, 396, 427, 680, 704 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 206 |
| HpyF3I | CTNAG | 1 cut(s) | 552 |
| HpySE526I | ACGT | 4 cut(s) | 130, 261, 583, 682 |
| Hsp92I | GRCGYC | 1 cut(s) | 72 |
| Hsp92II | CATG | 2 cut(s) | 71, 223 |
| HspAI | GCGC | 1 cut(s) | 549 |
| Kzo9I | GATC | 1 cut(s) | 436 |
| LguI | GCTCTTC | 1 cut(s) | 240 |
| LpnPI | CCDG | 6 cut(s) | 207, 332, 534, 661, 672, 722 |
| LweI | GCATC | 2 cut(s) | 82, 160 |
| MaeI | CTAG | 2 cut(s) | 317, 359 |
| MaeII | ACGT | 4 cut(s) | 130, 261, 583, 682 |
| MaeIII | GTNAC | 1 cut(s) | 514 |
| MalI | GATC | 1 cut(s) | 438 |
| MboI | GATC | 1 cut(s) | 436 |
| MboII | GAAGA | 4 cut(s) | 53, 227, 418, 547 |
| MfeI | CAATTG | 1 cut(s) | 81 |
| MhlI | GDGCHC | 1 cut(s) | 682 |
| MluCI | AATT | 7 cut(s) | 5, 46, 81, 157, 384, 430, 558 |
| MlyI | GAGTC | 1 cut(s) | 71 |
| MmeI | TCCRAC | 1 cut(s) | 579 |
| MnlI | CCTC | 3 cut(s) | 190, 250, 348 |
| MseI | TTAA | 6 cut(s) | 183, 390, 578, 605, 662, 698 |
| MslI | CAYNNNNRTG | 1 cut(s) | 648 |
| MspI | CCGG | 1 cut(s) | 648 |
| MunI | CAATTG | 1 cut(s) | 81 |
| MvnI | CGCG | 1 cut(s) | 549 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 206 |
| NdeII | GATC | 1 cut(s) | 436 |
| NheI | GCTAGC | 1 cut(s) | 358 |
| NlaIII | CATG | 2 cut(s) | 71, 223 |
| NlaIV | GGNNCC | 1 cut(s) | 545 |
| OliI | CACNNNNGTG | 1 cut(s) | 648 |
| PagI | TCATGA | 1 cut(s) | 67 |
| PciSI | GCTCTTC | 1 cut(s) | 240 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 136 |
| PfeI | GAWTC | 2 cut(s) | 64, 653 |
| PkrI | GCNGC | 2 cut(s) | 150, 288 |
| PleI | GAGTC | 1 cut(s) | 71 |
| PmaCI | CACGTG | 1 cut(s) | 683 |
| PmlI | CACGTG | 1 cut(s) | 683 |
| PpsI | GAGTC | 1 cut(s) | 71 |
| Ppu21I | YACGTR | 1 cut(s) | 683 |
| PsiI | TTATAA | 1 cut(s) | 738 |
| Psp1406I | AACGTT | 1 cut(s) | 583 |
| PspCI | CACGTG | 1 cut(s) | 683 |
| PspN4I | GGNNCC | 1 cut(s) | 545 |
| PspPI | GGNCC | 1 cut(s) | 544 |
| RseI | CAYNNNNRTG | 1 cut(s) | 648 |
| SapI | GCTCTTC | 1 cut(s) | 240 |
| SaqAI | TTAA | 6 cut(s) | 183, 390, 578, 605, 662, 698 |
| SatI | GCNGC | 2 cut(s) | 149, 287 |
| Sau3AI | GATC | 1 cut(s) | 436 |
| Sau96I | GGNCC | 1 cut(s) | 544 |
| SchI | GAGTC | 1 cut(s) | 71 |
| SduI | GDGCHC | 1 cut(s) | 682 |
| SetI | ASST | 7 cut(s) | 133, 264, 534, 586, 626, 685, 714 |
| SfaNI | GCATC | 2 cut(s) | 82, 160 |
| SinI | GGWCC | 1 cut(s) | 544 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 648 |
| Sse9I | AATT | 7 cut(s) | 5, 46, 81, 157, 384, 430, 558 |
| SsiI | CCGC | 5 cut(s) | 148, 253, 287, 362, 547 |
| SspMI | CTAG | 2 cut(s) | 317, 359 |
| StyI | CCWWGG | 1 cut(s) | 630 |
| TaaI | ACNGT | 1 cut(s) | 743 |
| TaiI | ACGT | 4 cut(s) | 133, 264, 586, 685 |
| TasI | AATT | 7 cut(s) | 5, 46, 81, 157, 384, 430, 558 |
| TauI | GCSGC | 2 cut(s) | 151, 289 |
| TfiI | GAWTC | 2 cut(s) | 64, 653 |
| Tru1I | TTAA | 6 cut(s) | 183, 390, 578, 605, 662, 698 |
| Tru9I | TTAA | 6 cut(s) | 183, 390, 578, 605, 662, 698 |
| TspDTI | ATGAA | 3 cut(s) | 17, 66, 308 |
| TspGWI | ACGGA | 1 cut(s) | 585 |
| VneI | GTGCAC | 1 cut(s) | 678 |
| VpaK11BI | GGWCC | 1 cut(s) | 544 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 217 |
| XspI | CTAG | 2 cut(s) | 317, 359 |