protein ubiquitination
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1038 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 192 |
| AciI | CCGC | 3 cut(s) | 240, 251, 463 |
| AclWI | GGATC | 1 cut(s) | 438 |
| AcsI | RAATTY | 2 cut(s) | 327, 336 |
| AcuI | CTGAAG | 2 cut(s) | 123, 375 |
| AcvI | CACGTG | 1 cut(s) | 983 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 192, 264, 474, 475, 749, 926 |
| AflII | CTTAAG | 1 cut(s) | 806 |
| AflIII | ACRYGT | 2 cut(s) | 980, 982 |
| AgsI | TTSAA | 3 cut(s) | 316, 416, 827 |
| AjiI | CACGTC | 2 cut(s) | 409, 577 |
| AluBI | AGCT | 8 cut(s) | 75, 179, 351, 555, 832, 856, 945, 1012 |
| AluI | AGCT | 8 cut(s) | 75, 179, 351, 555, 832, 856, 945, 1012 |
| Alw21I | GWGCWC | 2 cut(s) | 69, 353 |
| Alw26I | GTCTC | 3 cut(s) | 568, 608, 933 |
| AlwI | GGATC | 1 cut(s) | 438 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 11 |
| AoxI | GGCC | 1 cut(s) | 465 |
| ApaI | GGGCCC | 1 cut(s) | 469 |
| ApeKI | GCWGC | 2 cut(s) | 5, 515 |
| ApoI | RAATTY | 2 cut(s) | 327, 336 |
| AspLEI | GCGC | 2 cut(s) | 543, 851 |
| AspS9I | GGNCC | 2 cut(s) | 465, 466 |
| AsuC2I | CCSGG | 2 cut(s) | 469, 998 |
| AsuHPI | GGTGA | 2 cut(s) | 94, 962 |
| BaeGI | GKGCMC | 1 cut(s) | 469 |
| BanII | GRGCYC | 2 cut(s) | 353, 469 |
| BbrPI | CACGTG | 1 cut(s) | 983 |
| Bbv12I | GWGCWC | 2 cut(s) | 69, 353 |
| BbvI | GCAGC | 2 cut(s) | 17, 527 |
| BccI | CCATC | 3 cut(s) | 91, 419, 562 |
| BceAI | ACGGC | 4 cut(s) | 131, 561, 666, 862 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1118, 1152 |
| BcnI | CCSGG | 2 cut(s) | 469, 998 |
| BcoDI | GTCTC | 3 cut(s) | 568, 608, 933 |
| BfaI | CTAG | 5 cut(s) | 21, 306, 497, 632, 936 |
| BfmI | CTRYAG | 3 cut(s) | 12, 908, 1086 |
| BfoI | RGCGCY | 1 cut(s) | 852 |
| BfrI | CTTAAG | 1 cut(s) | 806 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 538 |
| BisI | GCNGC | 2 cut(s) | 6, 516 |
| BlpI | GCTNAGC | 1 cut(s) | 852 |
| BlsI | GCNGC | 2 cut(s) | 7, 517 |
| Bme1390I | CCNGG | 2 cut(s) | 469, 998 |
| BmgBI | CACGTC | 2 cut(s) | 409, 577 |
| BmgT120I | GGNCC | 2 cut(s) | 465, 466 |
| BmiI | GGNNCC | 1 cut(s) | 467 |
| BmrFI | CCNGG | 2 cut(s) | 469, 998 |
| BmsI | GCATC | 4 cut(s) | 238, 277, 628, 1138 |
| BpmI | CTGGAG | 1 cut(s) | 91 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 852 |
| BpuMI | CCSGG | 2 cut(s) | 469, 998 |
| BsaAI | YACGTR | 1 cut(s) | 983 |
| BsaBI | GATNNNNATC | 1 cut(s) | 429 |
| BsaJI | CCNNGG | 3 cut(s) | 124, 186, 748 |
| BsaWI | WCCGGW | 1 cut(s) | 947 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 192, 264, 474, 475, 749, 926 |
| Bse1I | ACTGG | 1 cut(s) | 74 |
| Bse3DI | GCAATG | 1 cut(s) | 930 |
| Bse8I | GATNNNNATC | 1 cut(s) | 429 |
| BseDI | CCNNGG | 3 cut(s) | 124, 186, 748 |
| BseGI | GGATG | 2 cut(s) | 253, 1006 |
| BseJI | GATNNNNATC | 1 cut(s) | 429 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 192, 264, 474, 475, 749, 926 |
| BseMI | GCAATG | 1 cut(s) | 930 |
| BseMII | CTCAG | 3 cut(s) | 687, 843, 863 |
| BseNI | ACTGG | 1 cut(s) | 74 |
| BseRI | GAGGAG | 1 cut(s) | 853 |
| BseSI | GKGCMC | 1 cut(s) | 469 |
| BseXI | GCAGC | 2 cut(s) | 17, 527 |
| Bsh1285I | CGRYCG | 1 cut(s) | 402 |
| BshFI | GGCC | 1 cut(s) | 467 |
| BsiEI | CGRYCG | 1 cut(s) | 402 |
| BsiHKAI | GWGCWC | 2 cut(s) | 69, 353 |
| BsiSI | CCGG | 3 cut(s) | 469, 948, 997 |
| BslFI | GGGAC | 3 cut(s) | 2, 128, 857 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 192, 264, 474, 475, 749, 926 |
| BsmAI | GTCTC | 3 cut(s) | 568, 608, 933 |
| BsmFI | GGGAC | 3 cut(s) | 2, 128, 857 |
| BsnI | GGCC | 1 cut(s) | 467 |
| Bsp120I | GGGCCC | 1 cut(s) | 465 |
| Bsp1286I | GDGCHC | 3 cut(s) | 69, 353, 469 |
| Bsp143I | GATC | 3 cut(s) | 430, 684, 1111 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 852 |
| BspACI | CCGC | 3 cut(s) | 240, 251, 463 |
| BspANI | GGCC | 1 cut(s) | 467 |
| BspCNI | CTCAG | 3 cut(s) | 686, 844, 864 |
| BspLI | GGNNCC | 1 cut(s) | 467 |
| BspPI | GGATC | 1 cut(s) | 438 |
| BspTI | CTTAAG | 1 cut(s) | 806 |
| BsrDI | GCAATG | 1 cut(s) | 930 |
| BsrI | ACTGG | 1 cut(s) | 74 |
| BssECI | CCNNGG | 3 cut(s) | 124, 186, 748 |
| BssMI | GATC | 3 cut(s) | 430, 684, 1111 |
| BssT1I | CCWWGG | 2 cut(s) | 124, 186 |
| Bst4CI | ACNGT | 1 cut(s) | 13 |
| Bst6I | CTCTTC | 1 cut(s) | 1098 |
| BstAFI | CTTAAG | 1 cut(s) | 806 |
| BstBAI | YACGTR | 1 cut(s) | 983 |
| BstC8I | GCNNGC | 5 cut(s) | 222, 465, 534, 777, 1010 |
| BstDEI | CTNAG | 4 cut(s) | 551, 673, 852, 872 |
| BstDSI | CCRYGG | 1 cut(s) | 748 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 262 |
| BstF5I | GGATG | 2 cut(s) | 253, 1006 |
| BstH2I | RGCGCY | 1 cut(s) | 852 |
| BstHHI | GCGC | 2 cut(s) | 543, 851 |
| BstKTI | GATC | 3 cut(s) | 433, 687, 1114 |
| BstMAI | GTCTC | 3 cut(s) | 568, 608, 933 |
| BstMBI | GATC | 3 cut(s) | 430, 684, 1111 |
| BstMCI | CGRYCG | 1 cut(s) | 402 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 221, 287, 469, 538, 776 |
| BstNSI | RCATGY | 2 cut(s) | 224, 779 |
| BstSCI | CCNGG | 2 cut(s) | 467, 996 |
| BstSFI | CTRYAG | 3 cut(s) | 12, 908, 1086 |
| BstSLI | GKGCMC | 1 cut(s) | 469 |
| BstV1I | GCAGC | 2 cut(s) | 17, 527 |
| BsuRI | GGCC | 1 cut(s) | 467 |
| BtgI | CCRYGG | 1 cut(s) | 748 |
| BtgZI | GCGATG | 1 cut(s) | 651 |
| BtrI | CACGTC | 2 cut(s) | 409, 577 |
| BtsCI | GGATG | 2 cut(s) | 253, 1006 |
| BtsIMutI | CAGTG | 2 cut(s) | 9, 67 |
| Cac8I | GCNNGC | 5 cut(s) | 222, 465, 534, 777, 1010 |
| CaiI | CAGNNNCTG | 1 cut(s) | 11 |
| CfoI | GCGC | 2 cut(s) | 543, 851 |
| Cfr13I | GGNCC | 2 cut(s) | 465, 466 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 218, 253, 747, 782 |
| CviAII | CATG | 3 cut(s) | 221, 737, 776 |
| DdeI | CTNAG | 4 cut(s) | 551, 673, 852, 872 |
| DpnI | GATC | 3 cut(s) | 432, 686, 1113 |
| DpnII | GATC | 3 cut(s) | 430, 684, 1111 |
| Eam1104I | CTCTTC | 1 cut(s) | 1098 |
| EarI | CTCTTC | 1 cut(s) | 1098 |
| Ecl136II | GAGCTC | 1 cut(s) | 351 |
| Eco130I | CCWWGG | 2 cut(s) | 124, 186 |
| Eco24I | GRGCYC | 2 cut(s) | 353, 469 |
| Eco53kI | GAGCTC | 1 cut(s) | 351 |
| Eco57I | CTGAAG | 2 cut(s) | 123, 375 |
| Eco72I | CACGTG | 1 cut(s) | 983 |
| EcoICRI | GAGCTC | 1 cut(s) | 351 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 262 |
| EcoT14I | CCWWGG | 2 cut(s) | 124, 186 |
| EcoT38I | GRGCYC | 2 cut(s) | 353, 469 |
| ErhI | CCWWGG | 2 cut(s) | 124, 186 |
| FaeI | CATG | 3 cut(s) | 224, 740, 779 |
| FaqI | GGGAC | 3 cut(s) | 2, 128, 857 |
| FatI | CATG | 3 cut(s) | 220, 736, 775 |
| FauI | CCCGC | 2 cut(s) | 233, 456 |
| Fnu4HI | GCNGC | 2 cut(s) | 6, 516 |
| FokI | GGATG | 2 cut(s) | 260, 1013 |
| FriOI | GRGCYC | 2 cut(s) | 353, 469 |
| Fsp4HI | GCNGC | 2 cut(s) | 6, 516 |
| FspBI | CTAG | 5 cut(s) | 21, 306, 497, 632, 936 |
| GlaI | GCGC | 2 cut(s) | 542, 850 |
| GluI | GCNGC | 2 cut(s) | 6, 516 |
| GsuI | CTGGAG | 1 cut(s) | 91 |
| HaeII | RGCGCY | 1 cut(s) | 852 |
| HaeIII | GGCC | 1 cut(s) | 467 |
| HapII | CCGG | 3 cut(s) | 469, 948, 997 |
| HhaI | GCGC | 2 cut(s) | 543, 851 |
| Hin1II | CATG | 3 cut(s) | 224, 740, 779 |
| Hin6I | GCGC | 2 cut(s) | 541, 849 |
| HinP1I | GCGC | 2 cut(s) | 541, 849 |
| HincII | GTYRAC | 1 cut(s) | 361 |
| HindII | GTYRAC | 1 cut(s) | 361 |
| HinfI | GANTC | 4 cut(s) | 254, 380, 671, 953 |
| HpaII | CCGG | 3 cut(s) | 469, 948, 997 |
| HphI | GGTGA | 2 cut(s) | 94, 962 |
| Hpy166II | GTNNAC | 2 cut(s) | 361, 799 |
| Hpy188I | TCNGA | 7 cut(s) | 334, 355, 435, 676, 873, 1016, 1125 |
| Hpy188III | TCNNGA | 3 cut(s) | 274, 509, 565 |
| Hpy8I | GTNNAC | 2 cut(s) | 361, 799 |
| Hpy99I | CGWCG | 1 cut(s) | 380 |
| HpyAV | CCTTC | 4 cut(s) | 98, 271, 575, 740 |
| HpyCH4III | ACNGT | 1 cut(s) | 13 |
| HpyCH4IV | ACGT | 4 cut(s) | 117, 408, 576, 982 |
| HpyCH4V | TGCA | 4 cut(s) | 220, 443, 702, 775 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 221, 287, 469, 538, 776 |
| HpyF3I | CTNAG | 4 cut(s) | 551, 673, 852, 872 |
| HpySE526I | ACGT | 4 cut(s) | 117, 408, 576, 982 |
| Hsp92II | CATG | 3 cut(s) | 224, 740, 779 |
| HspAI | GCGC | 2 cut(s) | 541, 849 |
| Kzo9I | GATC | 3 cut(s) | 430, 684, 1111 |
| LmnI | GCTCC | 2 cut(s) | 72, 950 |
| LpnPI | CCDG | 8 cut(s) | 55, 327, 482, 522, 546, 961, 1010, 1022 |
| Lsp1109I | GCAGC | 2 cut(s) | 17, 527 |
| LweI | GCATC | 4 cut(s) | 238, 277, 628, 1138 |
| MaeI | CTAG | 5 cut(s) | 21, 306, 497, 632, 936 |
| MaeII | ACGT | 4 cut(s) | 117, 408, 576, 982 |
| MaeIII | GTNAC | 2 cut(s) | 668, 814 |
| MalI | GATC | 3 cut(s) | 432, 686, 1113 |
| MboI | GATC | 3 cut(s) | 430, 684, 1111 |
| MboII | GAAGA | 4 cut(s) | 185, 442, 724, 1115 |
| MfeI | CAATTG | 1 cut(s) | 968 |
| MhlI | GDGCHC | 3 cut(s) | 69, 353, 469 |
| MluCI | AATT | 7 cut(s) | 49, 299, 327, 336, 690, 902, 968 |
| MlyI | GAGTC | 3 cut(s) | 263, 374, 665 |
| MmeI | TCCRAC | 1 cut(s) | 879 |
| MseI | TTAA | 6 cut(s) | 33, 39, 696, 708, 807, 1150 |
| MspCI | CTTAAG | 1 cut(s) | 806 |
| MspI | CCGG | 3 cut(s) | 469, 948, 997 |
| MspR9I | CCNGG | 2 cut(s) | 469, 998 |
| MunI | CAATTG | 1 cut(s) | 968 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 221, 287, 469, 538, 776 |
| NciI | CCSGG | 2 cut(s) | 469, 998 |
| NdeII | GATC | 3 cut(s) | 430, 684, 1111 |
| NlaIII | CATG | 3 cut(s) | 224, 740, 779 |
| NlaIV | GGNNCC | 1 cut(s) | 467 |
| NmuCI | GTSAC | 1 cut(s) | 668 |
| NspI | RCATGY | 2 cut(s) | 224, 779 |
| PaeI | GCATGC | 2 cut(s) | 224, 779 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 144, 168 |
| PfeI | GAWTC | 1 cut(s) | 953 |
| PflFI | GACNNNGTC | 1 cut(s) | 119 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 192 |
| PfoI | TCCNGGA | 1 cut(s) | 996 |
| PkrI | GCNGC | 2 cut(s) | 7, 517 |
| PleI | GAGTC | 3 cut(s) | 262, 374, 665 |
| PmaCI | CACGTG | 1 cut(s) | 983 |
| PmlI | CACGTG | 1 cut(s) | 983 |
| PpsI | GAGTC | 3 cut(s) | 262, 374, 665 |
| Ppu21I | YACGTR | 1 cut(s) | 983 |
| PsiI | TTATAA | 1 cut(s) | 1038 |
| Psp124BI | GAGCTC | 1 cut(s) | 353 |
| PspCI | CACGTG | 1 cut(s) | 983 |
| PspN4I | GGNNCC | 1 cut(s) | 467 |
| PspOMI | GGGCCC | 1 cut(s) | 465 |
| PspPI | GGNCC | 2 cut(s) | 465, 466 |
| PstNI | CAGNNNCTG | 1 cut(s) | 11 |
| PsyI | GACNNNGTC | 1 cut(s) | 119 |
| SacI | GAGCTC | 1 cut(s) | 353 |
| SaqAI | TTAA | 6 cut(s) | 33, 39, 696, 708, 807, 1150 |
| SatI | GCNGC | 2 cut(s) | 6, 516 |
| Sau3AI | GATC | 3 cut(s) | 430, 684, 1111 |
| Sau96I | GGNCC | 2 cut(s) | 465, 466 |
| SchI | GAGTC | 3 cut(s) | 263, 374, 665 |
| ScrFI | CCNGG | 2 cut(s) | 469, 998 |
| SduI | GDGCHC | 3 cut(s) | 69, 353, 469 |
| SfaNI | GCATC | 4 cut(s) | 238, 277, 628, 1138 |
| SfcI | CTRYAG | 3 cut(s) | 12, 908, 1086 |
| SmlI | CTYRAG | 1 cut(s) | 806 |
| SmoI | CTYRAG | 1 cut(s) | 806 |
| SphI | GCATGC | 2 cut(s) | 224, 779 |
| Sse9I | AATT | 7 cut(s) | 49, 299, 327, 336, 690, 902, 968 |
| SsiI | CCGC | 3 cut(s) | 240, 251, 463 |
| SspMI | CTAG | 5 cut(s) | 21, 306, 497, 632, 936 |
| SstI | GAGCTC | 1 cut(s) | 353 |
| StyD4I | CCNGG | 2 cut(s) | 467, 996 |
| StyI | CCWWGG | 2 cut(s) | 124, 186 |
| TaaI | ACNGT | 1 cut(s) | 13 |
| TaiI | ACGT | 4 cut(s) | 120, 411, 579, 985 |
| TaqI | TCGA | 4 cut(s) | 273, 566, 687, 888 |
| TaqII | GACCGA | 1 cut(s) | 388 |
| TasI | AATT | 7 cut(s) | 49, 299, 327, 336, 690, 902, 968 |
| TfiI | GAWTC | 1 cut(s) | 953 |
| Tru1I | TTAA | 6 cut(s) | 33, 39, 696, 708, 807, 1150 |
| Tru9I | TTAA | 6 cut(s) | 33, 39, 696, 708, 807, 1150 |
| TscAI | CASTG | 2 cut(s) | 16, 74 |
| TseFI | GTSAC | 1 cut(s) | 668 |
| TseI | GCWGC | 2 cut(s) | 5, 515 |
| Tsp45I | GTSAC | 1 cut(s) | 668 |
| TspDTI | ATGAA | 3 cut(s) | 312, 623, 1085 |
| TspRI | CASTG | 2 cut(s) | 16, 74 |
| Tth111I | GACNNNGTC | 1 cut(s) | 119 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 192 |
| Vha464I | CTTAAG | 1 cut(s) | 806 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 262 |
| XapI | RAATTY | 2 cut(s) | 327, 336 |
| XceI | RCATGY | 2 cut(s) | 224, 779 |
| XspI | CTAG | 5 cut(s) | 21, 306, 497, 632, 936 |