FvH4_6g51440

Domain of unknown function

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000027
Physical Location & Seq
Reverse (-)
38139145 .. 38142958
3814 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g51440.t1

Sequence Viewer

Length: 1308 bp
ATGAAGAACGCCAAGGCTCTTCATGCAATCCAGAATTCTTGTAGGGCTGATGTCTTCGGTTTTATCCGTGGCACTAGGTCGGCCAAGGATGCGTGGGAGACTTTGGCAAAACGGTTGAAGCTGAAAAACAGAGAATATGTAGATATCGTGGGCATGGCAGCCACACTAGTCCCTAGTGCAATGATCAATCTTAAGCCACTTAACAAAGACAACTACGAGCACTGGAGCTTTTGGGTGAGAAAATACTTGCTGGCTGAAGATTTGTGGGACGTTGTCCAAGGCACAAGTGAACCTCAAAAACCAGAAGACGGGGAAGGGGAAGCTGAATTCATGGCTTGGCGGAAAAATAATGCCAGGGCATTGCATGTTATCACCATATTTTCCGGGCAGGATGCTCAGTCTTGTATTAGTGACAGTGAGATGGCGAAAGATGCCTGGAATACTTTGGCAGAAAAGTTCAATCCTCCTCAAATTTTAGAAACTCCAGAAGAGGATTCTCAAGTTGACTTGAGTGACGACAGCAACTCAAATGAAGGTGATGCCGATTCGGAAATAGTAGAGTATCAAGGGAAGTTGTCCCCATTAACACAGATTGCTCATGTTCGAGGTGCAGCTTTGCAAATGCAGTATGAACTACAATGGTTCAAGAAGGTGGAGCGCATGGCAAGTCACAAAGATCTTAATTGTATAAATTCTGATGGTCTCACACCCCGTGAGGTATTTACTATAAACCACAGAGATCTGGTGAAGGAAGGAGAAATGTCAATGAAAGAAACTGCAACTTCTTCTTCAGCACTTGTAGCTGCTCTTATCATTACCGTTATGTTCGCAGCAGTAGTGACAGTTCCTGGTAGAATTAATGGAGAAACTGGTATTCCCATATACTTAAACACCGATGCATTCAGGATTTTTATAATTGCAGATGTTATATCCCTATGCTCTTCCACAACTTCAGTAATGGTGTTCTTGGGGATCCTCACTTCACGTTTTGCTGAAGAAGATTTTCTCACATCCTTACCAACAAAATTGATAATTGGCTTTTTATCCCTTTTTCTATCTATCGGGTCCATGATGGTTGCCTTTGCTTCTGCCGTTTTCATTATGCTCCCAGGAAGACCATCAATTGTGATTCCATCTATTGTACTCGCTGGTGTTCCAATTGCTTCATTCCTATGGATGCAATTTTCATTCCTTCTTGAGATCATTATATCTACTTATGGATTGAGTTTTCGCTCAATGTACTGGAGGCTTAAGCGGTGGGCTTGGACGCTTAAGCGGTGGGCTCGGAGGATTTACAGGAGGTTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank_2 PGG

Protein Analysis

436

Amino Acids

49.03

Weight (kDa)

6.15

Isoelectric Point (pI)

34.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Retrotran_gag_2 PF14223 80 - 154 9.1e-08 gag-polypeptide of LTR copia-type
PGG PF13962 258 - 367 1.5e-21 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000027)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G18670 AT3G18670 AT3G54065
fragaria_vesca FvH4_1g26570 FvH4_1g26570 FvH4_5g19270 FvH4_5g19273 FvH4_5g35840 FvH4_5g36340 FvH4_5g36630 FvH4_5g37181 FvH4_5g37182 FvH4_5g37185 FvH4_5g37240 FvH4_5g37260 FvH4_6g21440 FvH4_6g44571 FvH4_6g44572 FvH4_6g44610 FvH4_6g44620 FvH4_6g44650 FvH4_6g44660 FvH4_6g45151 FvH4_6g45152 FvH4_6g45152 FvH4_6g45153 FvH4_6g45153 FvH4_6g45153 FvH4_6g45153 FvH4_6g45153 FvH4_6g45154 FvH4_6g51440 FvH4_7g08090 FvH4_7g08090 FvH4_7g08090 FvH4_7g08090 FvH4_7g08090 FvH4_7g08090
malus_domestica MD00G1010300.v1.1 MD00G1010400.v1.1 MD00G1010500.v1.1 MD00G1011000.v1.1 MD00G1011200.v1.1 MD00G1011500.v1.1 MD00G1011900.v1.1 MD03G1133900.v1.1 MD03G1134100.v1.1 MD09G1086300.v1.1 MD09G1086500.v1.1 MD09G1086900.v1.1 MD09G1087000.v1.1 MD09G1088000.v1.1 MD09G1088100.v1.1 MD09G1088200.v1.1 MD09G1088300.v1.1 MD09G1089000.v1.1 MD09G1089300.v1.1 MD09G1133800.v1.1 MD16G1219400.v1.1 MD17G1027900.v1.1 MD17G1028400.v1.1 MD17G1028600.v1.1 MD17G1028700.v1.1 MD17G1028900.v1.1 MD17G1029000.v1.1 MD17G1029100.v1.1 MD17G1029200.v1.1 MD17G1075400.v1.1 MD17G1076000.v1.1 MD17G1077000.v1.1 MD17G1077100.v1.1 MD17G1077800.v1.1 MD17G1078000.v1.1 MD17G1078100.v1.1 MD17G1078300.v1.1 MD17G1100900.v1.1 MD17G1101100.v1.1 MD17G1101400.v1.1 MD17G1104200.v1.1 MD17G1104500.v1.1 MD17G1121300.v1.1 MD17G1121600.v1.1 MD17G1121900.v1.1 MD17G1122700.v1.1 MD17G1218800.v1.1
prunus_persica Prupe.2G033800_v2.0.a1 Prupe.2G033900_v2.0.a1 Prupe.2G080300_v2.0.a1 Prupe.2G080700_v2.0.a1 Prupe.2G080900_v2.0.a1 Prupe.2G081100_v2.0.a1 Prupe.2G081100_v2.0.a1 Prupe.2G081200_v2.0.a1 Prupe.2G081200_v2.0.a1 Prupe.2G081200_v2.0.a1 Prupe.2G081200_v2.0.a1 Prupe.2G081700_v2.0.a1 Prupe.2G081700_v2.0.a1 Prupe.2G082000_v2.0.a1 Prupe.2G082100_v2.0.a1 Prupe.2G082100_v2.0.a1 Prupe.2G082200_v2.0.a1 Prupe.2G082300_v2.0.a1 Prupe.2G082700_v2.0.a1 Prupe.2G082800_v2.0.a1 Prupe.2G082900_v2.0.a1 Prupe.3G235600_v2.0.a1 Prupe.3G236300_v2.0.a1 Prupe.3G236300_v2.0.a1 Prupe.3G236600_v2.0.a1 Prupe.3G236600_v2.0.a1 Prupe.3G236800_v2.0.a1 Prupe.3G237000_v2.0.a1 Prupe.3G237100_v2.0.a1 Prupe.3G237300_v2.0.a1 Prupe.3G237400_v2.0.a1 Prupe.3G237500_v2.0.a1 Prupe.3G237500_v2.0.a1 Prupe.3G237500_v2.0.a1 Prupe.4G282500_v2.0.a1 Prupe.4G282500_v2.0.a1
pyrus_communis pycom03g08990 pycom03g09000 pycom09g01180 pycom09g01190 pycom09g01220 pycom09g01230 pycom09g01360 pycom09g01370 pycom09g01380 pycom09g01410 pycom09g05500 pycom11g10280 pycom11g10290 pycom11g10310 pycom16g18270 pycom16g18280 pycom17g02280 pycom17g02290 pycom17g02300 pycom17g02360 pycom17g02390 pycom17g02410 pycom17g02440 pycom17g02460 pycom17g02470 pycom17g02480 pycom17g02510 pycom17g02530 pycom17g02540 pycom17g02550 pycom17g02560 pycom17g02570 pycom17g02580 pycom17g02630 pycom17g02640 pycom17g04970 pycom17g04980 pycom17g05010 pycom17g07090 pycom17g07620 pycom17g07630 pycom17g07640 pycom17g07650 pycom17g07660 pycom17g07740 pycom17g07760 pycom17g07770 pycom17g09580 pycom17g11170 pycom17g11200 pycom17g11220 pycom17g11240 pycom17g11250 pycom17g11300 pycom17g11340 pycom17g11380 pycom17g11440
rosa_chinensis RchiOBHm_Chr1g0332901 RchiOBHm_Chr1g0338981 RchiOBHm_Chr1g0338991 RchiOBHm_Chr1g0341201 RchiOBHm_Chr1g0341211 RchiOBHm_Chr1g0342721 RchiOBHm_Chr1g0343191 RchiOBHm_Chr2g0146761 RchiOBHm_Chr2g0161791 RchiOBHm_Chr2g0161801 RchiOBHm_Chr2g0161841 RchiOBHm_Chr2g0162041 RchiOBHm_Chr2g0162651 RchiOBHm_Chr2g0162691 RchiOBHm_Chr2g0162701 RchiOBHm_Chr2g0162711 RchiOBHm_Chr2g0162721 RchiOBHm_Chr2g0162811 RchiOBHm_Chr2g0162831 RchiOBHm_Chr2g0162841 RchiOBHm_Chr4g0416381 RchiOBHm_Chr4g0416391 RchiOBHm_Chr5g0075981 RchiOBHm_Chr6g0276101 RchiOBHm_Chr7g0214581 RchiOBHm_Chr7g0214631 RchiOBHm_Chr7g0214651 RchiOBHm_Chr7g0214721 RchiOBHm_Chr7g0223161 RchiOBHm_Chr7g0230661 RchiOBHm_Chr7g0230751 RchiOBHm_Chr7g0230781 RchiOBHm_Chr7g0234581 RchiOBHm_Chr7g0234601 RchiOBHm_Chr7g0237561 RchiOBHm_Chr7g0237571 RchiOBHm_Chr7g0238781 RchiOBHm_Chr7g0238811 RchiOBHm_Chr7g0242161 RchiOBHm_Chr7g0242401 RchiOBHm_Chr7g0242451 RchiOBHm_Chr7g0242921 RchiOBHm_Chr7g0242981 RchiOBHm_Chr7g0243111 RchiOBHm_Chr7g0243251 RchiOBHm_Chr7g0243331
rosa_laevigata RLG00000000803 RLG00000000807 RLG00000000809 RLG00000000811 RLG00000000814 RLG00000000854 RLG00000000859 RLG00000000864 RLG00000000994 RLG00000000995 RLG00000001458 RLG00000001461 RLG00000001474 RLG00000001476 RLG00000002729 RLG00000002730 RLG00000003505 RLG00000008871 RLG00000008873 RLG00000018513 RLG00000021300 RLG00000021303 RLG00000021318 RLG00000021356 RLG00000021357 RLG00000029070 RLG00000029071 RLG00000029171 RLG00000029189 RLG00000029190 RLG00000029640 RLG00000034635
rosa_multiflora Rmu_co8149086.1_g000001 Rmu_co8460577.1_g000001 Rmu_sc0000429.1_g000062 Rmu_sc0000429.1_g000071 Rmu_sc0000429.1_g000081 Rmu_sc0000863.1_g000020 Rmu_sc0001488.1_g000011 Rmu_sc0001545.1_g000007 Rmu_sc0001849.1_g000068 Rmu_sc0001993.1_g000003 Rmu_sc0002222.1_g000002 Rmu_sc0002308.1_g000053 Rmu_sc0002308.1_g000069 Rmu_sc0002480.1_g000007 Rmu_sc0003179.1_g000041 Rmu_sc0004213.1_g000011 Rmu_sc0007101.1_g000012 Rmu_sc0008565.1_g000011 Rmu_sc0009298.1_g000003 Rmu_sc0010407.1_g000009 Rmu_sc0010407.1_g000013 Rmu_sc0026966.1_g000004 Rmu_ssc0000152.1_g000012 Rmu_ssc0000152.1_g000014 Rmu_ssc0000295.1_g000021 Rmu_ssc0000295.1_g000026
rosa_roxburghii Rroxscaffold_1G00029600 Rroxscaffold_2G00087790 Rroxscaffold_2G00087800 Rroxscaffold_2G00088360 Rroxscaffold_2G00088500 Rroxscaffold_2G00088530 Rroxscaffold_2G00088590 Rroxscaffold_3G00221570 Rroxscaffold_3G00222190 Rroxscaffold_3G00222240 Rroxscaffold_3G00222880 Rroxscaffold_3G00222900 Rroxscaffold_3G00223990 Rroxscaffold_3G00229750 Rroxscaffold_3G00229760 Rroxscaffold_3G00245140 Rroxscaffold_3G00245150 Rroxscaffold_3G00245200 Rroxscaffold_3G00253520 Rroxscaffold_3G00253530 Rroxscaffold_4G00294500 Rroxscaffold_4G00311800 Rroxscaffold_4G00311830 Rroxscaffold_4G00311850 Rroxscaffold_4G00313180 Rroxscaffold_4G00313210 Rroxscaffold_4G00316270 Rroxscaffold_4G00317910 Rroxscaffold_4G00317920 Rroxscaffold_5G00349290 Rroxscaffold_5G00349300 Rroxscaffold_5G00349310 Rroxscaffold_5G00351950 Rroxscaffold_5G00351960 Rroxscaffold_5G00353390 Rroxscaffold_7G00192540
rosa_rugosa Rorug01G0102500 Rorug01G0102600 Rorug01G0146400.1 Rorug01G0146500.1 Rorug01G0159400.1 Rorug01G0159500.1 Rorug02G0491900 Rorug02G0492000 Rorug02G0492100 Rorug02G0492200 Rorug02G0492300 Rorug02G0492400 Rorug02G0492500 Rorug02G0492700 Rorug02G0498500 Rorug02G0498600 Rorug02G0498800 Rorug04G0006900 Rorug04G0053700 Rorug06G0002000 Rorug06G0002100 Rorug07G0304700 Rorug07G0304800 Rorug07G0304800 Rorug07G0304800 Rorug07G0305300 Rorug07G0305400 Rorug07G0305500 Rorug07G0305500 Rorug07G0318300 Rorug07G0318600 Rorug07G0323600
rosa_samantha Rh1AG128900 Rh1AG162500 Rh1AG163000 Rh1AG164000 Rh1AG164700 Rh1AG173200 Rh1AG173300 Rh1AG173800 Rh1BG098100 Rh1BG129800 Rh1BG130600 Rh1BG141300 Rh1BG141500 Rh1BG141600 Rh1CG122700 Rh1CG151900 Rh1CG152400 Rh1CG153100 Rh1CG153500 Rh1CG161400 Rh1CG161600 Rh1DG134200 Rh1DG173500 Rh1DG173700 Rh2AG558100 Rh2AG558500 Rh2AG560200 Rh2AG564700 Rh2AG564800 Rh2BG465600 Rh2BG571700 Rh2BG572000 Rh2BG573500 Rh2CG439800 Rh2CG541800 Rh2CG542100 Rh2CG542200 Rh2CG543800 Rh2CG547300 Rh2DG474700 Rh2DG580600 Rh2DG580900 Rh2DG581200 Rh2DG581700 Rh2DG581800 Rh2DG583500 Rh2DG587200 Rh2DG587300 Rh2DG587400 Rh4AG128900 Rh4AG203800 Rh4AG319900 Rh4AG320000 Rh4BG122200 Rh4BG201100 Rh4CG136000 Rh4DG122400 Rh4DG201100 Rh4DG323600 Rh6BG077000 Rh6DG206200 Rh7AG282300 Rh7AG282500 Rh7AG283400 Rh7AG358600 Rh7AG414500 Rh7AG415200 Rh7AG415500 Rh7AG461700 Rh7AG469300 Rh7AG477800 Rh7BG273900 Rh7BG274000 Rh7BG390400 Rh7BG390500 Rh7BG391500 Rh7BG391800 Rh7BG408300 Rh7BG432000 Rh7BG439200 Rh7BG449200 Rh7BG449900 Rh7BG450400 Rh7BG450500 Rh7CG220900 Rh7CG301600 Rh7CG302700 Rh7CG377000 Rh7CG433900 Rh7CG434200 Rh7CG478800 Rh7DG286200 Rh7DG354000 Rh7DG424600 Rh7DG448000 Rh7DG462800 Rh7DG462900
rosa_wichuraiana Rw0G003440 Rw0G011970 Rw0G017120 Rw0G017130 Rw0G017140 Rw0G018470 Rw0G018480 Rw0G020440 Rw1G010470 Rw2G046180 Rw2G046210 Rw2G046230 Rw2G046390 Rw2G046400 Rw2G046710 Rw2G046720 Rw2G046730 Rw3G025310 Rw4G010410 Rw4G017250 Rw6G018270 Rw7G018180 Rw7G024130 Rw7G024160 Rw7G024170 Rw7G034060 Rw7G034250 Rw7G034260 Rw7G034400 Rw7G034410 Rw7G038210 Rw7G039020 Rw7G039060 Rw7G039280 Rw7G039400 Rw7G039470 Rw7G039880 Rw7G039890

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 914
AciI CCGC 3 cut(s) 340, 1255, 1276
AclWI GGATC 2 cut(s) 967, 980
AcoI YGGCCR 1 cut(s) 81
AcsI RAATTY 4 cut(s) 34, 326, 471, 691
AcuI CTGAAG 4 cut(s) 276, 774, 936, 1014
AdeI CACNNNGTG 1 cut(s) 713
AfaI GTAC 2 cut(s) 1143, 1241
AfiI CCNNNNNNNGG 1 cut(s) 308
AflII CTTAAG 3 cut(s) 191, 1250, 1271
AgsI TTSAA 3 cut(s) 118, 460, 646
AhlI ACTAGT 1 cut(s) 166
AjnI CCWGG 4 cut(s) 353, 434, 847, 1108
AluBI AGCT 5 cut(s) 121, 228, 323, 614, 803
AluI AGCT 5 cut(s) 121, 228, 323, 614, 803
Alw21I GWGCWC 1 cut(s) 222
Alw26I GTCTC 2 cut(s) 92, 707
AlwI GGATC 2 cut(s) 967, 980
AlwNI CAGNNNCTG 1 cut(s) 848
AoxI GGCC 1 cut(s) 81
ApeKI GCWGC 4 cut(s) 158, 611, 803, 830
ApoI RAATTY 4 cut(s) 34, 326, 471, 691
AseI ATTAAT 1 cut(s) 858
Asp700I GAANNNNTTC 1 cut(s) 1002
AspLEI GCGC 1 cut(s) 660
AspS9I GGNCC 1 cut(s) 1065
AsuC2I CCSGG 1 cut(s) 385
AsuHPI GGTGA 4 cut(s) 247, 364, 548, 757
AvaII GGWCC 1 cut(s) 1065
BamHI GGATCC 1 cut(s) 972
BanII GRGCYC 1 cut(s) 1285
BbsI GAAGAC 3 cut(s) 46, 312, 1120
Bbv12I GWGCWC 1 cut(s) 222
BbvI GCAGC 4 cut(s) 170, 623, 790, 842
BccI CCATC 5 cut(s) 415, 692, 1066, 1126, 1141
BceAI ACGGC 1 cut(s) 1076
BciT130I CCWGG 4 cut(s) 355, 436, 849, 1110
BclI TGATCA 1 cut(s) 183
BcnI CCSGG 1 cut(s) 385
BcoDI GTCTC 2 cut(s) 92, 707
BcuI ACTAGT 1 cut(s) 166
BfaI CTAG 3 cut(s) 75, 167, 174
BfrI CTTAAG 3 cut(s) 191, 1250, 1271
BglII AGATCT 2 cut(s) 676, 739
BisI GCNGC 4 cut(s) 159, 612, 804, 831
BlsI GCNGC 4 cut(s) 160, 613, 805, 832
Bme1390I CCNGG 5 cut(s) 355, 385, 436, 849, 1110
Bme18I GGWCC 1 cut(s) 1065
BmgT120I GGNCC 1 cut(s) 1065
BmiI GGNNCC 2 cut(s) 974, 1066
BmrFI CCNGG 5 cut(s) 355, 385, 436, 849, 1110
BmsI GCATC 6 cut(s) 79, 382, 421, 529, 886, 1167
BpiI GAAGAC 3 cut(s) 46, 312, 1120
BpmI CTGGAG 3 cut(s) 244, 468, 1264
BpuEI CTTGAG 3 cut(s) 483, 529, 1217
BpuMI CCSGG 1 cut(s) 385
BsaI GGTCTC 1 cut(s) 707
BsaJI CCNNGG 6 cut(s) 12, 67, 84, 277, 354, 1108
Bsc4I CCNNNNNNNGG 1 cut(s) 308
Bse1I ACTGG 3 cut(s) 227, 874, 1247
Bse3DI GCAATG 2 cut(s) 186, 359
BseBI CCWGG 4 cut(s) 355, 436, 849, 1110
BseDI CCNNGG 6 cut(s) 12, 67, 84, 277, 354, 1108
BseGI GGATG 4 cut(s) 94, 397, 1010, 1182
BseLI CCNNNNNNNGG 1 cut(s) 308
BseMI GCAATG 2 cut(s) 186, 359
BseMII CTCAG 1 cut(s) 410
BseNI ACTGG 3 cut(s) 227, 874, 1247
BseRI GAGGAG 1 cut(s) 456
BseXI GCAGC 4 cut(s) 170, 623, 790, 842
BsgI GTGCAG 1 cut(s) 630
BshFI GGCC 1 cut(s) 83
BsiHKAI GWGCWC 1 cut(s) 222
BsiSI CCGG 1 cut(s) 384
BslFI GGGAC 3 cut(s) 155, 281, 562
BslI CCNNNNNNNGG 1 cut(s) 308
BsmAI GTCTC 2 cut(s) 92, 707
BsmFI GGGAC 3 cut(s) 155, 281, 562
BsmI GAATGC 1 cut(s) 899
BsnI GGCC 1 cut(s) 83
Bso31I GGTCTC 1 cut(s) 707
Bsp1286I GDGCHC 2 cut(s) 222, 1285
Bsp143I GATC 5 cut(s) 183, 676, 739, 972, 1200
BspACI CCGC 3 cut(s) 340, 1255, 1276
BspANI GGCC 1 cut(s) 83
BspCNI CTCAG 1 cut(s) 409
BspLI GGNNCC 2 cut(s) 974, 1066
BspPI GGATC 2 cut(s) 967, 980
BspQI GCTCTTC 2 cut(s) 24, 946
BspTI CTTAAG 3 cut(s) 191, 1250, 1271
BspTNI GGTCTC 1 cut(s) 707
BsrDI GCAATG 2 cut(s) 186, 359
BsrI ACTGG 3 cut(s) 227, 874, 1247
BssECI CCNNGG 6 cut(s) 12, 67, 84, 277, 354, 1108
BssMI GATC 5 cut(s) 183, 676, 739, 972, 1200
BssT1I CCWWGG 3 cut(s) 12, 84, 277
Bst2UI CCWGG 4 cut(s) 355, 436, 849, 1110
Bst4CI ACNGT 4 cut(s) 114, 416, 820, 844
Bst6I CTCTTC 3 cut(s) 24, 483, 946
BstAFI CTTAAG 3 cut(s) 191, 1250, 1271
BstC8I GCNNGC 1 cut(s) 252
BstDEI CTNAG 1 cut(s) 396
BstDSI CCRYGG 1 cut(s) 67
BstF5I GGATG 4 cut(s) 94, 397, 1010, 1182
BstHHI GCGC 1 cut(s) 660
BstKTI GATC 5 cut(s) 186, 679, 742, 975, 1203
BstMAI GTCTC 2 cut(s) 92, 707
BstMBI GATC 5 cut(s) 183, 676, 739, 972, 1200
BstMWI GCNNNNNNNGC 4 cut(s) 23, 89, 431, 800
BstNI CCWGG 4 cut(s) 355, 436, 849, 1110
BstNSI RCATGY 1 cut(s) 368
BstSCI CCNGG 5 cut(s) 353, 383, 434, 847, 1108
BstV1I GCAGC 4 cut(s) 170, 623, 790, 842
BstV2I GAAGAC 3 cut(s) 46, 312, 1120
BstX2I RGATCY 3 cut(s) 676, 739, 972
BstYI RGATCY 3 cut(s) 676, 739, 972
BsuRI GGCC 1 cut(s) 83
BtgI CCRYGG 1 cut(s) 67
BtsCI GGATG 4 cut(s) 94, 397, 1010, 1182
BtsIMutI CAGTG 2 cut(s) 220, 421
Cac8I GCNNGC 1 cut(s) 252
CaiI CAGNNNCTG 1 cut(s) 848
CfoI GCGC 1 cut(s) 660
Cfr13I GGNCC 1 cut(s) 1065
CseI GACGC 1 cut(s) 1276
Csp6I GTAC 2 cut(s) 1142, 1240
CviAII CATG 7 cut(s) 23, 154, 331, 365, 599, 661, 1069
CviQI GTAC 2 cut(s) 1142, 1240
DdeI CTNAG 1 cut(s) 396
DpnI GATC 5 cut(s) 185, 678, 741, 974, 1202
DpnII GATC 5 cut(s) 183, 676, 739, 972, 1200
DraIII CACNNNGTG 1 cut(s) 713
EaeI YGGCCR 1 cut(s) 81
Eam1104I CTCTTC 3 cut(s) 24, 483, 946
EarI CTCTTC 3 cut(s) 24, 483, 946
EciI GGCGGA 1 cut(s) 355
Eco130I CCWWGG 3 cut(s) 12, 84, 277
Eco24I GRGCYC 1 cut(s) 1285
Eco31I GGTCTC 1 cut(s) 707
Eco32I GATATC 1 cut(s) 145
Eco47I GGWCC 1 cut(s) 1065
Eco57I CTGAAG 4 cut(s) 276, 774, 936, 1014
EcoRI GAATTC 2 cut(s) 34, 326
EcoRII CCWGG 4 cut(s) 353, 434, 847, 1108
EcoRV GATATC 1 cut(s) 145
EcoT14I CCWWGG 3 cut(s) 12, 84, 277
EcoT22I ATGCAT 1 cut(s) 901
EcoT38I GRGCYC 1 cut(s) 1285
ErhI CCWWGG 3 cut(s) 12, 84, 277
FaeI CATG 7 cut(s) 26, 157, 334, 368, 602, 664, 1072
FaqI GGGAC 3 cut(s) 155, 281, 562
FatI CATG 7 cut(s) 22, 153, 330, 364, 598, 660, 1068
FbaI TGATCA 1 cut(s) 183
Fnu4HI GCNGC 4 cut(s) 159, 612, 804, 831
FokI GGATG 4 cut(s) 101, 404, 997, 1189
FriOI GRGCYC 1 cut(s) 1285
Fsp4HI GCNGC 4 cut(s) 159, 612, 804, 831
FspBI CTAG 3 cut(s) 75, 167, 174
GlaI GCGC 1 cut(s) 659
GluI GCNGC 4 cut(s) 159, 612, 804, 831
GsuI CTGGAG 3 cut(s) 244, 468, 1264
HaeIII GGCC 1 cut(s) 83
HapII CCGG 1 cut(s) 384
HgaI GACGC 1 cut(s) 1276
HhaI GCGC 1 cut(s) 660
Hin1II CATG 7 cut(s) 26, 157, 334, 368, 602, 664, 1072
Hin6I GCGC 1 cut(s) 658
HinP1I GCGC 1 cut(s) 658
HincII GTYRAC 1 cut(s) 505
HindII GTYRAC 1 cut(s) 505
HinfI GANTC 3 cut(s) 494, 545, 1129
HpaII CCGG 1 cut(s) 384
HphI GGTGA 4 cut(s) 247, 364, 548, 757
Hpy166II GTNNAC 2 cut(s) 290, 505
Hpy188I TCNGA 3 cut(s) 550, 697, 1287
Hpy188III TCNNGA 5 cut(s) 31, 485, 646, 904, 1196
Hpy8I GTNNAC 2 cut(s) 290, 505
HpyAV CCTTC 6 cut(s) 308, 527, 643, 742, 746, 1202
HpyCH4III ACNGT 4 cut(s) 114, 416, 820, 844
HpyCH4IV ACGT 2 cut(s) 270, 985
HpyF10VI GCNNNNNNNGC 4 cut(s) 23, 89, 431, 800
HpyF3I CTNAG 1 cut(s) 396
HpySE526I ACGT 2 cut(s) 270, 985
Hsp92II CATG 7 cut(s) 26, 157, 334, 368, 602, 664, 1072
HspAI GCGC 1 cut(s) 658
Ksp22I TGATCA 1 cut(s) 183
Kzo9I GATC 5 cut(s) 183, 676, 739, 972, 1200
LguI GCTCTTC 2 cut(s) 24, 946
LmnI GCTCC 3 cut(s) 225, 655, 1110
Lsp1109I GCAGC 4 cut(s) 170, 623, 790, 842
LweI GCATC 6 cut(s) 79, 382, 421, 529, 886, 1167
MaeI CTAG 3 cut(s) 75, 167, 174
MaeII ACGT 2 cut(s) 270, 985
MaeIII GTNAC 4 cut(s) 410, 512, 668, 838
MalI GATC 5 cut(s) 185, 678, 741, 974, 1202
MboI GATC 5 cut(s) 183, 676, 739, 972, 1200
MfeI CAATTG 2 cut(s) 1122, 1158
MflI RGATCY 3 cut(s) 676, 739, 972
MhlI GDGCHC 2 cut(s) 222, 1285
Mph1103I ATGCAT 1 cut(s) 901
MroXI GAANNNNTTC 1 cut(s) 1002
MseI TTAA 9 cut(s) 192, 201, 584, 681, 858, 887, 1251, 1272, 1306
MslI CAYNNNNRTG 1 cut(s) 1171
MspCI CTTAAG 3 cut(s) 191, 1250, 1271
MspI CCGG 1 cut(s) 384
MspR9I CCNGG 5 cut(s) 355, 385, 436, 849, 1110
MunI CAATTG 2 cut(s) 1122, 1158
Mva1269I GAATGC 1 cut(s) 899
MvaI CCWGG 4 cut(s) 355, 436, 849, 1110
MwoI GCNNNNNNNGC 4 cut(s) 23, 89, 431, 800
NciI CCSGG 1 cut(s) 385
NdeII GATC 5 cut(s) 183, 676, 739, 972, 1200
NlaIII CATG 7 cut(s) 26, 157, 334, 368, 602, 664, 1072
NlaIV GGNNCC 2 cut(s) 974, 1066
NmuCI GTSAC 4 cut(s) 410, 512, 668, 838
NsiI ATGCAT 1 cut(s) 901
NspI RCATGY 1 cut(s) 368
PciSI GCTCTTC 2 cut(s) 24, 946
PctI GAATGC 1 cut(s) 899
PdmI GAANNNNTTC 1 cut(s) 1002
PfeI GAWTC 3 cut(s) 494, 545, 1129
PflFI GACNNNGTC 1 cut(s) 272
PkrI GCNGC 4 cut(s) 160, 613, 805, 832
PshBI ATTAAT 1 cut(s) 858
PsiI TTATAA 1 cut(s) 914
Psp6I CCWGG 4 cut(s) 353, 434, 847, 1108
PspGI CCWGG 4 cut(s) 353, 434, 847, 1108
PspN4I GGNNCC 2 cut(s) 974, 1066
PspPI GGNCC 1 cut(s) 1065
PsrI GAACNNNNNNTAC 2 cut(s) 828, 860
PstNI CAGNNNCTG 1 cut(s) 848
PsuI RGATCY 3 cut(s) 676, 739, 972
PsyI GACNNNGTC 1 cut(s) 272
RsaI GTAC 2 cut(s) 1143, 1241
RsaNI GTAC 2 cut(s) 1142, 1240
RseI CAYNNNNRTG 1 cut(s) 1171
SapI GCTCTTC 2 cut(s) 24, 946
SaqAI TTAA 9 cut(s) 192, 201, 584, 681, 858, 887, 1251, 1272, 1306
SatI GCNGC 4 cut(s) 159, 612, 804, 831
Sau3AI GATC 5 cut(s) 183, 676, 739, 972, 1200
Sau96I GGNCC 1 cut(s) 1065
ScrFI CCNGG 5 cut(s) 355, 385, 436, 849, 1110
SduI GDGCHC 2 cut(s) 222, 1285
SfaNI GCATC 6 cut(s) 79, 382, 421, 529, 886, 1167
SinI GGWCC 1 cut(s) 1065
SmiMI CAYNNNNRTG 1 cut(s) 1171
SmlI CTYRAG 6 cut(s) 191, 498, 508, 1196, 1250, 1271
SmoI CTYRAG 6 cut(s) 191, 498, 508, 1196, 1250, 1271
SpeI ACTAGT 1 cut(s) 166
SsiI CCGC 3 cut(s) 340, 1255, 1276
SspMI CTAG 3 cut(s) 75, 167, 174
StyD4I CCNGG 5 cut(s) 353, 383, 434, 847, 1108
StyI CCWWGG 3 cut(s) 12, 84, 277
TaaI ACNGT 4 cut(s) 114, 416, 820, 844
TaiI ACGT 2 cut(s) 273, 988
TaqI TCGA 1 cut(s) 604
TatI WGTACW 2 cut(s) 1141, 1239
TfiI GAWTC 3 cut(s) 494, 545, 1129
Tru1I TTAA 9 cut(s) 192, 201, 584, 681, 858, 887, 1251, 1272, 1306
Tru9I TTAA 9 cut(s) 192, 201, 584, 681, 858, 887, 1251, 1272, 1306
TscAI CASTG 2 cut(s) 227, 421
TseFI GTSAC 4 cut(s) 410, 512, 668, 838
TseI GCWGC 4 cut(s) 158, 611, 803, 830
Tsp45I GTSAC 4 cut(s) 410, 512, 668, 838
TspDTI ATGAA 9 cut(s) 11, 17, 319, 546, 645, 782, 1087, 1155, 1176
TspGWI ACGGA 1 cut(s) 56
TspRI CASTG 2 cut(s) 227, 421
Tth111I GACNNNGTC 1 cut(s) 272
Vha464I CTTAAG 3 cut(s) 191, 1250, 1271
VpaK11BI GGWCC 1 cut(s) 1065
VspI ATTAAT 1 cut(s) 858
XapI RAATTY 4 cut(s) 34, 326, 471, 691
XceI RCATGY 1 cut(s) 368
XmnI GAANNNNTTC 1 cut(s) 1002
XspI CTAG 3 cut(s) 75, 167, 174
Zsp2I ATGCAT 1 cut(s) 901
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.