protein ubiquitination
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 614 |
| Acc16I | TGCGCA | 1 cut(s) | 566 |
| AccB1I | GGYRCC | 1 cut(s) | 742 |
| AccBSI | CCGCTC | 1 cut(s) | 845 |
| AccI | GTMKAC | 1 cut(s) | 966 |
| AccIII | TCCGGA | 1 cut(s) | 664 |
| AciI | CCGC | 3 cut(s) | 198, 808, 843 |
| AclI | AACGTT | 1 cut(s) | 940 |
| AcoI | YGGCCR | 3 cut(s) | 81, 237, 999 |
| AcsI | RAATTY | 3 cut(s) | 190, 544, 1051 |
| AfaI | GTAC | 7 cut(s) | 114, 307, 311, 356, 364, 520, 886 |
| AflIII | ACRYGT | 1 cut(s) | 75 |
| AgsI | TTSAA | 6 cut(s) | 274, 328, 550, 677, 938, 1021 |
| AluBI | AGCT | 3 cut(s) | 8, 638, 683 |
| AluI | AGCT | 3 cut(s) | 8, 638, 683 |
| Alw26I | GTCTC | 1 cut(s) | 62 |
| Aor13HI | TCCGGA | 1 cut(s) | 664 |
| AoxI | GGCC | 5 cut(s) | 81, 171, 237, 759, 999 |
| ApeKI | GCWGC | 2 cut(s) | 5, 558 |
| ApoI | RAATTY | 3 cut(s) | 190, 544, 1051 |
| AspLEI | GCGC | 1 cut(s) | 567 |
| AspS9I | GGNCC | 1 cut(s) | 760 |
| AsuC2I | CCSGG | 1 cut(s) | 740 |
| AsuHPI | GGTGA | 1 cut(s) | 717 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 346, 379 |
| BalI | TGGCCA | 1 cut(s) | 1001 |
| BanI | GGYRCC | 1 cut(s) | 742 |
| BbsI | GAAGAC | 3 cut(s) | 458, 609, 776 |
| BbvI | GCAGC | 2 cut(s) | 17, 570 |
| BceAI | ACGGC | 2 cut(s) | 252, 359 |
| BclI | TGATCA | 1 cut(s) | 456 |
| BcnI | CCSGG | 1 cut(s) | 740 |
| BcoDI | GTCTC | 1 cut(s) | 62 |
| BfaI | CTAG | 1 cut(s) | 827 |
| BfmI | CTRYAG | 2 cut(s) | 9, 556 |
| BglII | AGATCT | 1 cut(s) | 88 |
| BisI | GCNGC | 3 cut(s) | 6, 559, 843 |
| BlsI | GCNGC | 3 cut(s) | 7, 560, 844 |
| Bme1390I | CCNGG | 1 cut(s) | 740 |
| BmgT120I | GGNCC | 1 cut(s) | 760 |
| BmiI | GGNNCC | 1 cut(s) | 744 |
| BmrFI | CCNGG | 1 cut(s) | 740 |
| BmsI | GCATC | 2 cut(s) | 154, 244 |
| BpiI | GAAGAC | 3 cut(s) | 458, 609, 776 |
| BpuMI | CCSGG | 1 cut(s) | 740 |
| BsaAI | YACGTR | 1 cut(s) | 309 |
| BsaJI | CCNNGG | 3 cut(s) | 168, 234, 957 |
| BsaWI | WCCGGW | 1 cut(s) | 664 |
| Bse1I | ACTGG | 2 cut(s) | 1002, 1041 |
| Bse3DI | GCAATG | 2 cut(s) | 353, 979 |
| BseAI | TCCGGA | 1 cut(s) | 664 |
| BseDI | CCNNGG | 3 cut(s) | 168, 234, 957 |
| BseGI | GGATG | 4 cut(s) | 169, 208, 259, 967 |
| BseMI | GCAATG | 2 cut(s) | 353, 979 |
| BseNI | ACTGG | 2 cut(s) | 1002, 1041 |
| BseXI | GCAGC | 2 cut(s) | 17, 570 |
| BshFI | GGCC | 5 cut(s) | 83, 173, 239, 761, 1001 |
| BshNI | GGYRCC | 1 cut(s) | 742 |
| BsiSI | CCGG | 2 cut(s) | 665, 740 |
| BsmAI | GTCTC | 1 cut(s) | 62 |
| BsmI | GAATGC | 3 cut(s) | 397, 692, 1016 |
| BsnI | GGCC | 5 cut(s) | 83, 173, 239, 761, 1001 |
| Bsp13I | TCCGGA | 1 cut(s) | 664 |
| Bsp1407I | TGTACA | 1 cut(s) | 354 |
| Bsp143I | GATC | 3 cut(s) | 88, 456, 1056 |
| Bsp19I | CCATGG | 1 cut(s) | 957 |
| BspACI | CCGC | 3 cut(s) | 198, 808, 843 |
| BspANI | GGCC | 5 cut(s) | 83, 173, 239, 761, 1001 |
| BspEI | TCCGGA | 1 cut(s) | 664 |
| BspLI | GGNNCC | 1 cut(s) | 744 |
| BspMAI | CTGCAG | 1 cut(s) | 560 |
| BspQI | GCTCTTC | 1 cut(s) | 645 |
| BspT107I | GGYRCC | 1 cut(s) | 742 |
| BsrBI | CCGCTC | 1 cut(s) | 845 |
| BsrDI | GCAATG | 2 cut(s) | 353, 979 |
| BsrGI | TGTACA | 1 cut(s) | 354 |
| BsrI | ACTGG | 2 cut(s) | 1002, 1041 |
| BssECI | CCNNGG | 3 cut(s) | 168, 234, 957 |
| BssMI | GATC | 3 cut(s) | 88, 456, 1056 |
| BssT1I | CCWWGG | 2 cut(s) | 168, 957 |
| Bst4CI | ACNGT | 7 cut(s) | 25, 35, 359, 464, 523, 579, 1010 |
| Bst6I | CTCTTC | 2 cut(s) | 645, 663 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 254 |
| BstAUI | TGTACA | 1 cut(s) | 354 |
| BstBAI | YACGTR | 1 cut(s) | 309 |
| BstC8I | GCNNGC | 3 cut(s) | 397, 563, 793 |
| BstDSI | CCRYGG | 2 cut(s) | 234, 957 |
| BstF5I | GGATG | 4 cut(s) | 169, 208, 259, 967 |
| BstHHI | GCGC | 1 cut(s) | 567 |
| BstKTI | GATC | 3 cut(s) | 91, 459, 1059 |
| BstMAI | GTCTC | 1 cut(s) | 62 |
| BstMBI | GATC | 3 cut(s) | 88, 456, 1056 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 179, 236, 245, 254, 477, 564 |
| BstNSI | RCATGY | 1 cut(s) | 79 |
| BstSCI | CCNGG | 1 cut(s) | 738 |
| BstSFI | CTRYAG | 2 cut(s) | 9, 556 |
| BstSNI | TACGTA | 1 cut(s) | 309 |
| BstV1I | GCAGC | 2 cut(s) | 17, 570 |
| BstV2I | GAAGAC | 3 cut(s) | 458, 609, 776 |
| BstX2I | RGATCY | 1 cut(s) | 88 |
| BstYI | RGATCY | 1 cut(s) | 88 |
| BsuRI | GGCC | 5 cut(s) | 83, 173, 239, 761, 1001 |
| BtgI | CCRYGG | 2 cut(s) | 234, 957 |
| BtsCI | GGATG | 4 cut(s) | 169, 208, 259, 967 |
| Cac8I | GCNNGC | 3 cut(s) | 397, 563, 793 |
| CfoI | GCGC | 1 cut(s) | 567 |
| Cfr13I | GGNCC | 1 cut(s) | 760 |
| Csp6I | GTAC | 7 cut(s) | 113, 306, 310, 355, 363, 519, 885 |
| CviAII | CATG | 7 cut(s) | 76, 249, 317, 388, 472, 691, 958 |
| CviQI | GTAC | 7 cut(s) | 113, 306, 310, 355, 363, 519, 885 |
| DpnI | GATC | 3 cut(s) | 90, 458, 1058 |
| DpnII | GATC | 3 cut(s) | 88, 456, 1056 |
| EaeI | YGGCCR | 3 cut(s) | 81, 237, 999 |
| Eam1104I | CTCTTC | 2 cut(s) | 645, 663 |
| EarI | CTCTTC | 2 cut(s) | 645, 663 |
| Eco105I | TACGTA | 1 cut(s) | 309 |
| Eco130I | CCWWGG | 2 cut(s) | 168, 957 |
| Eco147I | AGGCCT | 1 cut(s) | 173 |
| Eco32I | GATATC | 1 cut(s) | 406 |
| EcoRI | GAATTC | 1 cut(s) | 190 |
| EcoRV | GATATC | 1 cut(s) | 406 |
| EcoT14I | CCWWGG | 2 cut(s) | 168, 957 |
| EcoT22I | ATGCAT | 1 cut(s) | 692 |
| ErhI | CCWWGG | 2 cut(s) | 168, 957 |
| FaeI | CATG | 7 cut(s) | 79, 252, 320, 391, 475, 694, 961 |
| FatI | CATG | 7 cut(s) | 75, 248, 316, 387, 471, 690, 957 |
| FauI | CCCGC | 2 cut(s) | 191, 815 |
| FbaI | TGATCA | 1 cut(s) | 456 |
| FblI | GTMKAC | 1 cut(s) | 966 |
| Fnu4HI | GCNGC | 3 cut(s) | 6, 559, 843 |
| FokI | GGATG | 4 cut(s) | 176, 215, 266, 974 |
| Fsp4HI | GCNGC | 3 cut(s) | 6, 559, 843 |
| FspAI | RTGCGCAY | 1 cut(s) | 566 |
| FspBI | CTAG | 1 cut(s) | 827 |
| FspI | TGCGCA | 1 cut(s) | 566 |
| GlaI | GCGC | 1 cut(s) | 566 |
| GluI | GCNGC | 3 cut(s) | 6, 559, 843 |
| HaeIII | GGCC | 5 cut(s) | 83, 173, 239, 761, 1001 |
| HapII | CCGG | 2 cut(s) | 665, 740 |
| HhaI | GCGC | 1 cut(s) | 567 |
| Hin1II | CATG | 7 cut(s) | 79, 252, 320, 391, 475, 694, 961 |
| Hin6I | GCGC | 1 cut(s) | 565 |
| HinP1I | GCGC | 1 cut(s) | 565 |
| HpaII | CCGG | 2 cut(s) | 665, 740 |
| HphI | GGTGA | 1 cut(s) | 717 |
| Hpy166II | GTNNAC | 2 cut(s) | 887, 967 |
| Hpy188I | TCNGA | 2 cut(s) | 63, 265 |
| Hpy188III | TCNNGA | 4 cut(s) | 187, 223, 541, 665 |
| Hpy8I | GTNNAC | 2 cut(s) | 887, 967 |
| HpyAV | CCTTC | 4 cut(s) | 154, 322, 376, 479 |
| HpyCH4III | ACNGT | 7 cut(s) | 25, 35, 359, 464, 523, 579, 1010 |
| HpyCH4IV | ACGT | 3 cut(s) | 99, 308, 940 |
| HpyCH4V | TGCA | 6 cut(s) | 182, 395, 494, 558, 690, 972 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 179, 236, 245, 254, 477, 564 |
| HpySE526I | ACGT | 3 cut(s) | 99, 308, 940 |
| Hsp92II | CATG | 7 cut(s) | 79, 252, 320, 391, 475, 694, 961 |
| HspAI | GCGC | 1 cut(s) | 565 |
| Kpn2I | TCCGGA | 1 cut(s) | 664 |
| Ksp22I | TGATCA | 1 cut(s) | 456 |
| Kzo9I | GATC | 3 cut(s) | 88, 456, 1056 |
| LguI | GCTCTTC | 1 cut(s) | 645 |
| LpnPI | CCDG | 8 cut(s) | 172, 381, 554, 678, 721, 753, 1015, 1022 |
| Lsp1109I | GCAGC | 2 cut(s) | 17, 570 |
| LweI | GCATC | 2 cut(s) | 154, 244 |
| MaeI | CTAG | 1 cut(s) | 827 |
| MaeII | ACGT | 3 cut(s) | 99, 308, 940 |
| MaeIII | GTNAC | 5 cut(s) | 694, 715, 917, 991, 1004 |
| MalI | GATC | 3 cut(s) | 90, 458, 1058 |
| MbiI | CCGCTC | 1 cut(s) | 845 |
| MboI | GATC | 3 cut(s) | 88, 456, 1056 |
| MflI | RGATCY | 1 cut(s) | 88 |
| MlsI | TGGCCA | 1 cut(s) | 1001 |
| MluNI | TGGCCA | 1 cut(s) | 1001 |
| MnlI | CCTC | 4 cut(s) | 475, 738, 751, 756 |
| Mox20I | TGGCCA | 1 cut(s) | 1001 |
| Mph1103I | ATGCAT | 1 cut(s) | 692 |
| MroI | TCCGGA | 1 cut(s) | 664 |
| MscI | TGGCCA | 1 cut(s) | 1001 |
| MseI | TTAA | 6 cut(s) | 30, 573, 590, 632, 650, 932 |
| MslI | CAYNNNNRTG | 1 cut(s) | 390 |
| Msp20I | TGGCCA | 1 cut(s) | 1001 |
| MspI | CCGG | 2 cut(s) | 665, 740 |
| MspR9I | CCNGG | 1 cut(s) | 740 |
| Mva1269I | GAATGC | 3 cut(s) | 397, 692, 1016 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 179, 236, 245, 254, 477, 564 |
| NciI | CCSGG | 1 cut(s) | 740 |
| NcoI | CCATGG | 1 cut(s) | 957 |
| NdeII | GATC | 3 cut(s) | 88, 456, 1056 |
| NlaIII | CATG | 7 cut(s) | 79, 252, 320, 391, 475, 694, 961 |
| NlaIV | GGNNCC | 1 cut(s) | 744 |
| NsbI | TGCGCA | 1 cut(s) | 566 |
| NsiI | ATGCAT | 1 cut(s) | 692 |
| NspI | RCATGY | 1 cut(s) | 79 |
| PceI | AGGCCT | 1 cut(s) | 173 |
| PciI | ACATGT | 1 cut(s) | 75 |
| PciSI | GCTCTTC | 1 cut(s) | 645 |
| PctI | GAATGC | 3 cut(s) | 397, 692, 1016 |
| PkrI | GCNGC | 3 cut(s) | 7, 560, 844 |
| Ppu21I | YACGTR | 1 cut(s) | 309 |
| PscI | ACATGT | 1 cut(s) | 75 |
| PsiI | TTATAA | 1 cut(s) | 614 |
| Psp1406I | AACGTT | 1 cut(s) | 940 |
| PspN4I | GGNNCC | 1 cut(s) | 744 |
| PspPI | GGNCC | 1 cut(s) | 760 |
| PstI | CTGCAG | 1 cut(s) | 560 |
| PsuI | RGATCY | 1 cut(s) | 88 |
| RsaI | GTAC | 7 cut(s) | 114, 307, 311, 356, 364, 520, 886 |
| RsaNI | GTAC | 7 cut(s) | 113, 306, 310, 355, 363, 519, 885 |
| RseI | CAYNNNNRTG | 1 cut(s) | 390 |
| SapI | GCTCTTC | 1 cut(s) | 645 |
| SaqAI | TTAA | 6 cut(s) | 30, 573, 590, 632, 650, 932 |
| SatI | GCNGC | 3 cut(s) | 6, 559, 843 |
| Sau3AI | GATC | 3 cut(s) | 88, 456, 1056 |
| Sau96I | GGNCC | 1 cut(s) | 760 |
| ScrFI | CCNGG | 1 cut(s) | 740 |
| SetI | ASST | 8 cut(s) | 10, 102, 311, 368, 640, 685, 730, 943 |
| SfaNI | GCATC | 2 cut(s) | 154, 244 |
| SfcI | CTRYAG | 2 cut(s) | 9, 556 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 390 |
| SnaBI | TACGTA | 1 cut(s) | 309 |
| SseBI | AGGCCT | 1 cut(s) | 173 |
| SsiI | CCGC | 3 cut(s) | 198, 808, 843 |
| SspMI | CTAG | 1 cut(s) | 827 |
| StuI | AGGCCT | 1 cut(s) | 173 |
| StyD4I | CCNGG | 1 cut(s) | 738 |
| StyI | CCWWGG | 2 cut(s) | 168, 957 |
| TaaI | ACNGT | 7 cut(s) | 25, 35, 359, 464, 523, 579, 1010 |
| TaiI | ACGT | 3 cut(s) | 102, 311, 943 |
| TatI | WGTACW | 1 cut(s) | 354 |
| TauI | GCSGC | 1 cut(s) | 845 |
| Tru1I | TTAA | 6 cut(s) | 30, 573, 590, 632, 650, 932 |
| Tru9I | TTAA | 6 cut(s) | 30, 573, 590, 632, 650, 932 |
| TseI | GCWGC | 2 cut(s) | 5, 558 |
| XapI | RAATTY | 3 cut(s) | 190, 544, 1051 |
| XceI | RCATGY | 1 cut(s) | 79 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1009 |
| XmiI | GTMKAC | 1 cut(s) | 966 |
| XspI | CTAG | 1 cut(s) | 827 |
| Zsp2I | ATGCAT | 1 cut(s) | 692 |