Prupe.2G082900_v2.0.a1

Domain of unknown function

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
OG0000027
Physical Location & Seq
Reverse (-)
13125697 .. 13133497
7801 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G082900.1

Sequence Viewer

Length: 2007 bp
ATGGCAACAAGTGCCGTCTCCGCAGGTACAATTGTCTTGGAAGTCCTTAACAACCGTAACTACGTGGATTGGAGTGTTTATCTTAGAAATTACTTGTTGGCTCAAGACCTTTGGGATGCAGTGAAGGCTACAGATGAACCTCCTGAAGATGAAGAAAAAGAAGCTGATGGTCCGTTCAAGGCTTGGAGGAAGAAGAATGCCATGGCTTTACATACAATCCAAATTTCGTGCGGGCCGGAAGCTTTTGCGCTTATTAGGGACAGCAATTCAGCCAAATTTGCTTGGGATGCTTTGGCAGCAAACTTCAAGACACAAGCATTACTTCCAAGTGATTTGCCTGTTGAATCTGCAACCTCATCAAACAACCCAGGATATGACGAGAGTGTGTGTGACTTCCGTCAGTATCAGCCGTTCTTCAAGGCTGTCAGGAGTGGGGATTGGAATAAAGCAAAGGAGCTTCTTACCCTACATCCCAATGCAGCAAGAGCAAAAATTCCGTACTCAAACAAGACAGCTCTTTACATAGCAACAGAATTAGAACACGAGCATATTGTGGAAGAGTTGGTGCAATTGATGCTAGAGGAAGACTTGGAAATAAAATCTTCTGGTTGGACAGCTCTTGCTGTTGCTGCAGATAGAGGAAATATCAAAATAGTTGAATGCATGGTTAGAAAGAGCAAGAAAATACTTAGCATTGCCACTGAGAACAACAATATGACTCCAATTCTCTTGGCCTGTATCAGTGAGCATTGGGATGTTGTCCGTTATCTATACTCCGTCACTCCACTCGAAGATCTAATGCCTGATAAAGGTCCCTATGGCGCTGGACTTGTTTGCCATTCTATCGGTGTCAAAAAATTTGATATTGCACAGGAATTAATTAATCGTTGCCCAAAATTGGTCCTTACGAAAGATCCCTTTGGGATATCCCCGATGCATGCATTGGCATTTTTGCCTTCTATATTCCCAAGAATCAACCGCATACGTGAAATGAAATTGATCCATATTCAATCCCTTCAAATTCTAGACCACATGTGTGAAGTGATGACACATTTAGATGGTAAAGAAATGGAAGATGTACATGAAGCAATTTTCCGAGCTGTTGAACGAGGGATTTTTGAGTTTATTGATCGTATATTCCAAGCAAGTCCAAATCTCGTGTGGAGCTATAATCGAATGAGAAGGAACGCATTTCAATTTGCCATTGAATGTCGTCAAGAAAAAGTTTATACCCTGATTTATAAACTTGATAAAAGAAAAAGAAGTTCGATTGCAAATCTTGTAGATACTTCTAAGAATGGCATGCTACATGTGGCAGGGATGTTATCCCCGTTAGCAAAGTTGGATAATATCTCAGGTGCAGCTTTGCAAATGCAGAGAGAATTGCAATGGTTTAAGGAGGTGGAGACTATTACATTTCCCAGGAGCAAAGAAGCTTTAAATGCAGAGTTTTTGGCACCACGTGATGTCTTTACCAAGAACCACAAGGAATTGGTGAAGGAAGGAGAAAGGTGGATGAAAGAAACTGCAACTTCTTGTACATTTGTAGGTGCTCTCATTTTTACCATCATGTTTGCTTCAGCATTCACAGTTCCTGGTGGAAACAATGAACGGACAGGCATTCCCATATTCTTGAATAAGAAGATATTTATGGTTTTTATAGTTTCAGATGCCATATCGCTCTTTTCTTCCACAACTTCAGTGTTGAAGTTCTTGGGAATTCTTACATCACGTTATGCAGAAGATGATTTCCTCAAATCCTTACCAACAAAGATGATAATAGGGCTTTCCACACTATTCTTCTCTATTGCCGCCATGATGGTTGCCTTTTCTTCTGCCCTGTTCATTATGATCCATCAACAATCATGGATTGTTGTTCCAATCATATTCCTTGCTACTGTTCCAATCACCTTATTTATTTGGATGCAGTTTCCTCTTCTTGTTGAGATGTTCATTTCTACTTATGGAAGTGGAATATTCGATAGGAAAGTGAAACAGTGGACATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank_2 DUF4219 PGG

Protein Analysis

669

Amino Acids

75.69

Weight (kDa)

6.73

Isoelectric Point (pI)

40.28

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000027)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G18670 AT3G18670 AT3G54065
fragaria_vesca FvH4_1g26570 FvH4_1g26570 FvH4_5g19270 FvH4_5g19273 FvH4_5g35840 FvH4_5g36340 FvH4_5g36630 FvH4_5g37181 FvH4_5g37182 FvH4_5g37185 FvH4_5g37240 FvH4_5g37260 FvH4_6g21440 FvH4_6g44571 FvH4_6g44572 FvH4_6g44610 FvH4_6g44620 FvH4_6g44650 FvH4_6g44660 FvH4_6g45151 FvH4_6g45152 FvH4_6g45152 FvH4_6g45153 FvH4_6g45153 FvH4_6g45153 FvH4_6g45153 FvH4_6g45153 FvH4_6g45154 FvH4_6g51440 FvH4_7g08090 FvH4_7g08090 FvH4_7g08090 FvH4_7g08090 FvH4_7g08090 FvH4_7g08090
malus_domestica MD00G1010300.v1.1 MD00G1010400.v1.1 MD00G1010500.v1.1 MD00G1011000.v1.1 MD00G1011200.v1.1 MD00G1011500.v1.1 MD00G1011900.v1.1 MD03G1133900.v1.1 MD03G1134100.v1.1 MD09G1086300.v1.1 MD09G1086500.v1.1 MD09G1086900.v1.1 MD09G1087000.v1.1 MD09G1088000.v1.1 MD09G1088100.v1.1 MD09G1088200.v1.1 MD09G1088300.v1.1 MD09G1089000.v1.1 MD09G1089300.v1.1 MD09G1133800.v1.1 MD16G1219400.v1.1 MD17G1027900.v1.1 MD17G1028400.v1.1 MD17G1028600.v1.1 MD17G1028700.v1.1 MD17G1028900.v1.1 MD17G1029000.v1.1 MD17G1029100.v1.1 MD17G1029200.v1.1 MD17G1075400.v1.1 MD17G1076000.v1.1 MD17G1077000.v1.1 MD17G1077100.v1.1 MD17G1077800.v1.1 MD17G1078000.v1.1 MD17G1078100.v1.1 MD17G1078300.v1.1 MD17G1100900.v1.1 MD17G1101100.v1.1 MD17G1101400.v1.1 MD17G1104200.v1.1 MD17G1104500.v1.1 MD17G1121300.v1.1 MD17G1121600.v1.1 MD17G1121900.v1.1 MD17G1122700.v1.1 MD17G1218800.v1.1
prunus_persica Prupe.2G033800_v2.0.a1 Prupe.2G033900_v2.0.a1 Prupe.2G080300_v2.0.a1 Prupe.2G080700_v2.0.a1 Prupe.2G080900_v2.0.a1 Prupe.2G081100_v2.0.a1 Prupe.2G081100_v2.0.a1 Prupe.2G081200_v2.0.a1 Prupe.2G081200_v2.0.a1 Prupe.2G081200_v2.0.a1 Prupe.2G081200_v2.0.a1 Prupe.2G081700_v2.0.a1 Prupe.2G081700_v2.0.a1 Prupe.2G082000_v2.0.a1 Prupe.2G082100_v2.0.a1 Prupe.2G082100_v2.0.a1 Prupe.2G082200_v2.0.a1 Prupe.2G082300_v2.0.a1 Prupe.2G082700_v2.0.a1 Prupe.2G082800_v2.0.a1 Prupe.2G082900_v2.0.a1 Prupe.3G235600_v2.0.a1 Prupe.3G236300_v2.0.a1 Prupe.3G236300_v2.0.a1 Prupe.3G236600_v2.0.a1 Prupe.3G236600_v2.0.a1 Prupe.3G236800_v2.0.a1 Prupe.3G237000_v2.0.a1 Prupe.3G237100_v2.0.a1 Prupe.3G237300_v2.0.a1 Prupe.3G237400_v2.0.a1 Prupe.3G237500_v2.0.a1 Prupe.3G237500_v2.0.a1 Prupe.3G237500_v2.0.a1 Prupe.4G282500_v2.0.a1 Prupe.4G282500_v2.0.a1
pyrus_communis pycom03g08990 pycom03g09000 pycom09g01180 pycom09g01190 pycom09g01220 pycom09g01230 pycom09g01360 pycom09g01370 pycom09g01380 pycom09g01410 pycom09g05500 pycom11g10280 pycom11g10290 pycom11g10310 pycom16g18270 pycom16g18280 pycom17g02280 pycom17g02290 pycom17g02300 pycom17g02360 pycom17g02390 pycom17g02410 pycom17g02440 pycom17g02460 pycom17g02470 pycom17g02480 pycom17g02510 pycom17g02530 pycom17g02540 pycom17g02550 pycom17g02560 pycom17g02570 pycom17g02580 pycom17g02630 pycom17g02640 pycom17g04970 pycom17g04980 pycom17g05010 pycom17g07090 pycom17g07620 pycom17g07630 pycom17g07640 pycom17g07650 pycom17g07660 pycom17g07740 pycom17g07760 pycom17g07770 pycom17g09580 pycom17g11170 pycom17g11200 pycom17g11220 pycom17g11240 pycom17g11250 pycom17g11300 pycom17g11340 pycom17g11380 pycom17g11440
rosa_chinensis RchiOBHm_Chr1g0332901 RchiOBHm_Chr1g0338981 RchiOBHm_Chr1g0338991 RchiOBHm_Chr1g0341201 RchiOBHm_Chr1g0341211 RchiOBHm_Chr1g0342721 RchiOBHm_Chr1g0343191 RchiOBHm_Chr2g0146761 RchiOBHm_Chr2g0161791 RchiOBHm_Chr2g0161801 RchiOBHm_Chr2g0161841 RchiOBHm_Chr2g0162041 RchiOBHm_Chr2g0162651 RchiOBHm_Chr2g0162691 RchiOBHm_Chr2g0162701 RchiOBHm_Chr2g0162711 RchiOBHm_Chr2g0162721 RchiOBHm_Chr2g0162811 RchiOBHm_Chr2g0162831 RchiOBHm_Chr2g0162841 RchiOBHm_Chr4g0416381 RchiOBHm_Chr4g0416391 RchiOBHm_Chr5g0075981 RchiOBHm_Chr6g0276101 RchiOBHm_Chr7g0214581 RchiOBHm_Chr7g0214631 RchiOBHm_Chr7g0214651 RchiOBHm_Chr7g0214721 RchiOBHm_Chr7g0223161 RchiOBHm_Chr7g0230661 RchiOBHm_Chr7g0230751 RchiOBHm_Chr7g0230781 RchiOBHm_Chr7g0234581 RchiOBHm_Chr7g0234601 RchiOBHm_Chr7g0237561 RchiOBHm_Chr7g0237571 RchiOBHm_Chr7g0238781 RchiOBHm_Chr7g0238811 RchiOBHm_Chr7g0242161 RchiOBHm_Chr7g0242401 RchiOBHm_Chr7g0242451 RchiOBHm_Chr7g0242921 RchiOBHm_Chr7g0242981 RchiOBHm_Chr7g0243111 RchiOBHm_Chr7g0243251 RchiOBHm_Chr7g0243331
rosa_laevigata RLG00000000803 RLG00000000807 RLG00000000809 RLG00000000811 RLG00000000814 RLG00000000854 RLG00000000859 RLG00000000864 RLG00000000994 RLG00000000995 RLG00000001458 RLG00000001461 RLG00000001474 RLG00000001476 RLG00000002729 RLG00000002730 RLG00000003505 RLG00000008871 RLG00000008873 RLG00000018513 RLG00000021300 RLG00000021303 RLG00000021318 RLG00000021356 RLG00000021357 RLG00000029070 RLG00000029071 RLG00000029171 RLG00000029189 RLG00000029190 RLG00000029640 RLG00000034635
rosa_multiflora Rmu_co8149086.1_g000001 Rmu_co8460577.1_g000001 Rmu_sc0000429.1_g000062 Rmu_sc0000429.1_g000071 Rmu_sc0000429.1_g000081 Rmu_sc0000863.1_g000020 Rmu_sc0001488.1_g000011 Rmu_sc0001545.1_g000007 Rmu_sc0001849.1_g000068 Rmu_sc0001993.1_g000003 Rmu_sc0002222.1_g000002 Rmu_sc0002308.1_g000053 Rmu_sc0002308.1_g000069 Rmu_sc0002480.1_g000007 Rmu_sc0003179.1_g000041 Rmu_sc0004213.1_g000011 Rmu_sc0007101.1_g000012 Rmu_sc0008565.1_g000011 Rmu_sc0009298.1_g000003 Rmu_sc0010407.1_g000009 Rmu_sc0010407.1_g000013 Rmu_sc0026966.1_g000004 Rmu_ssc0000152.1_g000012 Rmu_ssc0000152.1_g000014 Rmu_ssc0000295.1_g000021 Rmu_ssc0000295.1_g000026
rosa_roxburghii Rroxscaffold_1G00029600 Rroxscaffold_2G00087790 Rroxscaffold_2G00087800 Rroxscaffold_2G00088360 Rroxscaffold_2G00088500 Rroxscaffold_2G00088530 Rroxscaffold_2G00088590 Rroxscaffold_3G00221570 Rroxscaffold_3G00222190 Rroxscaffold_3G00222240 Rroxscaffold_3G00222880 Rroxscaffold_3G00222900 Rroxscaffold_3G00223990 Rroxscaffold_3G00229750 Rroxscaffold_3G00229760 Rroxscaffold_3G00245140 Rroxscaffold_3G00245150 Rroxscaffold_3G00245200 Rroxscaffold_3G00253520 Rroxscaffold_3G00253530 Rroxscaffold_4G00294500 Rroxscaffold_4G00311800 Rroxscaffold_4G00311830 Rroxscaffold_4G00311850 Rroxscaffold_4G00313180 Rroxscaffold_4G00313210 Rroxscaffold_4G00316270 Rroxscaffold_4G00317910 Rroxscaffold_4G00317920 Rroxscaffold_5G00349290 Rroxscaffold_5G00349300 Rroxscaffold_5G00349310 Rroxscaffold_5G00351950 Rroxscaffold_5G00351960 Rroxscaffold_5G00353390 Rroxscaffold_7G00192540
rosa_rugosa Rorug01G0102500 Rorug01G0102600 Rorug01G0146400.1 Rorug01G0146500.1 Rorug01G0159400.1 Rorug01G0159500.1 Rorug02G0491900 Rorug02G0492000 Rorug02G0492100 Rorug02G0492200 Rorug02G0492300 Rorug02G0492400 Rorug02G0492500 Rorug02G0492700 Rorug02G0498500 Rorug02G0498600 Rorug02G0498800 Rorug04G0006900 Rorug04G0053700 Rorug06G0002000 Rorug06G0002100 Rorug07G0304700 Rorug07G0304800 Rorug07G0304800 Rorug07G0304800 Rorug07G0305300 Rorug07G0305400 Rorug07G0305500 Rorug07G0305500 Rorug07G0318300 Rorug07G0318600 Rorug07G0323600
rosa_samantha Rh1AG128900 Rh1AG162500 Rh1AG163000 Rh1AG164000 Rh1AG164700 Rh1AG173200 Rh1AG173300 Rh1AG173800 Rh1BG098100 Rh1BG129800 Rh1BG130600 Rh1BG141300 Rh1BG141500 Rh1BG141600 Rh1CG122700 Rh1CG151900 Rh1CG152400 Rh1CG153100 Rh1CG153500 Rh1CG161400 Rh1CG161600 Rh1DG134200 Rh1DG173500 Rh1DG173700 Rh2AG558100 Rh2AG558500 Rh2AG560200 Rh2AG564700 Rh2AG564800 Rh2BG465600 Rh2BG571700 Rh2BG572000 Rh2BG573500 Rh2CG439800 Rh2CG541800 Rh2CG542100 Rh2CG542200 Rh2CG543800 Rh2CG547300 Rh2DG474700 Rh2DG580600 Rh2DG580900 Rh2DG581200 Rh2DG581700 Rh2DG581800 Rh2DG583500 Rh2DG587200 Rh2DG587300 Rh2DG587400 Rh4AG128900 Rh4AG203800 Rh4AG319900 Rh4AG320000 Rh4BG122200 Rh4BG201100 Rh4CG136000 Rh4DG122400 Rh4DG201100 Rh4DG323600 Rh6BG077000 Rh6DG206200 Rh7AG282300 Rh7AG282500 Rh7AG283400 Rh7AG358600 Rh7AG414500 Rh7AG415200 Rh7AG415500 Rh7AG461700 Rh7AG469300 Rh7AG477800 Rh7BG273900 Rh7BG274000 Rh7BG390400 Rh7BG390500 Rh7BG391500 Rh7BG391800 Rh7BG408300 Rh7BG432000 Rh7BG439200 Rh7BG449200 Rh7BG449900 Rh7BG450400 Rh7BG450500 Rh7CG220900 Rh7CG301600 Rh7CG302700 Rh7CG377000 Rh7CG433900 Rh7CG434200 Rh7CG478800 Rh7DG286200 Rh7DG354000 Rh7DG424600 Rh7DG448000 Rh7DG462800 Rh7DG462900
rosa_wichuraiana Rw0G003440 Rw0G011970 Rw0G017120 Rw0G017130 Rw0G017140 Rw0G018470 Rw0G018480 Rw0G020440 Rw1G010470 Rw2G046180 Rw2G046210 Rw2G046230 Rw2G046390 Rw2G046400 Rw2G046710 Rw2G046720 Rw2G046730 Rw3G025310 Rw4G010410 Rw4G017250 Rw6G018270 Rw7G018180 Rw7G024130 Rw7G024160 Rw7G024170 Rw7G034060 Rw7G034250 Rw7G034260 Rw7G034400 Rw7G034410 Rw7G038210 Rw7G039020 Rw7G039060 Rw7G039280 Rw7G039400 Rw7G039470 Rw7G039880 Rw7G039890

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1242
Acc36I ACCTGC 1 cut(s) 14
AccB1I GGYRCC 1 cut(s) 1456
AciI CCGC 4 cut(s) 21, 231, 979, 1812
AclWI GGATC 3 cut(s) 908, 994, 1846
AcsI RAATTY 6 cut(s) 222, 275, 492, 857, 1020, 1719
AcuI CTGAAG 3 cut(s) 165, 1563, 1683
AcvI CACGTG 1 cut(s) 1463
AdeI CACNNNGTG 1 cut(s) 1463
AfaI GTAC 4 cut(s) 28, 500, 1080, 1540
AfiI CCNNNNNNNGG 2 cut(s) 809, 898
AflIII ACRYGT 2 cut(s) 1032, 1309
AjnI CCWGG 3 cut(s) 367, 1421, 1594
AleI CACNNNNGTG 1 cut(s) 1035
AluBI AGCT 9 cut(s) 164, 242, 457, 515, 617, 1100, 1167, 1364, 1436
AluI AGCT 9 cut(s) 164, 242, 457, 515, 617, 1100, 1167, 1364, 1436
Alw21I GWGCWC 1 cut(s) 1555
Alw26I GTCTC 2 cut(s) 22, 1400
AlwI GGATC 3 cut(s) 908, 994, 1846
AlwNI CAGNNNCTG 1 cut(s) 1595
AoxI GGCC 2 cut(s) 233, 732
ApeKI GCWGC 4 cut(s) 296, 479, 629, 1361
ApoI RAATTY 6 cut(s) 222, 275, 492, 857, 1020, 1719
AseI ATTAAT 2 cut(s) 878, 882
AspLEI GCGC 2 cut(s) 250, 824
AspS9I GGNCC 4 cut(s) 170, 233, 812, 901
AsuHPI GGTGA 2 cut(s) 1507, 1900
AvaII GGWCC 3 cut(s) 170, 812, 901
BaeI ACNNNNGTAYC 2 cut(s) 18, 51
BanI GGYRCC 1 cut(s) 1456
BauI CACGAG 2 cut(s) 542, 1157
BbrPI CACGTG 1 cut(s) 1463
BbsI GAAGAC 1 cut(s) 591
Bbv12I GWGCWC 1 cut(s) 1555
BbvI GCAGC 4 cut(s) 308, 491, 616, 1373
BccI CCATC 5 cut(s) 161, 1052, 1574, 1813, 1863
BceAI ACGGC 1 cut(s) 394
BciT130I CCWGG 3 cut(s) 369, 1423, 1596
BcoDI GTCTC 2 cut(s) 22, 1400
BfaI CTAG 2 cut(s) 578, 1025
BfmI CTRYAG 2 cut(s) 129, 630
BfoI RGCGCY 1 cut(s) 825
BfuAI ACCTGC 1 cut(s) 14
BglII AGATCT 1 cut(s) 793
BisI GCNGC 5 cut(s) 297, 480, 630, 1362, 1812
BlsI GCNGC 5 cut(s) 298, 481, 631, 1363, 1813
Bme1390I CCNGG 3 cut(s) 369, 1423, 1596
Bme18I GGWCC 3 cut(s) 170, 812, 901
BmgT120I GGNCC 4 cut(s) 170, 233, 812, 901
BmiI GGNNCC 2 cut(s) 814, 1458
BmrFI CCNGG 3 cut(s) 369, 1423, 1596
BmsI GCATC 6 cut(s) 106, 277, 564, 924, 1660, 1914
BoxI GACNNNNGTC 1 cut(s) 396
BpiI GAAGAC 1 cut(s) 591
BpuEI CTTGAG 1 cut(s) 87
BsaAI YACGTR 3 cut(s) 64, 986, 1463
BsaJI CCNNGG 3 cut(s) 201, 367, 1421
Bsc4I CCNNNNNNNGG 2 cut(s) 809, 898
Bse3DI GCAATG 2 cut(s) 693, 1394
BseBI CCWGG 3 cut(s) 369, 1423, 1596
BseDI CCNNGG 3 cut(s) 201, 367, 1421
BseGI GGATG 7 cut(s) 121, 292, 469, 760, 1326, 1521, 1929
BseLI CCNNNNNNNGG 2 cut(s) 809, 898
BseMI GCAATG 2 cut(s) 693, 1394
BseMII CTCAG 2 cut(s) 693, 1368
BseXI GCAGC 4 cut(s) 308, 491, 616, 1373
BsgI GTGCAG 1 cut(s) 1380
BshFI GGCC 2 cut(s) 235, 734
BshNI GGYRCC 1 cut(s) 1456
BsiHKAI GWGCWC 1 cut(s) 1555
BsiSI CCGG 1 cut(s) 236
BslFI GGGAC 2 cut(s) 272, 798
BslI CCNNNNNNNGG 2 cut(s) 809, 898
BsmAI GTCTC 2 cut(s) 22, 1400
BsmBI CGTCTC 1 cut(s) 22
BsmFI GGGAC 2 cut(s) 272, 798
BsmI GAATGC 4 cut(s) 202, 665, 1583, 1620
BsnI GGCC 2 cut(s) 235, 734
Bsp1286I GDGCHC 1 cut(s) 1555
Bsp1407I TGTACA 2 cut(s) 1078, 1538
Bsp143I GATC 5 cut(s) 793, 913, 999, 1129, 1851
Bsp19I CCATGG 1 cut(s) 201
BspACI CCGC 4 cut(s) 21, 231, 979, 1812
BspANI GGCC 2 cut(s) 235, 734
BspCNI CTCAG 2 cut(s) 694, 1367
BspLI GGNNCC 2 cut(s) 814, 1458
BspMAI CTGCAG 1 cut(s) 634
BspMI ACCTGC 1 cut(s) 14
BspPI GGATC 3 cut(s) 908, 994, 1846
BspT107I GGYRCC 1 cut(s) 1456
BsrDI GCAATG 2 cut(s) 693, 1394
BsrGI TGTACA 2 cut(s) 1078, 1538
BssECI CCNNGG 3 cut(s) 201, 367, 1421
BssMI GATC 5 cut(s) 793, 913, 999, 1129, 1851
BssSI CACGAG 2 cut(s) 542, 1157
BssT1I CCWWGG 1 cut(s) 201
Bst2BI CACGAG 2 cut(s) 542, 1157
Bst2UI CCWGG 3 cut(s) 369, 1423, 1596
Bst4CI ACNGT 4 cut(s) 56, 1591, 1900, 1998
Bst6I CTCTTC 2 cut(s) 552, 1941
BstAPI GCANNNNNTGC 2 cut(s) 11, 574
BstAUI TGTACA 2 cut(s) 1078, 1538
BstBAI YACGTR 3 cut(s) 64, 986, 1463
BstC8I GCNNGC 3 cut(s) 233, 939, 1304
BstDEI CTNAG 5 cut(s) 83, 689, 702, 1293, 1354
BstDSI CCRYGG 1 cut(s) 201
BstENI CCTNNNNNAGG 1 cut(s) 807
BstF5I GGATG 7 cut(s) 121, 292, 469, 760, 1326, 1521, 1929
BstH2I RGCGCY 1 cut(s) 825
BstHHI GCGC 2 cut(s) 250, 824
BstKTI GATC 5 cut(s) 796, 916, 1002, 1132, 1854
BstMAI GTCTC 2 cut(s) 22, 1400
BstMBI GATC 5 cut(s) 793, 913, 999, 1129, 1851
BstNI CCWGG 3 cut(s) 369, 1423, 1596
BstNSI RCATGY 4 cut(s) 941, 1036, 1306, 1313
BstPAI GACNNNNGTC 1 cut(s) 396
BstSCI CCNGG 3 cut(s) 367, 1421, 1594
BstSFI CTRYAG 2 cut(s) 129, 630
BstV1I GCAGC 4 cut(s) 308, 491, 616, 1373
BstV2I GAAGAC 1 cut(s) 591
BstX2I RGATCY 2 cut(s) 793, 913
BstYI RGATCY 2 cut(s) 793, 913
BsuRI GGCC 2 cut(s) 235, 734
BtgI CCRYGG 1 cut(s) 201
BtsCI GGATG 7 cut(s) 121, 292, 469, 760, 1326, 1521, 1929
BtsI GCAGTG 1 cut(s) 126
BtsIMutI CAGTG 5 cut(s) 126, 699, 748, 1707, 2003
BveI ACCTGC 1 cut(s) 14
Cac8I GCNNGC 3 cut(s) 233, 939, 1304
CaiI CAGNNNCTG 1 cut(s) 1595
CfoI GCGC 2 cut(s) 250, 824
Cfr13I GGNCC 4 cut(s) 170, 233, 812, 901
Csp6I GTAC 4 cut(s) 27, 499, 1079, 1539
CviQI GTAC 4 cut(s) 27, 499, 1079, 1539
DdeI CTNAG 5 cut(s) 83, 689, 702, 1293, 1354
DpnI GATC 5 cut(s) 795, 915, 1001, 1131, 1853
DpnII GATC 5 cut(s) 793, 913, 999, 1129, 1851
DraI TTTAAA 1 cut(s) 1440
DraIII CACNNNGTG 1 cut(s) 1463
Eam1104I CTCTTC 2 cut(s) 552, 1941
EarI CTCTTC 2 cut(s) 552, 1941
Eco130I CCWWGG 1 cut(s) 201
Eco32I GATATC 1 cut(s) 927
Eco47I GGWCC 3 cut(s) 170, 812, 901
Eco57I CTGAAG 3 cut(s) 165, 1563, 1683
Eco72I CACGTG 1 cut(s) 1463
EcoNI CCTNNNNNAGG 1 cut(s) 807
EcoO109I RGGNCCY 1 cut(s) 812
EcoRI GAATTC 1 cut(s) 1719
EcoRII CCWGG 3 cut(s) 367, 1421, 1594
EcoRV GATATC 1 cut(s) 927
EcoT14I CCWWGG 1 cut(s) 201
EcoT22I ATGCAT 3 cut(s) 665, 939, 943
ErhI CCWWGG 1 cut(s) 201
Esp3I CGTCTC 1 cut(s) 22
FalI AAGNNNNNCTT 2 cut(s) 306, 338
FaqI GGGAC 2 cut(s) 272, 798
FauI CCCGC 1 cut(s) 224
Fnu4HI GCNGC 5 cut(s) 297, 480, 630, 1362, 1812
FokI GGATG 7 cut(s) 128, 299, 456, 767, 1333, 1528, 1936
Fsp4HI GCNGC 5 cut(s) 297, 480, 630, 1362, 1812
FspBI CTAG 2 cut(s) 578, 1025
GlaI GCGC 2 cut(s) 249, 823
GluI GCNGC 5 cut(s) 297, 480, 630, 1362, 1812
HaeII RGCGCY 1 cut(s) 825
HaeIII GGCC 2 cut(s) 235, 734
HapII CCGG 1 cut(s) 236
HhaI GCGC 2 cut(s) 250, 824
Hin6I GCGC 2 cut(s) 248, 822
HinP1I GCGC 2 cut(s) 248, 822
HindIII AAGCTT 2 cut(s) 240, 1434
HinfI GANTC 3 cut(s) 344, 718, 972
HpaII CCGG 1 cut(s) 236
HphI GGTGA 2 cut(s) 1507, 1900
Hpy166II GTNNAC 1 cut(s) 2001
Hpy188I TCNGA 2 cut(s) 1097, 1669
Hpy188III TCNNGA 7 cut(s) 104, 143, 307, 427, 1025, 1217, 1633
Hpy8I GTNNAC 1 cut(s) 2001
HpyAV CCTTC 6 cut(s) 118, 966, 1025, 1176, 1492, 1496
HpyCH4III ACNGT 4 cut(s) 56, 1591, 1900, 1998
HpyCH4IV ACGT 4 cut(s) 63, 985, 1462, 1732
HpyF3I CTNAG 5 cut(s) 83, 689, 702, 1293, 1354
HpySE526I ACGT 4 cut(s) 63, 985, 1462, 1732
HspAI GCGC 2 cut(s) 248, 822
Kzo9I GATC 5 cut(s) 793, 913, 999, 1129, 1851
LmnI GCTCC 3 cut(s) 454, 1164, 1425
Lsp1109I GCAGC 4 cut(s) 308, 491, 616, 1373
LweI GCATC 6 cut(s) 106, 277, 564, 924, 1660, 1914
MaeI CTAG 2 cut(s) 578, 1025
MaeII ACGT 4 cut(s) 63, 985, 1462, 1732
MaeIII GTNAC 3 cut(s) 56, 389, 778
MalI GATC 5 cut(s) 795, 915, 1001, 1131, 1853
MboI GATC 5 cut(s) 793, 913, 999, 1129, 1851
MfeI CAATTG 2 cut(s) 30, 569
MflI RGATCY 2 cut(s) 793, 913
MhlI GDGCHC 1 cut(s) 1555
MlyI GAGTC 1 cut(s) 712
MmeI TCCRAC 2 cut(s) 590, 1323
MnlI CCTC 9 cut(s) 150, 180, 364, 574, 632, 1103, 1393, 1763, 1944
Mph1103I ATGCAT 3 cut(s) 665, 939, 943
MseI TTAA 5 cut(s) 48, 878, 882, 1395, 1439
MslI CAYNNNNRTG 4 cut(s) 474, 753, 1035, 1056
MspI CCGG 1 cut(s) 236
MspR9I CCNGG 3 cut(s) 369, 1423, 1596
MunI CAATTG 2 cut(s) 30, 569
Mva1269I GAATGC 4 cut(s) 202, 665, 1583, 1620
MvaI CCWGG 3 cut(s) 369, 1423, 1596
NcoI CCATGG 1 cut(s) 201
NdeII GATC 5 cut(s) 793, 913, 999, 1129, 1851
NlaIV GGNNCC 2 cut(s) 814, 1458
NmuCI GTSAC 2 cut(s) 389, 778
NsiI ATGCAT 3 cut(s) 665, 939, 943
NspI RCATGY 4 cut(s) 941, 1036, 1306, 1313
OliI CACNNNNGTG 1 cut(s) 1035
PacI TTAATTAA 1 cut(s) 882
PaeI GCATGC 2 cut(s) 941, 1306
PciI ACATGT 2 cut(s) 1032, 1309
PctI GAATGC 4 cut(s) 202, 665, 1583, 1620
PfeI GAWTC 2 cut(s) 344, 972
PkrI GCNGC 5 cut(s) 298, 481, 631, 1363, 1813
PleI GAGTC 1 cut(s) 712
PmaCI CACGTG 1 cut(s) 1463
PmlI CACGTG 1 cut(s) 1463
PpsI GAGTC 1 cut(s) 712
Ppu21I YACGTR 3 cut(s) 64, 986, 1463
PpuMI RGGWCCY 1 cut(s) 812
PscI ACATGT 2 cut(s) 1032, 1309
PshAI GACNNNNGTC 1 cut(s) 396
PshBI ATTAAT 2 cut(s) 878, 882
PsiI TTATAA 1 cut(s) 1242
Psp5II RGGWCCY 1 cut(s) 812
Psp6I CCWGG 3 cut(s) 367, 1421, 1594
PspCI CACGTG 1 cut(s) 1463
PspGI CCWGG 3 cut(s) 367, 1421, 1594
PspN4I GGNNCC 2 cut(s) 814, 1458
PspPI GGNCC 4 cut(s) 170, 233, 812, 901
PspPPI RGGWCCY 1 cut(s) 812
PsrI GAACNNNNNNTAC 2 cut(s) 395, 427
PstI CTGCAG 1 cut(s) 634
PstNI CAGNNNCTG 1 cut(s) 1595
PsuI RGATCY 2 cut(s) 793, 913
RsaI GTAC 4 cut(s) 28, 500, 1080, 1540
RsaNI GTAC 4 cut(s) 27, 499, 1079, 1539
RseI CAYNNNNRTG 4 cut(s) 474, 753, 1035, 1056
SaqAI TTAA 5 cut(s) 48, 878, 882, 1395, 1439
SatI GCNGC 5 cut(s) 297, 480, 630, 1362, 1812
Sau3AI GATC 5 cut(s) 793, 913, 999, 1129, 1851
Sau96I GGNCC 4 cut(s) 170, 233, 812, 901
SchI GAGTC 1 cut(s) 712
ScrFI CCNGG 3 cut(s) 369, 1423, 1596
SduI GDGCHC 1 cut(s) 1555
SfaNI GCATC 6 cut(s) 106, 277, 564, 924, 1660, 1914
SfcI CTRYAG 2 cut(s) 129, 630
SinI GGWCC 3 cut(s) 170, 812, 901
SmiMI CAYNNNNRTG 4 cut(s) 474, 753, 1035, 1056
SmlI CTYRAG 1 cut(s) 102
SmoI CTYRAG 1 cut(s) 102
SphI GCATGC 2 cut(s) 941, 1306
SsiI CCGC 4 cut(s) 21, 231, 979, 1812
SspI AATATT 1 cut(s) 1977
SspMI CTAG 2 cut(s) 578, 1025
StyD4I CCNGG 3 cut(s) 367, 1421, 1594
StyI CCWWGG 1 cut(s) 201
TaaI ACNGT 4 cut(s) 56, 1591, 1900, 1998
TaiI ACGT 4 cut(s) 66, 988, 1465, 1735
TaqI TCGA 4 cut(s) 789, 1174, 1268, 1980
TatI WGTACW 2 cut(s) 1078, 1538
TauI GCSGC 1 cut(s) 1814
TfiI GAWTC 2 cut(s) 344, 972
Tru1I TTAA 5 cut(s) 48, 878, 882, 1395, 1439
Tru9I TTAA 5 cut(s) 48, 878, 882, 1395, 1439
TscAI CASTG 5 cut(s) 126, 706, 748, 1707, 2003
TseFI GTSAC 2 cut(s) 389, 778
TseI GCWGC 4 cut(s) 296, 479, 629, 1361
Tsp45I GTSAC 2 cut(s) 389, 778
TspDTI ATGAA 8 cut(s) 150, 165, 1007, 1098, 1532, 1623, 1834, 1942
TspGWI ACGGA 6 cut(s) 162, 386, 486, 752, 766, 1627
TspRI CASTG 5 cut(s) 126, 706, 748, 1707, 2003
VpaK11BI GGWCC 3 cut(s) 170, 812, 901
VspI ATTAAT 2 cut(s) 878, 882
XagI CCTNNNNNAGG 1 cut(s) 807
XapI RAATTY 6 cut(s) 222, 275, 492, 857, 1020, 1719
XbaI TCTAGA 1 cut(s) 1024
XceI RCATGY 4 cut(s) 941, 1036, 1306, 1313
XcmI CCANNNNNNNNNTGG 1 cut(s) 1158
XspI CTAG 2 cut(s) 578, 1025
Zsp2I ATGCAT 3 cut(s) 665, 939, 943
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.