protein ubiquitination
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 329 |
| AccB1I | GGYRCC | 1 cut(s) | 233 |
| AccII | CGCG | 1 cut(s) | 570 |
| AccIII | TCCGGA | 1 cut(s) | 45 |
| AciI | CCGC | 4 cut(s) | 157, 306, 1086, 1564 |
| AclWI | GGATC | 3 cut(s) | 37, 80, 397 |
| AcoI | YGGCCR | 4 cut(s) | 204, 345, 1014, 1540 |
| AcsI | RAATTY | 3 cut(s) | 514, 596, 1928 |
| AcuI | CTGAAG | 1 cut(s) | 2061 |
| AfaI | GTAC | 4 cut(s) | 613, 727, 1200, 1840 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 52, 456, 491, 625, 1012, 2220 |
| AflII | CTTAAG | 1 cut(s) | 1081 |
| AflIII | ACRYGT | 1 cut(s) | 1333 |
| AjiI | CACGTC | 1 cut(s) | 2028 |
| AjnI | CCWGG | 4 cut(s) | 385, 624, 1542, 1894 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 113, 145 |
| AluBI | AGCT | 3 cut(s) | 103, 731, 1461 |
| AluI | AGCT | 3 cut(s) | 103, 731, 1461 |
| Alw21I | GWGCWC | 1 cut(s) | 1855 |
| Alw26I | GTCTC | 1 cut(s) | 1190 |
| AlwI | GGATC | 3 cut(s) | 37, 80, 397 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 392, 1895 |
| Aor13HI | TCCGGA | 1 cut(s) | 45 |
| AoxI | GGCC | 6 cut(s) | 204, 345, 482, 1014, 1540, 2083 |
| ApaI | GGGCCC | 1 cut(s) | 486 |
| ApeKI | GCWGC | 5 cut(s) | 1355, 1370, 1475, 1877, 1880 |
| ApoI | RAATTY | 3 cut(s) | 514, 596, 1928 |
| AseI | ATTAAT | 2 cut(s) | 743, 1155 |
| AspLEI | GCGC | 2 cut(s) | 660, 938 |
| AspS9I | GGNCC | 3 cut(s) | 482, 483, 494 |
| AsuHPI | GGTGA | 5 cut(s) | 121, 614, 956, 2083, 2101 |
| AvaII | GGWCC | 1 cut(s) | 494 |
| BaeGI | GKGCMC | 2 cut(s) | 486, 2140 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1320, 1353 |
| BanI | GGYRCC | 1 cut(s) | 233 |
| BanII | GRGCYC | 1 cut(s) | 486 |
| BauI | CACGAG | 1 cut(s) | 1761 |
| BbsI | GAAGAC | 3 cut(s) | 10, 702, 1913 |
| Bbv12I | GWGCWC | 1 cut(s) | 1855 |
| BbvI | GCAGC | 5 cut(s) | 1357, 1367, 1462, 1864, 1892 |
| BccI | CCATC | 4 cut(s) | 926, 1028, 1683, 1696 |
| BceAI | ACGGC | 4 cut(s) | 360, 622, 1001, 1555 |
| BciT130I | CCWGG | 4 cut(s) | 387, 626, 1544, 1896 |
| BciVI | GTATCC | 2 cut(s) | 450, 765 |
| BclI | TGATCA | 1 cut(s) | 1645 |
| BcoDI | GTCTC | 1 cut(s) | 1190 |
| BfaI | CTAG | 5 cut(s) | 456, 489, 1062, 1616, 2196 |
| BfmI | CTRYAG | 3 cut(s) | 649, 1371, 1878 |
| BfoI | RGCGCY | 1 cut(s) | 939 |
| BfrI | CTTAAG | 1 cut(s) | 1081 |
| BfuI | GTATCC | 2 cut(s) | 450, 765 |
| BglII | AGATCT | 1 cut(s) | 211 |
| BisI | GCNGC | 5 cut(s) | 1356, 1371, 1476, 1878, 1881 |
| BlsI | GCNGC | 5 cut(s) | 1357, 1372, 1477, 1879, 1882 |
| Bme1390I | CCNGG | 4 cut(s) | 387, 626, 1544, 1896 |
| Bme18I | GGWCC | 1 cut(s) | 494 |
| BmgBI | CACGTC | 1 cut(s) | 2028 |
| BmgT120I | GGNCC | 3 cut(s) | 482, 483, 494 |
| BmiI | GGNNCC | 2 cut(s) | 235, 484 |
| BmrFI | CCNGG | 4 cut(s) | 387, 626, 1544, 1896 |
| BmrI | ACTGGG | 1 cut(s) | 593 |
| BmsI | GCATC | 6 cut(s) | 137, 352, 1266, 1960, 2214, 2316 |
| BmuI | ACTGGG | 1 cut(s) | 593 |
| BpiI | GAAGAC | 3 cut(s) | 10, 702, 1913 |
| Bsa29I | ATCGAT | 1 cut(s) | 397 |
| BsaJI | CCNNGG | 2 cut(s) | 342, 1522 |
| BsaWI | WCCGGW | 1 cut(s) | 45 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 52, 456, 491, 625, 1012, 2220 |
| Bse118I | RCCGGY | 1 cut(s) | 1092 |
| Bse1I | ACTGG | 3 cut(s) | 588, 1294, 2204 |
| Bse3DI | GCAATG | 1 cut(s) | 2234 |
| BseAI | TCCGGA | 1 cut(s) | 45 |
| BseBI | CCWGG | 4 cut(s) | 387, 626, 1544, 1896 |
| BseCI | ATCGAT | 1 cut(s) | 397 |
| BseDI | CCNNGG | 2 cut(s) | 342, 1522 |
| BseGI | GGATG | 8 cut(s) | 128, 277, 316, 367, 1500, 1975, 2229, 2307 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 52, 456, 491, 625, 1012, 2220 |
| BseMI | GCAATG | 1 cut(s) | 2234 |
| BseMII | CTCAG | 2 cut(s) | 846, 1209 |
| BseNI | ACTGG | 3 cut(s) | 588, 1294, 2204 |
| BseRI | GAGGAG | 1 cut(s) | 1594 |
| BseSI | GKGCMC | 2 cut(s) | 486, 2140 |
| BseXI | GCAGC | 5 cut(s) | 1357, 1367, 1462, 1864, 1892 |
| BsgI | GTGCAG | 1 cut(s) | 1680 |
| Bsh1236I | CGCG | 1 cut(s) | 570 |
| BshFI | GGCC | 6 cut(s) | 206, 347, 484, 1016, 1542, 2085 |
| BshNI | GGYRCC | 1 cut(s) | 233 |
| BshVI | ATCGAT | 1 cut(s) | 397 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1855 |
| BsiSI | CCGG | 2 cut(s) | 46, 1093 |
| BslFI | GGGAC | 2 cut(s) | 233, 1580 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 52, 456, 491, 625, 1012, 2220 |
| BsmAI | GTCTC | 1 cut(s) | 1190 |
| BsmFI | GGGAC | 2 cut(s) | 233, 1580 |
| BsmI | GAATGC | 5 cut(s) | 660, 1076, 1566, 1883, 2019 |
| BsnI | GGCC | 6 cut(s) | 206, 347, 484, 1016, 1542, 2085 |
| Bsp120I | GGGCCC | 1 cut(s) | 482 |
| Bsp1286I | GDGCHC | 3 cut(s) | 486, 1855, 2140 |
| Bsp13I | TCCGGA | 1 cut(s) | 45 |
| Bsp1407I | TGTACA | 1 cut(s) | 1838 |
| Bsp68I | TCGCGA | 1 cut(s) | 570 |
| BspACI | CCGC | 4 cut(s) | 157, 306, 1086, 1564 |
| BspANI | GGCC | 6 cut(s) | 206, 347, 484, 1016, 1542, 2085 |
| BspCNI | CTCAG | 2 cut(s) | 847, 1208 |
| BspDI | ATCGAT | 1 cut(s) | 397 |
| BspEI | TCCGGA | 1 cut(s) | 45 |
| BspFNI | CGCG | 1 cut(s) | 570 |
| BspLI | GGNNCC | 2 cut(s) | 235, 484 |
| BspMAI | CTGCAG | 3 cut(s) | 653, 1375, 1882 |
| BspPI | GGATC | 3 cut(s) | 37, 80, 397 |
| BspT107I | GGYRCC | 1 cut(s) | 233 |
| BspTI | CTTAAG | 1 cut(s) | 1081 |
| BsrDI | GCAATG | 1 cut(s) | 2234 |
| BsrFI | RCCGGY | 1 cut(s) | 1092 |
| BsrGI | TGTACA | 1 cut(s) | 1838 |
| BsrI | ACTGG | 3 cut(s) | 588, 1294, 2204 |
| BssAI | RCCGGY | 1 cut(s) | 1092 |
| BssECI | CCNNGG | 2 cut(s) | 342, 1522 |
| BssSI | CACGAG | 1 cut(s) | 1761 |
| BssT1I | CCWWGG | 1 cut(s) | 1522 |
| Bst2BI | CACGAG | 1 cut(s) | 1761 |
| Bst2UI | CCWGG | 4 cut(s) | 387, 626, 1544, 1896 |
| Bst4CI | ACNGT | 5 cut(s) | 509, 1070, 1127, 1843, 1891 |
| Bst6I | CTCTTC | 2 cut(s) | 1149, 2102 |
| BstAFI | CTTAAG | 1 cut(s) | 1081 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 362 |
| BstAUI | TGTACA | 1 cut(s) | 1838 |
| BstC8I | GCNNGC | 3 cut(s) | 886, 1094, 2193 |
| BstDEI | CTNAG | 5 cut(s) | 537, 855, 1048, 1195, 1430 |
| BstDSI | CCRYGG | 1 cut(s) | 342 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 623 |
| BstF5I | GGATG | 8 cut(s) | 128, 277, 316, 367, 1500, 1975, 2229, 2307 |
| BstFNI | CGCG | 1 cut(s) | 570 |
| BstH2I | RGCGCY | 1 cut(s) | 939 |
| BstHHI | GCGC | 2 cut(s) | 660, 938 |
| BstMAI | GTCTC | 1 cut(s) | 1190 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 287, 353, 362, 657 |
| BstNI | CCWGG | 4 cut(s) | 387, 626, 1544, 1896 |
| BstNSI | RCATGY | 2 cut(s) | 1337, 1388 |
| BstSCI | CCNGG | 4 cut(s) | 385, 624, 1542, 1894 |
| BstSFI | CTRYAG | 3 cut(s) | 649, 1371, 1878 |
| BstSLI | GKGCMC | 2 cut(s) | 486, 2140 |
| BstUI | CGCG | 1 cut(s) | 570 |
| BstV1I | GCAGC | 5 cut(s) | 1357, 1367, 1462, 1864, 1892 |
| BstV2I | GAAGAC | 3 cut(s) | 10, 702, 1913 |
| BstX2I | RGATCY | 3 cut(s) | 42, 211, 389 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 784 |
| BstYI | RGATCY | 3 cut(s) | 42, 211, 389 |
| Bsu15I | ATCGAT | 1 cut(s) | 397 |
| BsuI | GTATCC | 2 cut(s) | 450, 765 |
| BsuRI | GGCC | 6 cut(s) | 206, 347, 484, 1016, 1542, 2085 |
| BsuTUI | ATCGAT | 1 cut(s) | 397 |
| BtgI | CCRYGG | 1 cut(s) | 342 |
| BtrI | CACGTC | 1 cut(s) | 2028 |
| BtsCI | GGATG | 8 cut(s) | 128, 277, 316, 367, 1500, 1975, 2229, 2307 |
| BtsI | GCAGTG | 1 cut(s) | 903 |
| BtsIMutI | CAGTG | 1 cut(s) | 903 |
| BtuMI | TCGCGA | 1 cut(s) | 570 |
| Cac8I | GCNNGC | 3 cut(s) | 886, 1094, 2193 |
| CaiI | CAGNNNCTG | 2 cut(s) | 392, 1895 |
| CfoI | GCGC | 2 cut(s) | 660, 938 |
| Cfr10I | RCCGGY | 1 cut(s) | 1092 |
| Cfr13I | GGNCC | 3 cut(s) | 482, 483, 494 |
| ClaI | ATCGAT | 1 cut(s) | 397 |
| CseI | GACGC | 2 cut(s) | 362, 453 |
| Csp6I | GTAC | 4 cut(s) | 612, 726, 1199, 1839 |
| CviQI | GTAC | 4 cut(s) | 612, 726, 1199, 1839 |
| DdeI | CTNAG | 5 cut(s) | 537, 855, 1048, 1195, 1430 |
| EaeI | YGGCCR | 4 cut(s) | 204, 345, 1014, 1540 |
| Eam1104I | CTCTTC | 2 cut(s) | 1149, 2102 |
| EarI | CTCTTC | 2 cut(s) | 1149, 2102 |
| Eco130I | CCWWGG | 1 cut(s) | 1522 |
| Eco147I | AGGCCT | 1 cut(s) | 2085 |
| Eco24I | GRGCYC | 1 cut(s) | 486 |
| Eco47I | GGWCC | 1 cut(s) | 494 |
| Eco57I | CTGAAG | 1 cut(s) | 2061 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 623 |
| EcoO109I | RGGNCCY | 2 cut(s) | 482, 494 |
| EcoRII | CCWGG | 4 cut(s) | 385, 624, 1542, 1894 |
| EcoT14I | CCWWGG | 1 cut(s) | 1522 |
| EcoT22I | ATGCAT | 2 cut(s) | 1281, 1717 |
| EcoT38I | GRGCYC | 1 cut(s) | 486 |
| ErhI | CCWWGG | 1 cut(s) | 1522 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 683, 715 |
| FaqI | GGGAC | 2 cut(s) | 233, 1580 |
| FauI | CCCGC | 2 cut(s) | 299, 1557 |
| FbaI | TGATCA | 1 cut(s) | 1645 |
| Fnu4HI | GCNGC | 5 cut(s) | 1356, 1371, 1476, 1878, 1881 |
| FokI | GGATG | 8 cut(s) | 115, 284, 323, 374, 1487, 1982, 2236, 2294 |
| FriOI | GRGCYC | 1 cut(s) | 486 |
| Fsp4HI | GCNGC | 5 cut(s) | 1356, 1371, 1476, 1878, 1881 |
| FspBI | CTAG | 5 cut(s) | 456, 489, 1062, 1616, 2196 |
| GlaI | GCGC | 2 cut(s) | 659, 937 |
| GluI | GCNGC | 5 cut(s) | 1356, 1371, 1476, 1878, 1881 |
| HaeII | RGCGCY | 1 cut(s) | 939 |
| HaeIII | GGCC | 6 cut(s) | 206, 347, 484, 1016, 1542, 2085 |
| HapII | CCGG | 2 cut(s) | 46, 1093 |
| HgaI | GACGC | 2 cut(s) | 362, 453 |
| HhaI | GCGC | 2 cut(s) | 660, 938 |
| Hin6I | GCGC | 2 cut(s) | 658, 936 |
| HinP1I | GCGC | 2 cut(s) | 658, 936 |
| HinfI | GANTC | 7 cut(s) | 6, 680, 994, 1183, 1228, 1421, 1586 |
| HpaII | CCGG | 2 cut(s) | 46, 1093 |
| HphI | GGTGA | 5 cut(s) | 121, 614, 956, 2083, 2101 |
| Hpy166II | GTNNAC | 1 cut(s) | 1211 |
| Hpy188I | TCNGA | 8 cut(s) | 186, 394, 469, 1217, 1458, 1555, 1969, 2041 |
| Hpy188III | TCNNGA | 7 cut(s) | 46, 295, 569, 758, 1348, 1730, 2221 |
| Hpy8I | GTNNAC | 1 cut(s) | 1211 |
| Hpy99I | CGWCG | 1 cut(s) | 469 |
| HpyAV | CCTTC | 9 cut(s) | 224, 262, 582, 602, 629, 662, 1345, 1813, 2224 |
| HpyCH4III | ACNGT | 5 cut(s) | 509, 1070, 1127, 1843, 1891 |
| HpyCH4IV | ACGT | 2 cut(s) | 2027, 2032 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 287, 353, 362, 657 |
| HpyF3I | CTNAG | 5 cut(s) | 537, 855, 1048, 1195, 1430 |
| HpySE526I | ACGT | 2 cut(s) | 2027, 2032 |
| HspAI | GCGC | 2 cut(s) | 658, 936 |
| Kpn2I | TCCGGA | 1 cut(s) | 45 |
| KroI | GCCGGC | 1 cut(s) | 1092 |
| KroNI | GCCGGC | 1 cut(s) | 1094 |
| Ksp22I | TGATCA | 1 cut(s) | 1645 |
| LmnI | GCTCC | 1 cut(s) | 87 |
| Lsp1109I | GCAGC | 5 cut(s) | 1357, 1367, 1462, 1864, 1892 |
| LweI | GCATC | 6 cut(s) | 137, 352, 1266, 1960, 2214, 2316 |
| MaeI | CTAG | 5 cut(s) | 456, 489, 1062, 1616, 2196 |
| MaeII | ACGT | 2 cut(s) | 2027, 2032 |
| MfeI | CAATTG | 2 cut(s) | 426, 1010 |
| MflI | RGATCY | 3 cut(s) | 42, 211, 389 |
| MhlI | GDGCHC | 3 cut(s) | 486, 1855, 2140 |
| MlyI | GAGTC | 3 cut(s) | 689, 1192, 1430 |
| MmeI | TCCRAC | 1 cut(s) | 447 |
| Mph1103I | ATGCAT | 2 cut(s) | 1281, 1717 |
| MroI | TCCGGA | 1 cut(s) | 45 |
| MroNI | GCCGGC | 1 cut(s) | 1092 |
| MseI | TTAA | 9 cut(s) | 153, 372, 408, 743, 1082, 1155, 1440, 2289, 2359 |
| MslI | CAYNNNNRTG | 5 cut(s) | 1407, 1868, 2072, 2114, 2222 |
| MspCI | CTTAAG | 1 cut(s) | 1081 |
| MspI | CCGG | 2 cut(s) | 46, 1093 |
| MspR9I | CCNGG | 4 cut(s) | 387, 626, 1544, 1896 |
| MunI | CAATTG | 2 cut(s) | 426, 1010 |
| Mva1269I | GAATGC | 5 cut(s) | 660, 1076, 1566, 1883, 2019 |
| MvaI | CCWGG | 4 cut(s) | 387, 626, 1544, 1896 |
| MvnI | CGCG | 1 cut(s) | 570 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 287, 353, 362, 657 |
| NaeI | GCCGGC | 1 cut(s) | 1094 |
| NgoMIV | GCCGGC | 1 cut(s) | 1092 |
| NlaIV | GGNNCC | 2 cut(s) | 235, 484 |
| NmuCI | GTSAC | 6 cut(s) | 190, 962, 1163, 1487, 1861, 2028 |
| NruI | TCGCGA | 1 cut(s) | 570 |
| NsiI | ATGCAT | 2 cut(s) | 1281, 1717 |
| NspI | RCATGY | 2 cut(s) | 1337, 1388 |
| PceI | AGGCCT | 1 cut(s) | 2085 |
| PciI | ACATGT | 1 cut(s) | 1333 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1555 |
| PctI | GAATGC | 5 cut(s) | 660, 1076, 1566, 1883, 2019 |
| PdiI | GCCGGC | 1 cut(s) | 1094 |
| PfeI | GAWTC | 4 cut(s) | 6, 994, 1228, 1586 |
| PflFI | GACNNNGTC | 1 cut(s) | 224 |
| PkrI | GCNGC | 5 cut(s) | 1357, 1372, 1477, 1879, 1882 |
| PleI | GAGTC | 3 cut(s) | 688, 1191, 1429 |
| PpsI | GAGTC | 3 cut(s) | 688, 1191, 1429 |
| PpuMI | RGGWCCY | 1 cut(s) | 494 |
| PscI | ACATGT | 1 cut(s) | 1333 |
| PshBI | ATTAAT | 2 cut(s) | 743, 1155 |
| PsiI | TTATAA | 1 cut(s) | 329 |
| Psp5II | RGGWCCY | 1 cut(s) | 494 |
| Psp6I | CCWGG | 4 cut(s) | 385, 624, 1542, 1894 |
| PspGI | CCWGG | 4 cut(s) | 385, 624, 1542, 1894 |
| PspN4I | GGNNCC | 2 cut(s) | 235, 484 |
| PspOMI | GGGCCC | 1 cut(s) | 482 |
| PspPI | GGNCC | 3 cut(s) | 482, 483, 494 |
| PspPPI | RGGWCCY | 1 cut(s) | 494 |
| PstI | CTGCAG | 3 cut(s) | 653, 1375, 1882 |
| PstNI | CAGNNNCTG | 2 cut(s) | 392, 1895 |
| PsuI | RGATCY | 3 cut(s) | 42, 211, 389 |
| PsyI | GACNNNGTC | 1 cut(s) | 224 |
| RruI | TCGCGA | 1 cut(s) | 570 |
| RsaI | GTAC | 4 cut(s) | 613, 727, 1200, 1840 |
| RsaNI | GTAC | 4 cut(s) | 612, 726, 1199, 1839 |
| RseI | CAYNNNNRTG | 5 cut(s) | 1407, 1868, 2072, 2114, 2222 |
| SaqAI | TTAA | 9 cut(s) | 153, 372, 408, 743, 1082, 1155, 1440, 2289, 2359 |
| SatI | GCNGC | 5 cut(s) | 1356, 1371, 1476, 1878, 1881 |
| Sau96I | GGNCC | 3 cut(s) | 482, 483, 494 |
| SchI | GAGTC | 3 cut(s) | 689, 1192, 1430 |
| ScrFI | CCNGG | 4 cut(s) | 387, 626, 1544, 1896 |
| SduI | GDGCHC | 3 cut(s) | 486, 1855, 2140 |
| SfaNI | GCATC | 6 cut(s) | 137, 352, 1266, 1960, 2214, 2316 |
| SfcI | CTRYAG | 3 cut(s) | 649, 1371, 1878 |
| SinI | GGWCC | 1 cut(s) | 494 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 1407, 1868, 2072, 2114, 2222 |
| SmlI | CTYRAG | 1 cut(s) | 1081 |
| SmoI | CTYRAG | 1 cut(s) | 1081 |
| SseBI | AGGCCT | 1 cut(s) | 2085 |
| SsiI | CCGC | 4 cut(s) | 157, 306, 1086, 1564 |
| SspMI | CTAG | 5 cut(s) | 456, 489, 1062, 1616, 2196 |
| StuI | AGGCCT | 1 cut(s) | 2085 |
| StyD4I | CCNGG | 4 cut(s) | 385, 624, 1542, 1894 |
| StyI | CCWWGG | 1 cut(s) | 1522 |
| TaaI | ACNGT | 5 cut(s) | 509, 1070, 1127, 1843, 1891 |
| TaiI | ACGT | 2 cut(s) | 2030, 2035 |
| TaqI | TCGA | 9 cut(s) | 114, 228, 397, 849, 1255, 1549, 1558, 1654, 2334 |
| TatI | WGTACW | 1 cut(s) | 1838 |
| TfiI | GAWTC | 4 cut(s) | 6, 994, 1228, 1586 |
| Tru1I | TTAA | 9 cut(s) | 153, 372, 408, 743, 1082, 1155, 1440, 2289, 2359 |
| Tru9I | TTAA | 9 cut(s) | 153, 372, 408, 743, 1082, 1155, 1440, 2289, 2359 |
| TscAI | CASTG | 1 cut(s) | 910 |
| TseFI | GTSAC | 6 cut(s) | 190, 962, 1163, 1487, 1861, 2028 |
| TseI | GCWGC | 5 cut(s) | 1355, 1370, 1475, 1877, 1880 |
| Tsp45I | GTSAC | 6 cut(s) | 190, 962, 1163, 1487, 1861, 2028 |
| TspDTI | ATGAA | 7 cut(s) | 447, 591, 1173, 1832, 1921, 1923, 2206 |
| TspGWI | ACGGA | 1 cut(s) | 1790 |
| TspRI | CASTG | 1 cut(s) | 910 |
| Tth111I | GACNNNGTC | 1 cut(s) | 224 |
| Vha464I | CTTAAG | 1 cut(s) | 1081 |
| VpaK11BI | GGWCC | 1 cut(s) | 494 |
| VspI | ATTAAT | 2 cut(s) | 743, 1155 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 623 |
| XapI | RAATTY | 3 cut(s) | 514, 596, 1928 |
| XceI | RCATGY | 2 cut(s) | 1337, 1388 |
| XspI | CTAG | 5 cut(s) | 456, 489, 1062, 1616, 2196 |
| Zsp2I | ATGCAT | 2 cut(s) | 1281, 1717 |