protein ubiquitination
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 98 |
| AasI | GACNNNNNNGTC | 2 cut(s) | 592, 1018 |
| AccI | GTMKAC | 1 cut(s) | 1022 |
| AciI | CCGC | 1 cut(s) | 519 |
| AclWI | GGATC | 2 cut(s) | 12, 941 |
| AcsI | RAATTY | 3 cut(s) | 408, 483, 1052 |
| AcuI | CTGAAG | 1 cut(s) | 744 |
| AcvI | CACGTG | 1 cut(s) | 524 |
| AfaI | GTAC | 3 cut(s) | 115, 474, 601 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 862 |
| AgsI | TTSAA | 6 cut(s) | 266, 308, 413, 446, 960, 1057 |
| AjnI | CCWGG | 2 cut(s) | 655, 1033 |
| AluBI | AGCT | 3 cut(s) | 158, 442, 494 |
| AluI | AGCT | 3 cut(s) | 158, 442, 494 |
| Alw21I | GWGCWC | 1 cut(s) | 616 |
| Alw26I | GTCTC | 1 cut(s) | 1004 |
| AlwI | GGATC | 2 cut(s) | 12, 941 |
| AoxI | GGCC | 1 cut(s) | 844 |
| ApoI | RAATTY | 3 cut(s) | 408, 483, 1052 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 707 |
| AspS9I | GGNCC | 1 cut(s) | 1031 |
| AsuHPI | GGTGA | 2 cut(s) | 616, 844 |
| AvaII | GGWCC | 1 cut(s) | 1031 |
| BaeGI | GKGCMC | 1 cut(s) | 901 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 636, 668 |
| BbrPI | CACGTG | 1 cut(s) | 524 |
| Bbv12I | GWGCWC | 1 cut(s) | 616 |
| BccI | CCATC | 4 cut(s) | 79, 104, 635, 874 |
| BceAI | ACGGC | 2 cut(s) | 413, 603 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 555, 589 |
| BciT130I | CCWGG | 2 cut(s) | 657, 1035 |
| BcoDI | GTCTC | 1 cut(s) | 1004 |
| BfaI | CTAG | 3 cut(s) | 401, 470, 1069 |
| BfmI | CTRYAG | 2 cut(s) | 159, 639 |
| Bme1390I | CCNGG | 2 cut(s) | 657, 1035 |
| Bme18I | GGWCC | 1 cut(s) | 1031 |
| BmgT120I | GGNCC | 1 cut(s) | 1031 |
| BmrFI | CCNGG | 2 cut(s) | 657, 1035 |
| BmsI | GCATC | 1 cut(s) | 978 |
| Bsa29I | ATCGAT | 1 cut(s) | 575 |
| BsaAI | YACGTR | 1 cut(s) | 524 |
| BsaJI | CCNNGG | 1 cut(s) | 1061 |
| BsaWI | WCCGGW | 1 cut(s) | 685 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 862 |
| Bse1I | ACTGG | 2 cut(s) | 132, 968 |
| BseBI | CCWGG | 2 cut(s) | 657, 1035 |
| BseCI | ATCGAT | 1 cut(s) | 575 |
| BseDI | CCNNGG | 1 cut(s) | 1061 |
| BseGI | GGATG | 3 cut(s) | 90, 818, 993 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 862 |
| BseMII | CTCAG | 2 cut(s) | 168, 935 |
| BseNI | ACTGG | 2 cut(s) | 132, 968 |
| BseRI | GAGGAG | 1 cut(s) | 992 |
| BseSI | GKGCMC | 1 cut(s) | 901 |
| BshFI | GGCC | 1 cut(s) | 846 |
| BshVI | ATCGAT | 1 cut(s) | 575 |
| BsiHKAI | GWGCWC | 1 cut(s) | 616 |
| BsiSI | CCGG | 1 cut(s) | 686 |
| BslFI | GGGAC | 1 cut(s) | 598 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 862 |
| BsmAI | GTCTC | 1 cut(s) | 1004 |
| BsmFI | GGGAC | 1 cut(s) | 598 |
| BsmI | GAATGC | 1 cut(s) | 681 |
| BsnI | GGCC | 1 cut(s) | 846 |
| Bsp1286I | GDGCHC | 2 cut(s) | 616, 901 |
| Bsp1407I | TGTACA | 1 cut(s) | 599 |
| Bsp143I | GATC | 3 cut(s) | 4, 403, 933 |
| BspACI | CCGC | 1 cut(s) | 519 |
| BspANI | GGCC | 1 cut(s) | 846 |
| BspCNI | CTCAG | 2 cut(s) | 169, 936 |
| BspDI | ATCGAT | 1 cut(s) | 575 |
| BspPI | GGATC | 2 cut(s) | 12, 941 |
| BsrGI | TGTACA | 1 cut(s) | 599 |
| BsrI | ACTGG | 2 cut(s) | 132, 968 |
| BssECI | CCNNGG | 1 cut(s) | 1061 |
| BssMI | GATC | 3 cut(s) | 4, 403, 933 |
| BssT1I | CCWWGG | 1 cut(s) | 1061 |
| Bst2UI | CCWGG | 2 cut(s) | 657, 1035 |
| Bst4CI | ACNGT | 2 cut(s) | 302, 604 |
| BstAUI | TGTACA | 1 cut(s) | 599 |
| BstBAI | YACGTR | 1 cut(s) | 524 |
| BstC8I | GCNNGC | 2 cut(s) | 174, 362 |
| BstDEI | CTNAG | 3 cut(s) | 177, 537, 944 |
| BstF5I | GGATG | 3 cut(s) | 90, 818, 993 |
| BstKTI | GATC | 3 cut(s) | 7, 406, 936 |
| BstMAI | GTCTC | 1 cut(s) | 1004 |
| BstMBI | GATC | 3 cut(s) | 4, 403, 933 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 872 |
| BstNI | CCWGG | 2 cut(s) | 657, 1035 |
| BstNSI | RCATGY | 2 cut(s) | 176, 364 |
| BstSCI | CCNGG | 2 cut(s) | 655, 1033 |
| BstSFI | CTRYAG | 2 cut(s) | 159, 639 |
| BstSLI | GKGCMC | 1 cut(s) | 901 |
| BstX2I | RGATCY | 1 cut(s) | 4 |
| BstYI | RGATCY | 1 cut(s) | 4 |
| Bsu15I | ATCGAT | 1 cut(s) | 575 |
| BsuRI | GGCC | 1 cut(s) | 846 |
| BsuTUI | ATCGAT | 1 cut(s) | 575 |
| BtsCI | GGATG | 3 cut(s) | 90, 818, 993 |
| BtsIMutI | CAGTG | 2 cut(s) | 125, 975 |
| Cac8I | GCNNGC | 2 cut(s) | 174, 362 |
| Cfr13I | GGNCC | 1 cut(s) | 1031 |
| ClaI | ATCGAT | 1 cut(s) | 575 |
| Csp6I | GTAC | 3 cut(s) | 114, 473, 600 |
| CviAII | CATG | 7 cut(s) | 173, 361, 631, 712, 917, 930, 1018 |
| CviJI | RGCY | 6 cut(s) | 158, 400, 442, 494, 846, 866 |
| CviKI_1 | RGCY | 6 cut(s) | 158, 400, 442, 494, 846, 866 |
| CviQI | GTAC | 3 cut(s) | 114, 473, 600 |
| DdeI | CTNAG | 3 cut(s) | 177, 537, 944 |
| DpnI | GATC | 3 cut(s) | 6, 405, 935 |
| DpnII | GATC | 3 cut(s) | 4, 403, 933 |
| DraI | TTTAAA | 1 cut(s) | 370 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 592, 1018 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 592, 1018 |
| Eco130I | CCWWGG | 1 cut(s) | 1061 |
| Eco147I | AGGCCT | 1 cut(s) | 846 |
| Eco47I | GGWCC | 1 cut(s) | 1031 |
| Eco57I | CTGAAG | 1 cut(s) | 744 |
| Eco72I | CACGTG | 1 cut(s) | 524 |
| EcoRII | CCWGG | 2 cut(s) | 655, 1033 |
| EcoT14I | CCWWGG | 1 cut(s) | 1061 |
| ErhI | CCWWGG | 1 cut(s) | 1061 |
| FaeI | CATG | 7 cut(s) | 176, 364, 634, 715, 920, 933, 1021 |
| FaqI | GGGAC | 1 cut(s) | 598 |
| FatI | CATG | 7 cut(s) | 172, 360, 630, 711, 916, 929, 1017 |
| FblI | GTMKAC | 1 cut(s) | 1022 |
| FokI | GGATG | 3 cut(s) | 97, 805, 1000 |
| FspBI | CTAG | 3 cut(s) | 401, 470, 1069 |
| HaeIII | GGCC | 1 cut(s) | 846 |
| HapII | CCGG | 1 cut(s) | 686 |
| Hin1II | CATG | 7 cut(s) | 176, 364, 634, 715, 920, 933, 1021 |
| HinfI | GANTC | 6 cut(s) | 24, 73, 327, 466, 509, 541 |
| HpaII | CCGG | 1 cut(s) | 686 |
| HphI | GGTGA | 2 cut(s) | 616, 844 |
| Hpy166II | GTNNAC | 3 cut(s) | 116, 527, 1023 |
| Hpy188I | TCNGA | 3 cut(s) | 155, 481, 945 |
| Hpy188III | TCNNGA | 4 cut(s) | 107, 275, 488, 1009 |
| Hpy8I | GTNNAC | 3 cut(s) | 116, 527, 1023 |
| HpyAV | CCTTC | 3 cut(s) | 317, 486, 553 |
| HpyCH4III | ACNGT | 2 cut(s) | 302, 604 |
| HpyCH4IV | ACGT | 4 cut(s) | 132, 523, 593, 793 |
| HpyCH4V | TGCA | 6 cut(s) | 125, 198, 419, 427, 728, 991 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 872 |
| HpyF3I | CTNAG | 3 cut(s) | 177, 537, 944 |
| HpySE526I | ACGT | 4 cut(s) | 132, 523, 593, 793 |
| Hsp92II | CATG | 7 cut(s) | 176, 364, 634, 715, 920, 933, 1021 |
| Kzo9I | GATC | 3 cut(s) | 4, 403, 933 |
| LweI | GCATC | 1 cut(s) | 978 |
| MaeI | CTAG | 3 cut(s) | 401, 470, 1069 |
| MaeII | ACGT | 4 cut(s) | 132, 523, 593, 793 |
| MaeIII | GTNAC | 5 cut(s) | 184, 622, 671, 794, 883 |
| MalI | GATC | 3 cut(s) | 6, 405, 935 |
| MboI | GATC | 3 cut(s) | 4, 403, 933 |
| MboII | GAAGA | 2 cut(s) | 815, 932 |
| MflI | RGATCY | 1 cut(s) | 4 |
| MhlI | GDGCHC | 2 cut(s) | 616, 901 |
| MluCI | AATT | 7 cut(s) | 333, 379, 408, 483, 551, 723, 1052 |
| MlyI | GAGTC | 1 cut(s) | 475 |
| MnlI | CCTC | 5 cut(s) | 358, 556, 760, 985, 1013 |
| MroXI | GAANNNNTTC | 1 cut(s) | 707 |
| MseI | TTAA | 3 cut(s) | 51, 369, 453 |
| MslI | CAYNNNNRTG | 3 cut(s) | 629, 686, 833 |
| MspI | CCGG | 1 cut(s) | 686 |
| MspR9I | CCNGG | 2 cut(s) | 657, 1035 |
| Mva1269I | GAATGC | 1 cut(s) | 681 |
| MvaI | CCWGG | 2 cut(s) | 657, 1035 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 872 |
| NdeII | GATC | 3 cut(s) | 4, 403, 933 |
| NlaIII | CATG | 7 cut(s) | 176, 364, 634, 715, 920, 933, 1021 |
| NmuCI | GTSAC | 3 cut(s) | 622, 671, 883 |
| NspI | RCATGY | 2 cut(s) | 176, 364 |
| PaeI | GCATGC | 2 cut(s) | 176, 364 |
| PceI | AGGCCT | 1 cut(s) | 846 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 336 |
| PctI | GAATGC | 1 cut(s) | 681 |
| PdmI | GAANNNNTTC | 1 cut(s) | 707 |
| PfeI | GAWTC | 5 cut(s) | 24, 73, 327, 509, 541 |
| PleI | GAGTC | 1 cut(s) | 474 |
| PmaCI | CACGTG | 1 cut(s) | 524 |
| PmlI | CACGTG | 1 cut(s) | 524 |
| PpsI | GAGTC | 1 cut(s) | 474 |
| Ppu21I | YACGTR | 1 cut(s) | 524 |
| PsiI | TTATAA | 1 cut(s) | 98 |
| Psp6I | CCWGG | 2 cut(s) | 655, 1033 |
| PspCI | CACGTG | 1 cut(s) | 524 |
| PspGI | CCWGG | 2 cut(s) | 655, 1033 |
| PspPI | GGNCC | 1 cut(s) | 1031 |
| PsuI | RGATCY | 1 cut(s) | 4 |
| RsaI | GTAC | 3 cut(s) | 115, 474, 601 |
| RsaNI | GTAC | 3 cut(s) | 114, 473, 600 |
| RseI | CAYNNNNRTG | 3 cut(s) | 629, 686, 833 |
| SaqAI | TTAA | 3 cut(s) | 51, 369, 453 |
| Sau3AI | GATC | 3 cut(s) | 4, 403, 933 |
| Sau96I | GGNCC | 1 cut(s) | 1031 |
| SchI | GAGTC | 1 cut(s) | 475 |
| ScrFI | CCNGG | 2 cut(s) | 657, 1035 |
| SduI | GDGCHC | 2 cut(s) | 616, 901 |
| SfaNI | GCATC | 1 cut(s) | 978 |
| SfcI | CTRYAG | 2 cut(s) | 159, 639 |
| SinI | GGWCC | 1 cut(s) | 1031 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 629, 686, 833 |
| SphI | GCATGC | 2 cut(s) | 176, 364 |
| Sse9I | AATT | 7 cut(s) | 333, 379, 408, 483, 551, 723, 1052 |
| SseBI | AGGCCT | 1 cut(s) | 846 |
| SsiI | CCGC | 1 cut(s) | 519 |
| SspI | AATATT | 2 cut(s) | 926, 1041 |
| SspMI | CTAG | 3 cut(s) | 401, 470, 1069 |
| StuI | AGGCCT | 1 cut(s) | 846 |
| StyD4I | CCNGG | 2 cut(s) | 655, 1033 |
| StyI | CCWWGG | 1 cut(s) | 1061 |
| TaaI | ACNGT | 2 cut(s) | 302, 604 |
| TaiI | ACGT | 4 cut(s) | 135, 526, 596, 796 |
| TaqI | TCGA | 3 cut(s) | 139, 575, 1008 |
| TasI | AATT | 7 cut(s) | 333, 379, 408, 483, 551, 723, 1052 |
| TatI | WGTACW | 1 cut(s) | 599 |
| TfiI | GAWTC | 5 cut(s) | 24, 73, 327, 509, 541 |
| Tru1I | TTAA | 3 cut(s) | 51, 369, 453 |
| Tru9I | TTAA | 3 cut(s) | 51, 369, 453 |
| TscAI | CASTG | 2 cut(s) | 132, 975 |
| TseFI | GTSAC | 3 cut(s) | 622, 671, 883 |
| Tsp45I | GTSAC | 3 cut(s) | 622, 671, 883 |
| TspRI | CASTG | 2 cut(s) | 132, 975 |
| VpaK11BI | GGWCC | 1 cut(s) | 1031 |
| XapI | RAATTY | 3 cut(s) | 408, 483, 1052 |
| XceI | RCATGY | 2 cut(s) | 176, 364 |
| XmiI | GTMKAC | 1 cut(s) | 1022 |
| XmnI | GAANNNNTTC | 1 cut(s) | 707 |
| XspI | CTAG | 3 cut(s) | 401, 470, 1069 |