protein ubiquitination
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 247, 673 |
| AclI | AACGTT | 1 cut(s) | 643 |
| AcoI | YGGCCR | 1 cut(s) | 702 |
| AcsI | RAATTY | 1 cut(s) | 280 |
| AcuI | CTGAAG | 1 cut(s) | 709 |
| AfaI | GTAC | 1 cut(s) | 256 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 221, 504, 655 |
| AgsI | TTSAA | 3 cut(s) | 40, 413, 641 |
| AjnI | CCWGG | 1 cut(s) | 216 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 674, 706 |
| AluBI | AGCT | 3 cut(s) | 291, 419, 739 |
| AluI | AGCT | 3 cut(s) | 291, 419, 739 |
| Alw21I | GWGCWC | 1 cut(s) | 303 |
| Alw26I | GTCTC | 1 cut(s) | 16 |
| Alw44I | GTGCAC | 1 cut(s) | 299 |
| AoxI | GGCC | 4 cut(s) | 99, 479, 495, 702 |
| ApaLI | GTGCAC | 1 cut(s) | 299 |
| ApeKI | GCWGC | 4 cut(s) | 291, 294, 416, 578 |
| ApoI | RAATTY | 1 cut(s) | 280 |
| AspS9I | GGNCC | 2 cut(s) | 479, 496 |
| BaeGI | GKGCMC | 1 cut(s) | 303 |
| BalI | TGGCCA | 1 cut(s) | 704 |
| BbsI | GAAGAC | 1 cut(s) | 345 |
| Bbv12I | GWGCWC | 1 cut(s) | 303 |
| BbvI | GCAGC | 4 cut(s) | 278, 306, 428, 565 |
| BceAI | ACGGC | 1 cut(s) | 345 |
| BciT130I | CCWGG | 1 cut(s) | 218 |
| BciVI | GTATCC | 1 cut(s) | 56 |
| BcoDI | GTCTC | 1 cut(s) | 16 |
| BfmI | CTRYAG | 2 cut(s) | 292, 666 |
| BfuI | GTATCC | 1 cut(s) | 56 |
| BisI | GCNGC | 5 cut(s) | 248, 292, 295, 417, 579 |
| BlsI | GCNGC | 5 cut(s) | 249, 293, 296, 418, 580 |
| Bme1390I | CCNGG | 1 cut(s) | 218 |
| BmgT120I | GGNCC | 2 cut(s) | 479, 496 |
| BmiI | GGNNCC | 1 cut(s) | 480 |
| BmrFI | CCNGG | 1 cut(s) | 218 |
| BmsI | GCATC | 2 cut(s) | 60, 565 |
| BpiI | GAAGAC | 1 cut(s) | 345 |
| BpmI | CTGGAG | 1 cut(s) | 128 |
| Bsa29I | ATCGAT | 1 cut(s) | 120 |
| BsaJI | CCNNGG | 1 cut(s) | 216 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 221, 504, 655 |
| Bse1I | ACTGG | 1 cut(s) | 111 |
| Bse3DI | GCAATG | 3 cut(s) | 95, 136, 666 |
| BseBI | CCWGG | 1 cut(s) | 218 |
| BseCI | ATCGAT | 1 cut(s) | 120 |
| BseDI | CCNNGG | 1 cut(s) | 216 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 221, 504, 655 |
| BseMI | GCAATG | 3 cut(s) | 95, 136, 666 |
| BseMII | CTCAG | 1 cut(s) | 67 |
| BseNI | ACTGG | 1 cut(s) | 111 |
| BseSI | GKGCMC | 1 cut(s) | 303 |
| BseXI | GCAGC | 4 cut(s) | 278, 306, 428, 565 |
| BsgI | GTGCAG | 1 cut(s) | 357 |
| BshFI | GGCC | 4 cut(s) | 101, 481, 497, 704 |
| BshVI | ATCGAT | 1 cut(s) | 120 |
| BsiHKAI | GWGCWC | 1 cut(s) | 303 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 221, 504, 655 |
| BsmAI | GTCTC | 1 cut(s) | 16 |
| BsmBI | CGTCTC | 1 cut(s) | 16 |
| BsmI | GAATGC | 2 cut(s) | 428, 719 |
| BsnI | GGCC | 4 cut(s) | 101, 481, 497, 704 |
| Bsp1286I | GDGCHC | 1 cut(s) | 303 |
| Bsp143I | GATC | 3 cut(s) | 117, 192, 759 |
| BspACI | CCGC | 2 cut(s) | 247, 673 |
| BspANI | GGCC | 4 cut(s) | 101, 481, 497, 704 |
| BspCNI | CTCAG | 1 cut(s) | 66 |
| BspDI | ATCGAT | 1 cut(s) | 120 |
| BspHI | TCATGA | 1 cut(s) | 285 |
| BspLI | GGNNCC | 1 cut(s) | 480 |
| BspMAI | CTGCAG | 1 cut(s) | 296 |
| BsrDI | GCAATG | 3 cut(s) | 95, 136, 666 |
| BsrI | ACTGG | 1 cut(s) | 111 |
| BssECI | CCNNGG | 1 cut(s) | 216 |
| BssMI | GATC | 3 cut(s) | 117, 192, 759 |
| Bst2UI | CCWGG | 1 cut(s) | 218 |
| Bst4CI | ACNGT | 5 cut(s) | 83, 259, 315, 599, 713 |
| BstC8I | GCNNGC | 3 cut(s) | 274, 299, 529 |
| BstDEI | CTNAG | 1 cut(s) | 53 |
| BstKTI | GATC | 3 cut(s) | 120, 195, 762 |
| BstMAI | GTCTC | 1 cut(s) | 16 |
| BstMBI | GATC | 3 cut(s) | 117, 192, 759 |
| BstNI | CCWGG | 1 cut(s) | 218 |
| BstSCI | CCNGG | 1 cut(s) | 216 |
| BstSFI | CTRYAG | 2 cut(s) | 292, 666 |
| BstSLI | GKGCMC | 1 cut(s) | 303 |
| BstV1I | GCAGC | 4 cut(s) | 278, 306, 428, 565 |
| BstV2I | GAAGAC | 1 cut(s) | 345 |
| Bsu15I | ATCGAT | 1 cut(s) | 120 |
| BsuI | GTATCC | 1 cut(s) | 56 |
| BsuRI | GGCC | 4 cut(s) | 101, 481, 497, 704 |
| BsuTUI | ATCGAT | 1 cut(s) | 120 |
| BtsI | GCAGTG | 1 cut(s) | 369 |
| BtsIMutI | CAGTG | 3 cut(s) | 104, 369, 733 |
| Cac8I | GCNNGC | 3 cut(s) | 274, 299, 529 |
| CciI | TCATGA | 1 cut(s) | 285 |
| Cfr13I | GGNCC | 2 cut(s) | 479, 496 |
| ClaI | ATCGAT | 1 cut(s) | 120 |
| Csp6I | GTAC | 1 cut(s) | 255 |
| CviAII | CATG | 5 cut(s) | 115, 251, 286, 427, 679 |
| CviQI | GTAC | 1 cut(s) | 255 |
| DdeI | CTNAG | 1 cut(s) | 53 |
| DpnI | GATC | 3 cut(s) | 119, 194, 761 |
| DpnII | GATC | 3 cut(s) | 117, 192, 759 |
| EaeI | YGGCCR | 1 cut(s) | 702 |
| Eco32I | GATATC | 1 cut(s) | 142 |
| Eco57I | CTGAAG | 1 cut(s) | 709 |
| EcoO109I | RGGNCCY | 1 cut(s) | 479 |
| EcoRII | CCWGG | 1 cut(s) | 216 |
| EcoRV | GATATC | 1 cut(s) | 142 |
| EcoT22I | ATGCAT | 1 cut(s) | 428 |
| Esp3I | CGTCTC | 1 cut(s) | 16 |
| FaeI | CATG | 5 cut(s) | 118, 254, 289, 430, 682 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 219, 251 |
| FatI | CATG | 5 cut(s) | 114, 250, 285, 426, 678 |
| Fnu4HI | GCNGC | 5 cut(s) | 248, 292, 295, 417, 579 |
| Fsp4HI | GCNGC | 5 cut(s) | 248, 292, 295, 417, 579 |
| GluI | GCNGC | 5 cut(s) | 248, 292, 295, 417, 579 |
| GsuI | CTGGAG | 1 cut(s) | 128 |
| HaeIII | GGCC | 4 cut(s) | 101, 481, 497, 704 |
| Hin1II | CATG | 5 cut(s) | 118, 254, 289, 430, 682 |
| HinfI | GANTC | 2 cut(s) | 199, 637 |
| Hpy166II | GTNNAC | 1 cut(s) | 301 |
| Hpy188I | TCNGA | 3 cut(s) | 56, 574, 595 |
| Hpy188III | TCNNGA | 4 cut(s) | 37, 196, 286, 401 |
| Hpy8I | GTNNAC | 1 cut(s) | 301 |
| HpyAV | CCTTC | 2 cut(s) | 91, 215 |
| HpyCH4III | ACNGT | 5 cut(s) | 83, 259, 315, 599, 713 |
| HpyCH4IV | ACGT | 1 cut(s) | 643 |
| HpyCH4V | TGCA | 5 cut(s) | 294, 301, 374, 426, 719 |
| HpyF3I | CTNAG | 1 cut(s) | 53 |
| HpySE526I | ACGT | 1 cut(s) | 643 |
| Hsp92II | CATG | 5 cut(s) | 118, 254, 289, 430, 682 |
| Kzo9I | GATC | 3 cut(s) | 117, 192, 759 |
| LmnI | GCTCC | 1 cut(s) | 518 |
| LpnPI | CCDG | 7 cut(s) | 23, 92, 203, 230, 244, 391, 414 |
| Lsp1109I | GCAGC | 4 cut(s) | 278, 306, 428, 565 |
| LweI | GCATC | 2 cut(s) | 60, 565 |
| MaeII | ACGT | 1 cut(s) | 643 |
| MaeIII | GTNAC | 3 cut(s) | 365, 644, 694 |
| MalI | GATC | 3 cut(s) | 119, 194, 761 |
| MboI | GATC | 3 cut(s) | 117, 192, 759 |
| MboII | GAAGA | 5 cut(s) | 106, 194, 254, 350, 715 |
| MhlI | GDGCHC | 1 cut(s) | 303 |
| MlsI | TGGCCA | 1 cut(s) | 704 |
| MluCI | AATT | 5 cut(s) | 280, 391, 445, 742, 755 |
| MluNI | TGGCCA | 1 cut(s) | 704 |
| MmeI | TCCRAC | 1 cut(s) | 73 |
| MnlI | CCTC | 7 cut(s) | 20, 103, 469, 474, 492, 498, 554 |
| Mox20I | TGGCCA | 1 cut(s) | 704 |
| Mph1103I | ATGCAT | 1 cut(s) | 428 |
| MscI | TGGCCA | 1 cut(s) | 704 |
| MseI | TTAA | 2 cut(s) | 326, 432 |
| Msp20I | TGGCCA | 1 cut(s) | 704 |
| MspA1I | CMGCKG | 1 cut(s) | 419 |
| MspR9I | CCNGG | 1 cut(s) | 218 |
| Mva1269I | GAATGC | 2 cut(s) | 428, 719 |
| MvaI | CCWGG | 1 cut(s) | 218 |
| NdeII | GATC | 3 cut(s) | 117, 192, 759 |
| NlaIII | CATG | 5 cut(s) | 118, 254, 289, 430, 682 |
| NlaIV | GGNNCC | 1 cut(s) | 480 |
| NsiI | ATGCAT | 1 cut(s) | 428 |
| PagI | TCATGA | 1 cut(s) | 285 |
| PctI | GAATGC | 2 cut(s) | 428, 719 |
| PfeI | GAWTC | 2 cut(s) | 199, 637 |
| PflFI | GACNNNGTC | 1 cut(s) | 27 |
| PkrI | GCNGC | 5 cut(s) | 249, 293, 296, 418, 580 |
| Psp1406I | AACGTT | 1 cut(s) | 643 |
| Psp6I | CCWGG | 1 cut(s) | 216 |
| PspGI | CCWGG | 1 cut(s) | 216 |
| PspN4I | GGNNCC | 1 cut(s) | 480 |
| PspPI | GGNCC | 2 cut(s) | 479, 496 |
| PstI | CTGCAG | 1 cut(s) | 296 |
| PsyI | GACNNNGTC | 1 cut(s) | 27 |
| PvuII | CAGCTG | 1 cut(s) | 419 |
| RsaI | GTAC | 1 cut(s) | 256 |
| RsaNI | GTAC | 1 cut(s) | 255 |
| SaqAI | TTAA | 2 cut(s) | 326, 432 |
| SatI | GCNGC | 5 cut(s) | 248, 292, 295, 417, 579 |
| Sau3AI | GATC | 3 cut(s) | 117, 192, 759 |
| Sau96I | GGNCC | 2 cut(s) | 479, 496 |
| ScrFI | CCNGG | 1 cut(s) | 218 |
| SduI | GDGCHC | 1 cut(s) | 303 |
| SetI | ASST | 6 cut(s) | 31, 293, 421, 466, 646, 741 |
| SfaNI | GCATC | 2 cut(s) | 60, 565 |
| SfcI | CTRYAG | 2 cut(s) | 292, 666 |
| Sse9I | AATT | 5 cut(s) | 280, 391, 445, 742, 755 |
| SsiI | CCGC | 2 cut(s) | 247, 673 |
| StyD4I | CCNGG | 1 cut(s) | 216 |
| TaaI | ACNGT | 5 cut(s) | 83, 259, 315, 599, 713 |
| TaiI | ACGT | 1 cut(s) | 646 |
| TaqI | TCGA | 2 cut(s) | 120, 474 |
| TasI | AATT | 5 cut(s) | 280, 391, 445, 742, 755 |
| TauI | GCSGC | 1 cut(s) | 250 |
| TfiI | GAWTC | 2 cut(s) | 199, 637 |
| Tru1I | TTAA | 2 cut(s) | 326, 432 |
| Tru9I | TTAA | 2 cut(s) | 326, 432 |
| TscAI | CASTG | 3 cut(s) | 111, 376, 733 |
| TseI | GCWGC | 4 cut(s) | 291, 294, 416, 578 |
| TspDTI | ATGAA | 4 cut(s) | 17, 29, 274, 695 |
| TspGWI | ACGGA | 1 cut(s) | 350 |
| TspRI | CASTG | 3 cut(s) | 111, 376, 733 |
| Tth111I | GACNNNGTC | 1 cut(s) | 27 |
| VneI | GTGCAC | 1 cut(s) | 299 |
| XapI | RAATTY | 1 cut(s) | 280 |
| Zsp2I | ATGCAT | 1 cut(s) | 428 |