protein ubiquitination
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 471 |
| AciI | CCGC | 2 cut(s) | 447, 464 |
| AcoI | YGGCCR | 2 cut(s) | 80, 392 |
| AcyI | GRCGYC | 1 cut(s) | 339 |
| AfaI | GTAC | 3 cut(s) | 86, 119, 129 |
| AgsI | TTSAA | 2 cut(s) | 25, 161 |
| AjnI | CCWGG | 1 cut(s) | 196 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 42, 74 |
| AluBI | AGCT | 2 cut(s) | 90, 146 |
| AluI | AGCT | 2 cut(s) | 90, 146 |
| Alw26I | GTCTC | 1 cut(s) | 263 |
| AoxI | GGCC | 3 cut(s) | 80, 194, 392 |
| ApeKI | GCWGC | 2 cut(s) | 111, 420 |
| AspLEI | GCGC | 2 cut(s) | 313, 471 |
| AsuC2I | CCSGG | 1 cut(s) | 170 |
| BalI | TGGCCA | 1 cut(s) | 394 |
| BbsI | GAAGAC | 1 cut(s) | 309 |
| BbvI | GCAGC | 2 cut(s) | 123, 432 |
| BccI | CCATC | 1 cut(s) | 90 |
| BceAI | ACGGC | 2 cut(s) | 67, 95 |
| BciT130I | CCWGG | 1 cut(s) | 198 |
| BciVI | GTATCC | 1 cut(s) | 454 |
| BcnI | CCSGG | 1 cut(s) | 170 |
| BcoDI | GTCTC | 1 cut(s) | 263 |
| BfaI | CTAG | 2 cut(s) | 147, 461 |
| BfoI | RGCGCY | 1 cut(s) | 314 |
| BfuI | GTATCC | 1 cut(s) | 454 |
| BisI | GCNGC | 2 cut(s) | 112, 421 |
| BlsI | GCNGC | 2 cut(s) | 113, 422 |
| Bme1390I | CCNGG | 2 cut(s) | 170, 198 |
| BmrFI | CCNGG | 2 cut(s) | 170, 198 |
| BpiI | GAAGAC | 1 cut(s) | 309 |
| BpuMI | CCSGG | 1 cut(s) | 170 |
| BsaHI | GRCGYC | 1 cut(s) | 339 |
| BsaJI | CCNNGG | 3 cut(s) | 153, 385, 395 |
| Bse1I | ACTGG | 1 cut(s) | 212 |
| BseBI | CCWGG | 1 cut(s) | 198 |
| BseDI | CCNNGG | 3 cut(s) | 153, 385, 395 |
| BseNI | ACTGG | 1 cut(s) | 212 |
| BseX3I | CGGCCG | 1 cut(s) | 80 |
| BseXI | GCAGC | 2 cut(s) | 123, 432 |
| Bsh1236I | CGCG | 1 cut(s) | 471 |
| Bsh1285I | CGRYCG | 1 cut(s) | 83 |
| BshFI | GGCC | 3 cut(s) | 82, 196, 394 |
| BsiEI | CGRYCG | 1 cut(s) | 83 |
| BsiSI | CCGG | 1 cut(s) | 169 |
| BslFI | GGGAC | 1 cut(s) | 326 |
| BsmAI | GTCTC | 1 cut(s) | 263 |
| BsmFI | GGGAC | 1 cut(s) | 326 |
| BsnI | GGCC | 3 cut(s) | 82, 196, 394 |
| Bsp1407I | TGTACA | 2 cut(s) | 117, 127 |
| Bsp143I | GATC | 1 cut(s) | 183 |
| Bsp19I | CCATGG | 2 cut(s) | 153, 395 |
| BspACI | CCGC | 2 cut(s) | 447, 464 |
| BspANI | GGCC | 3 cut(s) | 82, 196, 394 |
| BspFNI | CGCG | 1 cut(s) | 471 |
| BsrGI | TGTACA | 2 cut(s) | 117, 127 |
| BsrI | ACTGG | 1 cut(s) | 212 |
| BssECI | CCNNGG | 3 cut(s) | 153, 385, 395 |
| BssMI | GATC | 1 cut(s) | 183 |
| BssNI | GRCGYC | 1 cut(s) | 339 |
| BssT1I | CCWWGG | 3 cut(s) | 153, 385, 395 |
| Bst2UI | CCWGG | 1 cut(s) | 198 |
| BstACI | GRCGYC | 1 cut(s) | 339 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 426 |
| BstAUI | TGTACA | 2 cut(s) | 117, 127 |
| BstDSI | CCRYGG | 2 cut(s) | 153, 395 |
| BstFNI | CGCG | 1 cut(s) | 471 |
| BstH2I | RGCGCY | 1 cut(s) | 314 |
| BstHHI | GCGC | 2 cut(s) | 313, 471 |
| BstKTI | GATC | 1 cut(s) | 186 |
| BstMAI | GTCTC | 1 cut(s) | 263 |
| BstMBI | GATC | 1 cut(s) | 183 |
| BstMCI | CGRYCG | 1 cut(s) | 83 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 426 |
| BstNI | CCWGG | 1 cut(s) | 198 |
| BstSCI | CCNGG | 2 cut(s) | 168, 196 |
| BstUI | CGCG | 1 cut(s) | 471 |
| BstV1I | GCAGC | 2 cut(s) | 123, 432 |
| BstV2I | GAAGAC | 1 cut(s) | 309 |
| BstZI | CGGCCG | 1 cut(s) | 80 |
| BsuI | GTATCC | 1 cut(s) | 454 |
| BsuRI | GGCC | 3 cut(s) | 82, 196, 394 |
| BtgI | CCRYGG | 2 cut(s) | 153, 395 |
| BtsI | GCAGTG | 1 cut(s) | 456 |
| BtsIMutI | CAGTG | 2 cut(s) | 297, 456 |
| CfoI | GCGC | 2 cut(s) | 313, 471 |
| CseI | GACGC | 1 cut(s) | 328 |
| Csp6I | GTAC | 3 cut(s) | 85, 118, 128 |
| CviAII | CATG | 3 cut(s) | 154, 362, 396 |
| CviQI | GTAC | 3 cut(s) | 85, 118, 128 |
| DpnI | GATC | 1 cut(s) | 185 |
| DpnII | GATC | 1 cut(s) | 183 |
| EaeI | YGGCCR | 2 cut(s) | 80, 392 |
| EagI | CGGCCG | 1 cut(s) | 80 |
| EclXI | CGGCCG | 1 cut(s) | 80 |
| Eco130I | CCWWGG | 3 cut(s) | 153, 385, 395 |
| Eco52I | CGGCCG | 1 cut(s) | 80 |
| EcoRII | CCWGG | 1 cut(s) | 196 |
| EcoT14I | CCWWGG | 3 cut(s) | 153, 385, 395 |
| ErhI | CCWWGG | 3 cut(s) | 153, 385, 395 |
| FaeI | CATG | 3 cut(s) | 157, 365, 399 |
| FaiI | YATR | 9 cut(s) | 18, 105, 155, 207, 328, 363, 397, 427, 456 |
| FaqI | GGGAC | 1 cut(s) | 326 |
| FatI | CATG | 3 cut(s) | 153, 361, 395 |
| Fnu4HI | GCNGC | 2 cut(s) | 112, 421 |
| Fsp4HI | GCNGC | 2 cut(s) | 112, 421 |
| FspBI | CTAG | 2 cut(s) | 147, 461 |
| GlaI | GCGC | 2 cut(s) | 312, 470 |
| GluI | GCNGC | 2 cut(s) | 112, 421 |
| HaeII | RGCGCY | 1 cut(s) | 314 |
| HaeIII | GGCC | 3 cut(s) | 82, 196, 394 |
| HapII | CCGG | 1 cut(s) | 169 |
| HgaI | GACGC | 1 cut(s) | 328 |
| HhaI | GCGC | 2 cut(s) | 313, 471 |
| Hin1I | GRCGYC | 1 cut(s) | 339 |
| Hin1II | CATG | 3 cut(s) | 157, 365, 399 |
| Hin6I | GCGC | 2 cut(s) | 311, 469 |
| HinP1I | GCGC | 2 cut(s) | 311, 469 |
| HinfI | GANTC | 2 cut(s) | 136, 350 |
| HpaII | CCGG | 1 cut(s) | 169 |
| Hpy166II | GTNNAC | 3 cut(s) | 118, 128, 130 |
| Hpy188I | TCNGA | 1 cut(s) | 141 |
| Hpy188III | TCNNGA | 1 cut(s) | 275 |
| Hpy8I | GTNNAC | 3 cut(s) | 118, 128, 130 |
| Hpy99I | CGWCG | 1 cut(s) | 43 |
| HpyCH4V | TGCA | 3 cut(s) | 111, 361, 454 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 426 |
| Hsp92I | GRCGYC | 1 cut(s) | 339 |
| Hsp92II | CATG | 3 cut(s) | 157, 365, 399 |
| HspAI | GCGC | 2 cut(s) | 311, 469 |
| Kzo9I | GATC | 1 cut(s) | 183 |
| LpnPI | CCDG | 8 cut(s) | 118, 182, 183, 210, 225, 292, 321, 425 |
| Lsp1109I | GCAGC | 2 cut(s) | 123, 432 |
| MaeI | CTAG | 2 cut(s) | 147, 461 |
| MaeIII | GTNAC | 1 cut(s) | 292 |
| MalI | GATC | 1 cut(s) | 185 |
| MboI | GATC | 1 cut(s) | 183 |
| MboII | GAAGA | 3 cut(s) | 62, 65, 314 |
| MlsI | TGGCCA | 1 cut(s) | 394 |
| MluNI | TGGCCA | 1 cut(s) | 394 |
| MlyI | GAGTC | 1 cut(s) | 344 |
| MnlI | CCTC | 2 cut(s) | 213, 274 |
| Mox20I | TGGCCA | 1 cut(s) | 394 |
| MscI | TGGCCA | 1 cut(s) | 394 |
| MseI | TTAA | 1 cut(s) | 180 |
| Msp20I | TGGCCA | 1 cut(s) | 394 |
| MspI | CCGG | 1 cut(s) | 169 |
| MspR9I | CCNGG | 2 cut(s) | 170, 198 |
| MvaI | CCWGG | 1 cut(s) | 198 |
| MvnI | CGCG | 1 cut(s) | 471 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 426 |
| NciI | CCSGG | 1 cut(s) | 170 |
| NcoI | CCATGG | 2 cut(s) | 153, 395 |
| NdeII | GATC | 1 cut(s) | 183 |
| NlaIII | CATG | 3 cut(s) | 157, 365, 399 |
| NmuCI | GTSAC | 1 cut(s) | 292 |
| PfeI | GAWTC | 1 cut(s) | 136 |
| PkrI | GCNGC | 2 cut(s) | 113, 422 |
| PleI | GAGTC | 1 cut(s) | 344 |
| PpsI | GAGTC | 1 cut(s) | 344 |
| Psp6I | CCWGG | 1 cut(s) | 196 |
| PspGI | CCWGG | 1 cut(s) | 196 |
| RsaI | GTAC | 3 cut(s) | 86, 119, 129 |
| RsaNI | GTAC | 3 cut(s) | 85, 118, 128 |
| SaqAI | TTAA | 1 cut(s) | 180 |
| SatI | GCNGC | 2 cut(s) | 112, 421 |
| Sau3AI | GATC | 1 cut(s) | 183 |
| SchI | GAGTC | 1 cut(s) | 344 |
| ScrFI | CCNGG | 2 cut(s) | 170, 198 |
| SetI | ASST | 4 cut(s) | 23, 92, 148, 391 |
| SsiI | CCGC | 2 cut(s) | 447, 464 |
| SspMI | CTAG | 2 cut(s) | 147, 461 |
| StyD4I | CCNGG | 2 cut(s) | 168, 196 |
| StyI | CCWWGG | 3 cut(s) | 153, 385, 395 |
| TaqI | TCGA | 3 cut(s) | 41, 232, 353 |
| TatI | WGTACW | 2 cut(s) | 117, 127 |
| TfiI | GAWTC | 1 cut(s) | 136 |
| Tru1I | TTAA | 1 cut(s) | 180 |
| Tru9I | TTAA | 1 cut(s) | 180 |
| TscAI | CASTG | 2 cut(s) | 297, 456 |
| TseFI | GTSAC | 1 cut(s) | 292 |
| TseI | GCWGC | 2 cut(s) | 111, 420 |
| Tsp45I | GTSAC | 1 cut(s) | 292 |
| TspDTI | ATGAA | 3 cut(s) | 17, 81, 276 |
| TspGWI | ACGGA | 2 cut(s) | 21, 422 |
| TspRI | CASTG | 2 cut(s) | 297, 456 |
| XspI | CTAG | 2 cut(s) | 147, 461 |