RLG00000008871

ankyrin repeats

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
Physical Location & Seq
Forward (+)
41543503 .. 41548598
5096 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000008871

Sequence Viewer

Length: 813 bp
ATGATACTCCTAGCAGCAGTAAGAATGGCGACCCCCAATCTTCAGGGGGTTCAACCAGATTTGGCTAGAAGAATGGCCAGGCAAAAGGGAACTGGTATGGGGTTCTCTACAAATTCTGGACATAATCAAAATAAACTCCTAGTGTTACGAAGGTTCAATGACAATGAGGATCAGATTATCTATGAGAAAAAGTATGTAGGGAATGAGAGCCTTGAGAAAACGTTGACCAATAAGGTGGTCAATGAAGAATCTCACCCTTTCACCGATCAAAATCACCAGGAGCCTAGGCTAACTGATCCACAATGGAGGCAGCAGATTATTGACATGATCAAGATCTATACGGAGAAGCCTGAGAGTGAGAACAATGCCAACGACTTCAAACGCTATGAACCTTTCTTCAATTATGTTGTCGGTGGAAATTGGCAAAAGGCAAAGGAGTGTCTTGAAGAAGAAGAACTAGATATCAACGAAGCAGTGAGAGCAAGAGATCCAAAAGACCAAAACACAGCTCTTAACCTAGCAGCCAAGGAAGGGCATGCAAATATTGTTAAAGAGTTACTGTCGTTTATGAGAGAAGAAGATCTGGTAGTGAAAAACAGTCGTGGTTACACACCTTTAGGCATTTGTGCCAGAAAAGGCTATGGCGGAGCAGCAAACGCTGAAGAAGTGGCTAGATGCATAGTTGAAAAGAACAAGAATGTACTCACCGTTGGCATCAATCCTCCTCACAATTGGCTTCCAGTTGTCGAGGCTTGTTCTTGGAACAGATGGGAACTGGCTCGCTATCTCTCAGGGCCGGTCCTGAGATTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

271

Amino Acids

30.9

Weight (kDa)

6.56

Isoelectric Point (pI)

43.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 162 - 228 1.2e-07 Ankyrin repeats (3 copies)
Ank_5 PF13857 166 - 206 9.1e-07 Ankyrin repeats (many copies)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000027)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G18670 AT3G18670 AT3G54065
fragaria_vesca FvH4_1g26570 FvH4_1g26570 FvH4_5g19270 FvH4_5g19273 FvH4_5g35840 FvH4_5g36340 FvH4_5g36630 FvH4_5g37181 FvH4_5g37182 FvH4_5g37185 FvH4_5g37240 FvH4_5g37260 FvH4_6g21440 FvH4_6g44571 FvH4_6g44572 FvH4_6g44610 FvH4_6g44620 FvH4_6g44650 FvH4_6g44660 FvH4_6g45151 FvH4_6g45152 FvH4_6g45152 FvH4_6g45153 FvH4_6g45153 FvH4_6g45153 FvH4_6g45153 FvH4_6g45153 FvH4_6g45154 FvH4_6g51440 FvH4_7g08090 FvH4_7g08090 FvH4_7g08090 FvH4_7g08090 FvH4_7g08090 FvH4_7g08090
malus_domestica MD00G1010300.v1.1 MD00G1010400.v1.1 MD00G1010500.v1.1 MD00G1011000.v1.1 MD00G1011200.v1.1 MD00G1011500.v1.1 MD00G1011900.v1.1 MD03G1133900.v1.1 MD03G1134100.v1.1 MD09G1086300.v1.1 MD09G1086500.v1.1 MD09G1086900.v1.1 MD09G1087000.v1.1 MD09G1088000.v1.1 MD09G1088100.v1.1 MD09G1088200.v1.1 MD09G1088300.v1.1 MD09G1089000.v1.1 MD09G1089300.v1.1 MD09G1133800.v1.1 MD16G1219400.v1.1 MD17G1027900.v1.1 MD17G1028400.v1.1 MD17G1028600.v1.1 MD17G1028700.v1.1 MD17G1028900.v1.1 MD17G1029000.v1.1 MD17G1029100.v1.1 MD17G1029200.v1.1 MD17G1075400.v1.1 MD17G1076000.v1.1 MD17G1077000.v1.1 MD17G1077100.v1.1 MD17G1077800.v1.1 MD17G1078000.v1.1 MD17G1078100.v1.1 MD17G1078300.v1.1 MD17G1100900.v1.1 MD17G1101100.v1.1 MD17G1101400.v1.1 MD17G1104200.v1.1 MD17G1104500.v1.1 MD17G1121300.v1.1 MD17G1121600.v1.1 MD17G1121900.v1.1 MD17G1122700.v1.1 MD17G1218800.v1.1
prunus_persica Prupe.2G033800_v2.0.a1 Prupe.2G033900_v2.0.a1 Prupe.2G080300_v2.0.a1 Prupe.2G080700_v2.0.a1 Prupe.2G080900_v2.0.a1 Prupe.2G081100_v2.0.a1 Prupe.2G081100_v2.0.a1 Prupe.2G081200_v2.0.a1 Prupe.2G081200_v2.0.a1 Prupe.2G081200_v2.0.a1 Prupe.2G081200_v2.0.a1 Prupe.2G081700_v2.0.a1 Prupe.2G081700_v2.0.a1 Prupe.2G082000_v2.0.a1 Prupe.2G082100_v2.0.a1 Prupe.2G082100_v2.0.a1 Prupe.2G082200_v2.0.a1 Prupe.2G082300_v2.0.a1 Prupe.2G082700_v2.0.a1 Prupe.2G082800_v2.0.a1 Prupe.2G082900_v2.0.a1 Prupe.3G235600_v2.0.a1 Prupe.3G236300_v2.0.a1 Prupe.3G236300_v2.0.a1 Prupe.3G236600_v2.0.a1 Prupe.3G236600_v2.0.a1 Prupe.3G236800_v2.0.a1 Prupe.3G237000_v2.0.a1 Prupe.3G237100_v2.0.a1 Prupe.3G237300_v2.0.a1 Prupe.3G237400_v2.0.a1 Prupe.3G237500_v2.0.a1 Prupe.3G237500_v2.0.a1 Prupe.3G237500_v2.0.a1 Prupe.4G282500_v2.0.a1 Prupe.4G282500_v2.0.a1
pyrus_communis pycom03g08990 pycom03g09000 pycom09g01180 pycom09g01190 pycom09g01220 pycom09g01230 pycom09g01360 pycom09g01370 pycom09g01380 pycom09g01410 pycom09g05500 pycom11g10280 pycom11g10290 pycom11g10310 pycom16g18270 pycom16g18280 pycom17g02280 pycom17g02290 pycom17g02300 pycom17g02360 pycom17g02390 pycom17g02410 pycom17g02440 pycom17g02460 pycom17g02470 pycom17g02480 pycom17g02510 pycom17g02530 pycom17g02540 pycom17g02550 pycom17g02560 pycom17g02570 pycom17g02580 pycom17g02630 pycom17g02640 pycom17g04970 pycom17g04980 pycom17g05010 pycom17g07090 pycom17g07620 pycom17g07630 pycom17g07640 pycom17g07650 pycom17g07660 pycom17g07740 pycom17g07760 pycom17g07770 pycom17g09580 pycom17g11170 pycom17g11200 pycom17g11220 pycom17g11240 pycom17g11250 pycom17g11300 pycom17g11340 pycom17g11380 pycom17g11440
rosa_chinensis RchiOBHm_Chr1g0332901 RchiOBHm_Chr1g0338981 RchiOBHm_Chr1g0338991 RchiOBHm_Chr1g0341201 RchiOBHm_Chr1g0341211 RchiOBHm_Chr1g0342721 RchiOBHm_Chr1g0343191 RchiOBHm_Chr2g0146761 RchiOBHm_Chr2g0161791 RchiOBHm_Chr2g0161801 RchiOBHm_Chr2g0161841 RchiOBHm_Chr2g0162041 RchiOBHm_Chr2g0162651 RchiOBHm_Chr2g0162691 RchiOBHm_Chr2g0162701 RchiOBHm_Chr2g0162711 RchiOBHm_Chr2g0162721 RchiOBHm_Chr2g0162811 RchiOBHm_Chr2g0162831 RchiOBHm_Chr2g0162841 RchiOBHm_Chr4g0416381 RchiOBHm_Chr4g0416391 RchiOBHm_Chr5g0075981 RchiOBHm_Chr6g0276101 RchiOBHm_Chr7g0214581 RchiOBHm_Chr7g0214631 RchiOBHm_Chr7g0214651 RchiOBHm_Chr7g0214721 RchiOBHm_Chr7g0223161 RchiOBHm_Chr7g0230661 RchiOBHm_Chr7g0230751 RchiOBHm_Chr7g0230781 RchiOBHm_Chr7g0234581 RchiOBHm_Chr7g0234601 RchiOBHm_Chr7g0237561 RchiOBHm_Chr7g0237571 RchiOBHm_Chr7g0238781 RchiOBHm_Chr7g0238811 RchiOBHm_Chr7g0242161 RchiOBHm_Chr7g0242401 RchiOBHm_Chr7g0242451 RchiOBHm_Chr7g0242921 RchiOBHm_Chr7g0242981 RchiOBHm_Chr7g0243111 RchiOBHm_Chr7g0243251 RchiOBHm_Chr7g0243331
rosa_laevigata RLG00000000803 RLG00000000807 RLG00000000809 RLG00000000811 RLG00000000814 RLG00000000854 RLG00000000859 RLG00000000864 RLG00000000994 RLG00000000995 RLG00000001458 RLG00000001461 RLG00000001474 RLG00000001476 RLG00000002729 RLG00000002730 RLG00000003505 RLG00000008871 RLG00000008873 RLG00000018513 RLG00000021300 RLG00000021303 RLG00000021318 RLG00000021356 RLG00000021357 RLG00000029070 RLG00000029071 RLG00000029171 RLG00000029189 RLG00000029190 RLG00000029640 RLG00000034635
rosa_multiflora Rmu_co8149086.1_g000001 Rmu_co8460577.1_g000001 Rmu_sc0000429.1_g000062 Rmu_sc0000429.1_g000071 Rmu_sc0000429.1_g000081 Rmu_sc0000863.1_g000020 Rmu_sc0001488.1_g000011 Rmu_sc0001545.1_g000007 Rmu_sc0001849.1_g000068 Rmu_sc0001993.1_g000003 Rmu_sc0002222.1_g000002 Rmu_sc0002308.1_g000053 Rmu_sc0002308.1_g000069 Rmu_sc0002480.1_g000007 Rmu_sc0003179.1_g000041 Rmu_sc0004213.1_g000011 Rmu_sc0007101.1_g000012 Rmu_sc0008565.1_g000011 Rmu_sc0009298.1_g000003 Rmu_sc0010407.1_g000009 Rmu_sc0010407.1_g000013 Rmu_sc0026966.1_g000004 Rmu_ssc0000152.1_g000012 Rmu_ssc0000152.1_g000014 Rmu_ssc0000295.1_g000021 Rmu_ssc0000295.1_g000026
rosa_roxburghii Rroxscaffold_1G00029600 Rroxscaffold_2G00087790 Rroxscaffold_2G00087800 Rroxscaffold_2G00088360 Rroxscaffold_2G00088500 Rroxscaffold_2G00088530 Rroxscaffold_2G00088590 Rroxscaffold_3G00221570 Rroxscaffold_3G00222190 Rroxscaffold_3G00222240 Rroxscaffold_3G00222880 Rroxscaffold_3G00222900 Rroxscaffold_3G00223990 Rroxscaffold_3G00229750 Rroxscaffold_3G00229760 Rroxscaffold_3G00245140 Rroxscaffold_3G00245150 Rroxscaffold_3G00245200 Rroxscaffold_3G00253520 Rroxscaffold_3G00253530 Rroxscaffold_4G00294500 Rroxscaffold_4G00311800 Rroxscaffold_4G00311830 Rroxscaffold_4G00311850 Rroxscaffold_4G00313180 Rroxscaffold_4G00313210 Rroxscaffold_4G00316270 Rroxscaffold_4G00317910 Rroxscaffold_4G00317920 Rroxscaffold_5G00349290 Rroxscaffold_5G00349300 Rroxscaffold_5G00349310 Rroxscaffold_5G00351950 Rroxscaffold_5G00351960 Rroxscaffold_5G00353390 Rroxscaffold_7G00192540
rosa_rugosa Rorug01G0102500 Rorug01G0102600 Rorug01G0146400.1 Rorug01G0146500.1 Rorug01G0159400.1 Rorug01G0159500.1 Rorug02G0491900 Rorug02G0492000 Rorug02G0492100 Rorug02G0492200 Rorug02G0492300 Rorug02G0492400 Rorug02G0492500 Rorug02G0492700 Rorug02G0498500 Rorug02G0498600 Rorug02G0498800 Rorug04G0006900 Rorug04G0053700 Rorug06G0002000 Rorug06G0002100 Rorug07G0304700 Rorug07G0304800 Rorug07G0304800 Rorug07G0304800 Rorug07G0305300 Rorug07G0305400 Rorug07G0305500 Rorug07G0305500 Rorug07G0318300 Rorug07G0318600 Rorug07G0323600
rosa_samantha Rh1AG128900 Rh1AG162500 Rh1AG163000 Rh1AG164000 Rh1AG164700 Rh1AG173200 Rh1AG173300 Rh1AG173800 Rh1BG098100 Rh1BG129800 Rh1BG130600 Rh1BG141300 Rh1BG141500 Rh1BG141600 Rh1CG122700 Rh1CG151900 Rh1CG152400 Rh1CG153100 Rh1CG153500 Rh1CG161400 Rh1CG161600 Rh1DG134200 Rh1DG173500 Rh1DG173700 Rh2AG558100 Rh2AG558500 Rh2AG560200 Rh2AG564700 Rh2AG564800 Rh2BG465600 Rh2BG571700 Rh2BG572000 Rh2BG573500 Rh2CG439800 Rh2CG541800 Rh2CG542100 Rh2CG542200 Rh2CG543800 Rh2CG547300 Rh2DG474700 Rh2DG580600 Rh2DG580900 Rh2DG581200 Rh2DG581700 Rh2DG581800 Rh2DG583500 Rh2DG587200 Rh2DG587300 Rh2DG587400 Rh4AG128900 Rh4AG203800 Rh4AG319900 Rh4AG320000 Rh4BG122200 Rh4BG201100 Rh4CG136000 Rh4DG122400 Rh4DG201100 Rh4DG323600 Rh6BG077000 Rh6DG206200 Rh7AG282300 Rh7AG282500 Rh7AG283400 Rh7AG358600 Rh7AG414500 Rh7AG415200 Rh7AG415500 Rh7AG461700 Rh7AG469300 Rh7AG477800 Rh7BG273900 Rh7BG274000 Rh7BG390400 Rh7BG390500 Rh7BG391500 Rh7BG391800 Rh7BG408300 Rh7BG432000 Rh7BG439200 Rh7BG449200 Rh7BG449900 Rh7BG450400 Rh7BG450500 Rh7CG220900 Rh7CG301600 Rh7CG302700 Rh7CG377000 Rh7CG433900 Rh7CG434200 Rh7CG478800 Rh7DG286200 Rh7DG354000 Rh7DG424600 Rh7DG448000 Rh7DG462800 Rh7DG462900
rosa_wichuraiana Rw0G003440 Rw0G011970 Rw0G017120 Rw0G017130 Rw0G017140 Rw0G018470 Rw0G018480 Rw0G020440 Rw1G010470 Rw2G046180 Rw2G046210 Rw2G046230 Rw2G046390 Rw2G046400 Rw2G046710 Rw2G046720 Rw2G046730 Rw3G025310 Rw4G010410 Rw4G017250 Rw6G018270 Rw7G018180 Rw7G024130 Rw7G024160 Rw7G024170 Rw7G034060 Rw7G034250 Rw7G034260 Rw7G034400 Rw7G034410 Rw7G038210 Rw7G039020 Rw7G039060 Rw7G039280 Rw7G039400 Rw7G039470 Rw7G039880 Rw7G039890

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 645
AclI AACGTT 1 cut(s) 221
AclWI GGATC 3 cut(s) 177, 290, 482
AcoI YGGCCR 1 cut(s) 75
AcsI RAATTY 1 cut(s) 112
AcuI CTGAAG 2 cut(s) 26, 681
AfaI GTAC 1 cut(s) 702
AfiI CCNNNNNNNGG 1 cut(s) 531
AgsI TTSAA 6 cut(s) 53, 157, 379, 400, 446, 686
AjnI CCWGG 2 cut(s) 77, 276
AluBI AGCT 1 cut(s) 509
AluI AGCT 1 cut(s) 509
AlwI GGATC 3 cut(s) 177, 290, 482
AoxI GGCC 2 cut(s) 75, 794
ApeKI GCWGC 4 cut(s) 14, 310, 521, 650
ApoI RAATTY 1 cut(s) 112
AspA2I CCTAGG 1 cut(s) 284
AspS9I GGNCC 2 cut(s) 794, 799
AsuHPI GGTGA 4 cut(s) 245, 253, 266, 697
AvaII GGWCC 1 cut(s) 799
AvrII CCTAGG 1 cut(s) 284
BalI TGGCCA 1 cut(s) 77
BbvI GCAGC 4 cut(s) 26, 322, 533, 662
BccI CCATC 1 cut(s) 762
BciT130I CCWGG 2 cut(s) 79, 278
BclI TGATCA 1 cut(s) 327
BfaI CTAG 7 cut(s) 11, 66, 140, 285, 458, 518, 672
BglII AGATCT 2 cut(s) 333, 580
BisI GCNGC 4 cut(s) 15, 311, 522, 651
BlnI CCTAGG 1 cut(s) 284
BlsI GCNGC 4 cut(s) 16, 312, 523, 652
Bme1390I CCNGG 2 cut(s) 79, 278
Bme18I GGWCC 1 cut(s) 799
BmgT120I GGNCC 2 cut(s) 794, 799
BmiI GGNNCC 1 cut(s) 282
BmrFI CCNGG 2 cut(s) 79, 278
BmsI GCATC 2 cut(s) 665, 723
BpuEI CTTGAG 1 cut(s) 233
BsaBI GATNNNNATC 2 cut(s) 270, 332
BsaJI CCNNGG 2 cut(s) 284, 525
Bsc4I CCNNNNNNNGG 1 cut(s) 531
Bse118I RCCGGY 1 cut(s) 796
Bse1I ACTGG 3 cut(s) 97, 740, 780
Bse8I GATNNNNATC 2 cut(s) 270, 332
BseBI CCWGG 2 cut(s) 79, 278
BseDI CCNNGG 2 cut(s) 284, 525
BseJI GATNNNNATC 2 cut(s) 270, 332
BseLI CCNNNNNNNGG 1 cut(s) 531
BseMII CTCAG 3 cut(s) 342, 794, 804
BseNI ACTGG 3 cut(s) 97, 740, 780
BseRI GAGGAG 1 cut(s) 714
BseXI GCAGC 4 cut(s) 26, 322, 533, 662
BshFI GGCC 2 cut(s) 77, 796
BsiSI CCGG 1 cut(s) 797
BslI CCNNNNNNNGG 1 cut(s) 531
BsnI GGCC 2 cut(s) 77, 796
Bsp143I GATC 7 cut(s) 169, 265, 295, 327, 333, 487, 580
BspACI CCGC 1 cut(s) 645
BspANI GGCC 2 cut(s) 77, 796
BspCNI CTCAG 3 cut(s) 343, 795, 803
BspLI GGNNCC 1 cut(s) 282
BspPI GGATC 3 cut(s) 177, 290, 482
BsrFI RCCGGY 1 cut(s) 796
BsrI ACTGG 3 cut(s) 97, 740, 780
BssAI RCCGGY 1 cut(s) 796
BssECI CCNNGG 2 cut(s) 284, 525
BssMI GATC 7 cut(s) 169, 265, 295, 327, 333, 487, 580
BssT1I CCWWGG 2 cut(s) 284, 525
Bst2UI CCWGG 2 cut(s) 79, 278
Bst4CI ACNGT 3 cut(s) 561, 599, 709
BstC8I GCNNGC 2 cut(s) 537, 781
BstDEI CTNAG 3 cut(s) 351, 790, 803
BstKTI GATC 7 cut(s) 172, 268, 298, 330, 336, 490, 583
BstMBI GATC 7 cut(s) 169, 265, 295, 327, 333, 487, 580
BstMWI GCNNNNNNNGC 2 cut(s) 479, 656
BstNI CCWGG 2 cut(s) 79, 278
BstNSI RCATGY 1 cut(s) 539
BstSCI CCNGG 2 cut(s) 77, 276
BstV1I GCAGC 4 cut(s) 26, 322, 533, 662
BstX2I RGATCY 3 cut(s) 333, 487, 580
BstXI CCANNNNNNTGG 1 cut(s) 235
BstYI RGATCY 3 cut(s) 333, 487, 580
BsuRI GGCC 2 cut(s) 77, 796
BtsI GCAGTG 1 cut(s) 480
BtsIMutI CAGTG 1 cut(s) 480
Cac8I GCNNGC 2 cut(s) 537, 781
Cfr10I RCCGGY 1 cut(s) 796
Cfr13I GGNCC 2 cut(s) 794, 799
Csp6I GTAC 1 cut(s) 701
CviAII CATG 2 cut(s) 325, 536
CviQI GTAC 1 cut(s) 701
DdeI CTNAG 3 cut(s) 351, 790, 803
DpnI GATC 7 cut(s) 171, 267, 297, 329, 335, 489, 582
DpnII GATC 7 cut(s) 169, 265, 295, 327, 333, 487, 580
EaeI YGGCCR 1 cut(s) 75
EciI GGCGGA 1 cut(s) 660
Eco130I CCWWGG 2 cut(s) 284, 525
Eco32I GATATC 1 cut(s) 463
Eco47I GGWCC 1 cut(s) 799
Eco57I CTGAAG 2 cut(s) 26, 681
EcoRII CCWGG 2 cut(s) 77, 276
EcoRV GATATC 1 cut(s) 463
EcoT14I CCWWGG 2 cut(s) 284, 525
EcoT22I ATGCAT 1 cut(s) 680
ErhI CCWWGG 2 cut(s) 284, 525
FaeI CATG 2 cut(s) 328, 539
FatI CATG 2 cut(s) 324, 535
FbaI TGATCA 1 cut(s) 327
Fnu4HI GCNGC 4 cut(s) 15, 311, 522, 651
Fsp4HI GCNGC 4 cut(s) 15, 311, 522, 651
FspBI CTAG 7 cut(s) 11, 66, 140, 285, 458, 518, 672
GluI GCNGC 4 cut(s) 15, 311, 522, 651
HaeIII GGCC 2 cut(s) 77, 796
HapII CCGG 1 cut(s) 797
Hin1II CATG 2 cut(s) 328, 539
HincII GTYRAC 1 cut(s) 225
HindII GTYRAC 1 cut(s) 225
HinfI GANTC 2 cut(s) 248, 807
HpaII CCGG 1 cut(s) 797
HphI GGTGA 4 cut(s) 245, 253, 266, 697
Hpy166II GTNNAC 1 cut(s) 225
Hpy188I TCNGA 1 cut(s) 174
Hpy188III TCNNGA 4 cut(s) 117, 331, 443, 802
Hpy8I GTNNAC 1 cut(s) 225
HpyAV CCTTC 2 cut(s) 144, 524
HpyCH4III ACNGT 3 cut(s) 561, 599, 709
HpyCH4IV ACGT 1 cut(s) 221
HpyCH4V TGCA 2 cut(s) 539, 678
HpyF10VI GCNNNNNNNGC 2 cut(s) 479, 656
HpyF3I CTNAG 3 cut(s) 351, 790, 803
HpySE526I ACGT 1 cut(s) 221
Hsp92II CATG 2 cut(s) 328, 539
Ksp22I TGATCA 1 cut(s) 327
Kzo9I GATC 7 cut(s) 169, 265, 295, 327, 333, 487, 580
LmnI GCTCC 2 cut(s) 280, 647
Lsp1109I GCAGC 4 cut(s) 26, 322, 533, 662
LweI GCATC 2 cut(s) 665, 723
MaeI CTAG 7 cut(s) 11, 66, 140, 285, 458, 518, 672
MaeII ACGT 1 cut(s) 221
MaeIII GTNAC 3 cut(s) 144, 555, 605
MalI GATC 7 cut(s) 171, 267, 297, 329, 335, 489, 582
MboI GATC 7 cut(s) 169, 265, 295, 327, 333, 487, 580
MfeI CAATTG 1 cut(s) 730
MflI RGATCY 3 cut(s) 333, 487, 580
MlsI TGGCCA 1 cut(s) 77
MluCI AATT 4 cut(s) 112, 400, 418, 730
MluNI TGGCCA 1 cut(s) 77
MnlI CCTC 5 cut(s) 160, 300, 732, 735, 742
Mox20I TGGCCA 1 cut(s) 77
Mph1103I ATGCAT 1 cut(s) 680
MscI TGGCCA 1 cut(s) 77
MseI TTAA 2 cut(s) 513, 549
Msp20I TGGCCA 1 cut(s) 77
MspI CCGG 1 cut(s) 797
MspR9I CCNGG 2 cut(s) 79, 278
MunI CAATTG 1 cut(s) 730
MvaI CCWGG 2 cut(s) 79, 278
MwoI GCNNNNNNNGC 2 cut(s) 479, 656
NdeII GATC 7 cut(s) 169, 265, 295, 327, 333, 487, 580
NlaIII CATG 2 cut(s) 328, 539
NlaIV GGNNCC 1 cut(s) 282
NsiI ATGCAT 1 cut(s) 680
NspI RCATGY 1 cut(s) 539
PaeI GCATGC 1 cut(s) 539
PfeI GAWTC 2 cut(s) 248, 807
PkrI GCNGC 4 cut(s) 16, 312, 523, 652
Psp1406I AACGTT 1 cut(s) 221
Psp6I CCWGG 2 cut(s) 77, 276
PspGI CCWGG 2 cut(s) 77, 276
PspN4I GGNNCC 1 cut(s) 282
PspPI GGNCC 2 cut(s) 794, 799
PsuI RGATCY 3 cut(s) 333, 487, 580
RsaI GTAC 1 cut(s) 702
RsaNI GTAC 1 cut(s) 701
SaqAI TTAA 2 cut(s) 513, 549
SatI GCNGC 4 cut(s) 15, 311, 522, 651
Sau3AI GATC 7 cut(s) 169, 265, 295, 327, 333, 487, 580
Sau96I GGNCC 2 cut(s) 794, 799
ScrFI CCNGG 2 cut(s) 79, 278
SetI ASST 7 cut(s) 155, 224, 237, 394, 511, 519, 616
SfaNI GCATC 2 cut(s) 665, 723
SinI GGWCC 1 cut(s) 799
SmlI CTYRAG 1 cut(s) 212
SmoI CTYRAG 1 cut(s) 212
SphI GCATGC 1 cut(s) 539
Sse9I AATT 4 cut(s) 112, 400, 418, 730
SsiI CCGC 1 cut(s) 645
SspI AATATT 1 cut(s) 544
SspMI CTAG 7 cut(s) 11, 66, 140, 285, 458, 518, 672
StyD4I CCNGG 2 cut(s) 77, 276
StyI CCWWGG 2 cut(s) 284, 525
TaaI ACNGT 3 cut(s) 561, 599, 709
TaiI ACGT 1 cut(s) 224
TaqI TCGA 1 cut(s) 747
TasI AATT 4 cut(s) 112, 400, 418, 730
TatI WGTACW 1 cut(s) 700
TfiI GAWTC 2 cut(s) 248, 807
Tru1I TTAA 2 cut(s) 513, 549
Tru9I TTAA 2 cut(s) 513, 549
TscAI CASTG 1 cut(s) 480
TseI GCWGC 4 cut(s) 14, 310, 521, 650
TspDTI ATGAA 2 cut(s) 258, 402
TspGWI ACGGA 1 cut(s) 356
TspRI CASTG 1 cut(s) 480
VpaK11BI GGWCC 1 cut(s) 799
XapI RAATTY 1 cut(s) 112
XceI RCATGY 1 cut(s) 539
XmaJI CCTAGG 1 cut(s) 284
XspI CTAG 7 cut(s) 11, 66, 140, 285, 458, 518, 672
Zsp2I ATGCAT 1 cut(s) 680
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.