protein ubiquitination
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Ank_2 | PF12796 | 101 - 173 | 3.3e-08 | Ankyrin repeats (3 copies) |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 507 |
| AccB1I | GGYRCC | 1 cut(s) | 507 |
| AccII | CGCG | 1 cut(s) | 42 |
| AciI | CCGC | 5 cut(s) | 35, 40, 74, 142, 145 |
| AclWI | GGATC | 1 cut(s) | 130 |
| AdeI | CACNNNGTG | 1 cut(s) | 647 |
| AfaI | GTAC | 2 cut(s) | 45, 509 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 145, 394, 551 |
| AgsI | TTSAA | 2 cut(s) | 111, 280 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 91, 123 |
| AluBI | AGCT | 4 cut(s) | 10, 82, 257, 304 |
| AluI | AGCT | 4 cut(s) | 10, 82, 257, 304 |
| Alw26I | GTCTC | 1 cut(s) | 375 |
| AlwI | GGATC | 1 cut(s) | 130 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 427 |
| AoxI | GGCC | 2 cut(s) | 37, 553 |
| ApeKI | GCWGC | 5 cut(s) | 82, 167, 374, 450, 476 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 241 |
| Asp718I | GGTACC | 1 cut(s) | 507 |
| AspS9I | GGNCC | 2 cut(s) | 37, 554 |
| AsuHPI | GGTGA | 3 cut(s) | 194, 319, 674 |
| BanI | GGYRCC | 1 cut(s) | 507 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 36, 68 |
| BbvI | GCAGC | 5 cut(s) | 69, 154, 361, 462, 463 |
| BccI | CCATC | 2 cut(s) | 344, 486 |
| BceAI | ACGGC | 2 cut(s) | 375, 577 |
| BciVI | GTATCC | 1 cut(s) | 84 |
| BcoDI | GTCTC | 1 cut(s) | 375 |
| BfaI | CTAG | 3 cut(s) | 345, 378, 533 |
| BfuI | GTATCC | 1 cut(s) | 84 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 561 |
| BglII | AGATCT | 1 cut(s) | 535 |
| BisI | GCNGC | 7 cut(s) | 40, 83, 143, 168, 375, 451, 477 |
| BlsI | GCNGC | 7 cut(s) | 41, 84, 144, 169, 376, 452, 478 |
| BmgT120I | GGNCC | 2 cut(s) | 37, 554 |
| BmiI | GGNNCC | 1 cut(s) | 509 |
| BmsI | GCATC | 1 cut(s) | 214 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 372, 404 |
| BsaBI | GATNNNNATC | 1 cut(s) | 470 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 145, 394, 551 |
| Bse3DI | GCAATG | 1 cut(s) | 435 |
| Bse8I | GATNNNNATC | 1 cut(s) | 470 |
| BseJI | GATNNNNATC | 1 cut(s) | 470 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 145, 394, 551 |
| BseMI | GCAATG | 1 cut(s) | 435 |
| BseXI | GCAGC | 5 cut(s) | 69, 154, 361, 462, 463 |
| BsgI | GTGCAG | 1 cut(s) | 624 |
| Bsh1236I | CGCG | 1 cut(s) | 42 |
| BshFI | GGCC | 2 cut(s) | 39, 555 |
| BshNI | GGYRCC | 1 cut(s) | 507 |
| BsiSI | CCGG | 2 cut(s) | 5, 441 |
| BslFI | GGGAC | 1 cut(s) | 265 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 145, 394, 551 |
| BsmAI | GTCTC | 1 cut(s) | 375 |
| BsmFI | GGGAC | 1 cut(s) | 265 |
| BsnI | GGCC | 2 cut(s) | 39, 555 |
| Bsp143I | GATC | 3 cut(s) | 135, 517, 535 |
| BspACI | CCGC | 5 cut(s) | 35, 40, 74, 142, 145 |
| BspANI | GGCC | 2 cut(s) | 39, 555 |
| BspFNI | CGCG | 1 cut(s) | 42 |
| BspHI | TCATGA | 1 cut(s) | 315 |
| BspLI | GGNNCC | 1 cut(s) | 509 |
| BspPI | GGATC | 1 cut(s) | 130 |
| BspQI | GCTCTTC | 2 cut(s) | 264, 294 |
| BspT107I | GGYRCC | 1 cut(s) | 507 |
| BsrDI | GCAATG | 1 cut(s) | 435 |
| BssMI | GATC | 3 cut(s) | 135, 517, 535 |
| Bst4CI | ACNGT | 2 cut(s) | 107, 645 |
| Bst6I | CTCTTC | 3 cut(s) | 264, 294, 518 |
| BstC8I | GCNNGC | 2 cut(s) | 17, 37 |
| BstFNI | CGCG | 1 cut(s) | 42 |
| BstKTI | GATC | 3 cut(s) | 138, 520, 538 |
| BstMAI | GTCTC | 1 cut(s) | 375 |
| BstMBI | GATC | 3 cut(s) | 135, 517, 535 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 16, 82, 374, 561 |
| BstNSI | RCATGY | 1 cut(s) | 19 |
| BstUI | CGCG | 1 cut(s) | 42 |
| BstV1I | GCAGC | 5 cut(s) | 69, 154, 361, 462, 463 |
| BstX2I | RGATCY | 2 cut(s) | 135, 535 |
| BstYI | RGATCY | 2 cut(s) | 135, 535 |
| BsuI | GTATCC | 1 cut(s) | 84 |
| BsuRI | GGCC | 2 cut(s) | 39, 555 |
| BtsIMutI | CAGTG | 2 cut(s) | 103, 641 |
| Cac8I | GCNNGC | 2 cut(s) | 17, 37 |
| CaiI | CAGNNNCTG | 1 cut(s) | 427 |
| CciI | TCATGA | 1 cut(s) | 315 |
| Cfr13I | GGNCC | 2 cut(s) | 37, 554 |
| Csp6I | GTAC | 2 cut(s) | 44, 508 |
| CviAII | CATG | 5 cut(s) | 16, 191, 316, 485, 548 |
| CviJI | RGCY | 9 cut(s) | 10, 39, 82, 257, 304, 362, 453, 555, 564 |
| CviKI_1 | RGCY | 9 cut(s) | 10, 39, 82, 257, 304, 362, 453, 555, 564 |
| CviQI | GTAC | 2 cut(s) | 44, 508 |
| DpnI | GATC | 3 cut(s) | 137, 519, 537 |
| DpnII | GATC | 3 cut(s) | 135, 517, 535 |
| DraIII | CACNNNGTG | 1 cut(s) | 647 |
| Eam1104I | CTCTTC | 3 cut(s) | 264, 294, 518 |
| EarI | CTCTTC | 3 cut(s) | 264, 294, 518 |
| EcoO109I | RGGNCCY | 1 cut(s) | 554 |
| EcoT22I | ATGCAT | 2 cut(s) | 407, 486 |
| FaeI | CATG | 5 cut(s) | 19, 194, 319, 488, 551 |
| FaqI | GGGAC | 1 cut(s) | 265 |
| FatI | CATG | 5 cut(s) | 15, 190, 315, 484, 547 |
| FauI | CCCGC | 2 cut(s) | 28, 138 |
| Fnu4HI | GCNGC | 7 cut(s) | 40, 83, 143, 168, 375, 451, 477 |
| Fsp4HI | GCNGC | 7 cut(s) | 40, 83, 143, 168, 375, 451, 477 |
| FspBI | CTAG | 3 cut(s) | 345, 378, 533 |
| GluI | GCNGC | 7 cut(s) | 40, 83, 143, 168, 375, 451, 477 |
| HaeIII | GGCC | 2 cut(s) | 39, 555 |
| HapII | CCGG | 2 cut(s) | 5, 441 |
| Hin1II | CATG | 5 cut(s) | 19, 194, 319, 488, 551 |
| HinfI | GANTC | 4 cut(s) | 242, 460, 466, 627 |
| HpaII | CCGG | 2 cut(s) | 5, 441 |
| HphI | GGTGA | 3 cut(s) | 194, 319, 674 |
| Hpy188I | TCNGA | 1 cut(s) | 465 |
| Hpy188III | TCNNGA | 2 cut(s) | 209, 316 |
| HpyAV | CCTTC | 3 cut(s) | 62, 313, 545 |
| HpyCH4III | ACNGT | 2 cut(s) | 107, 645 |
| HpyCH4V | TGCA | 6 cut(s) | 15, 19, 227, 405, 484, 641 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 16, 82, 374, 561 |
| Hsp92II | CATG | 5 cut(s) | 19, 194, 319, 488, 551 |
| KpnI | GGTACC | 1 cut(s) | 511 |
| Kzo9I | GATC | 3 cut(s) | 135, 517, 535 |
| LguI | GCTCTTC | 2 cut(s) | 264, 294 |
| LmnI | GCTCC | 2 cut(s) | 7, 286 |
| LpnPI | CCDG | 8 cut(s) | 18, 152, 216, 269, 290, 434, 440, 454 |
| Lsp1109I | GCAGC | 5 cut(s) | 69, 154, 361, 462, 463 |
| LweI | GCATC | 1 cut(s) | 214 |
| MaeI | CTAG | 3 cut(s) | 345, 378, 533 |
| MaeIII | GTNAC | 3 cut(s) | 61, 409, 605 |
| MalI | GATC | 3 cut(s) | 137, 519, 537 |
| MboI | GATC | 3 cut(s) | 135, 517, 535 |
| MboII | GAAGA | 5 cut(s) | 154, 251, 311, 338, 505 |
| MflI | RGATCY | 2 cut(s) | 135, 535 |
| MluCI | AATT | 4 cut(s) | 291, 329, 599, 631 |
| MlyI | GAGTC | 1 cut(s) | 454 |
| MmeI | TCCRAC | 2 cut(s) | 48, 335 |
| MnlI | CCTC | 5 cut(s) | 171, 316, 398, 439, 521 |
| Mph1103I | ATGCAT | 2 cut(s) | 407, 486 |
| MroXI | GAANNNNTTC | 1 cut(s) | 241 |
| MseI | TTAA | 3 cut(s) | 611, 621, 691 |
| MslI | CAYNNNNRTG | 1 cut(s) | 222 |
| MspA1I | CMGCKG | 1 cut(s) | 142 |
| MspI | CCGG | 2 cut(s) | 5, 441 |
| MvnI | CGCG | 1 cut(s) | 42 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 16, 82, 374, 561 |
| NdeII | GATC | 3 cut(s) | 135, 517, 535 |
| NlaIII | CATG | 5 cut(s) | 19, 194, 319, 488, 551 |
| NlaIV | GGNNCC | 1 cut(s) | 509 |
| NmuCI | GTSAC | 1 cut(s) | 61 |
| NsiI | ATGCAT | 2 cut(s) | 407, 486 |
| NspI | RCATGY | 1 cut(s) | 19 |
| PaeI | GCATGC | 1 cut(s) | 19 |
| PagI | TCATGA | 1 cut(s) | 315 |
| PciSI | GCTCTTC | 2 cut(s) | 264, 294 |
| PdmI | GAANNNNTTC | 1 cut(s) | 241 |
| PfeI | GAWTC | 3 cut(s) | 242, 466, 627 |
| PkrI | GCNGC | 7 cut(s) | 41, 84, 144, 169, 376, 452, 478 |
| PleI | GAGTC | 1 cut(s) | 454 |
| PpsI | GAGTC | 1 cut(s) | 454 |
| PspN4I | GGNNCC | 1 cut(s) | 509 |
| PspPI | GGNCC | 2 cut(s) | 37, 554 |
| PstNI | CAGNNNCTG | 1 cut(s) | 427 |
| PsuI | RGATCY | 2 cut(s) | 135, 535 |
| RsaI | GTAC | 2 cut(s) | 45, 509 |
| RsaNI | GTAC | 2 cut(s) | 44, 508 |
| RseI | CAYNNNNRTG | 1 cut(s) | 222 |
| SapI | GCTCTTC | 2 cut(s) | 264, 294 |
| SaqAI | TTAA | 3 cut(s) | 611, 621, 691 |
| SatI | GCNGC | 7 cut(s) | 40, 83, 143, 168, 375, 451, 477 |
| Sau3AI | GATC | 3 cut(s) | 135, 517, 535 |
| Sau96I | GGNCC | 2 cut(s) | 37, 554 |
| SchI | GAGTC | 1 cut(s) | 454 |
| SetI | ASST | 8 cut(s) | 12, 84, 160, 259, 306, 390, 429, 513 |
| SfaNI | GCATC | 1 cut(s) | 214 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 222 |
| SphI | GCATGC | 1 cut(s) | 19 |
| Sse9I | AATT | 4 cut(s) | 291, 329, 599, 631 |
| SsiI | CCGC | 5 cut(s) | 35, 40, 74, 142, 145 |
| SspI | AATATT | 1 cut(s) | 276 |
| SspMI | CTAG | 3 cut(s) | 345, 378, 533 |
| TaaI | ACNGT | 2 cut(s) | 107, 645 |
| TaqI | TCGA | 1 cut(s) | 516 |
| TaqII | GACCGA | 1 cut(s) | 504 |
| TasI | AATT | 4 cut(s) | 291, 329, 599, 631 |
| TauI | GCSGC | 2 cut(s) | 42, 145 |
| TfiI | GAWTC | 3 cut(s) | 242, 466, 627 |
| Tru1I | TTAA | 3 cut(s) | 611, 621, 691 |
| Tru9I | TTAA | 3 cut(s) | 611, 621, 691 |
| TscAI | CASTG | 2 cut(s) | 110, 648 |
| TseFI | GTSAC | 1 cut(s) | 61 |
| TseI | GCWGC | 5 cut(s) | 82, 167, 374, 450, 476 |
| Tsp45I | GTSAC | 1 cut(s) | 61 |
| TspDTI | ATGAA | 5 cut(s) | 207, 234, 304, 332, 564 |
| TspGWI | ACGGA | 1 cut(s) | 49 |
| TspRI | CASTG | 2 cut(s) | 110, 648 |
| XceI | RCATGY | 1 cut(s) | 19 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 428 |
| XmnI | GAANNNNTTC | 1 cut(s) | 241 |
| XspI | CTAG | 3 cut(s) | 345, 378, 533 |
| Zsp2I | ATGCAT | 2 cut(s) | 407, 486 |