protein ubiquitination
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| PGG | PF13962 | 206 - 317 | 1.6e-21 | Domain of unknown function |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 339, 767 |
| AciI | CCGC | 4 cut(s) | 79, 732, 939, 1059 |
| AclI | AACGTT | 1 cut(s) | 809 |
| AclWI | GGATC | 2 cut(s) | 307, 362 |
| AcsI | RAATTY | 2 cut(s) | 119, 825 |
| AfaI | GTAC | 4 cut(s) | 264, 500, 522, 1070 |
| AgsI | TTSAA | 3 cut(s) | 119, 1002, 1087 |
| AjiI | CACGTC | 1 cut(s) | 834 |
| AjnI | CCWGG | 5 cut(s) | 67, 204, 460, 703, 971 |
| AluBI | AGCT | 2 cut(s) | 10, 406 |
| AluI | AGCT | 2 cut(s) | 10, 406 |
| Alw21I | GWGCWC | 1 cut(s) | 664 |
| Alw26I | GTCTC | 2 cut(s) | 506, 626 |
| AlwI | GGATC | 2 cut(s) | 307, 362 |
| ApeKI | GCWGC | 4 cut(s) | 467, 481, 686, 941 |
| ApoI | RAATTY | 2 cut(s) | 119, 825 |
| AsuHPI | GGTGA | 2 cut(s) | 382, 395 |
| AsuII | TTCGAA | 2 cut(s) | 50, 362 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 504, 537 |
| Bbv12I | GWGCWC | 1 cut(s) | 664 |
| BbvI | GCAGC | 4 cut(s) | 479, 493, 673, 928 |
| BccI | CCATC | 2 cut(s) | 439, 683 |
| BceAI | ACGGC | 1 cut(s) | 651 |
| BciT130I | CCWGG | 5 cut(s) | 69, 206, 462, 705, 973 |
| BcoDI | GTCTC | 2 cut(s) | 506, 626 |
| BfaI | CTAG | 1 cut(s) | 1046 |
| BfmI | CTRYAG | 1 cut(s) | 687 |
| BisI | GCNGC | 4 cut(s) | 468, 482, 687, 942 |
| BlsI | GCNGC | 4 cut(s) | 469, 483, 688, 943 |
| Bme1390I | CCNGG | 5 cut(s) | 69, 206, 462, 705, 973 |
| BmgBI | CACGTC | 1 cut(s) | 834 |
| BmrFI | CCNGG | 5 cut(s) | 69, 206, 462, 705, 973 |
| BmsI | GCATC | 2 cut(s) | 766, 1020 |
| BpmI | CTGGAG | 1 cut(s) | 726 |
| Bpu14I | TTCGAA | 2 cut(s) | 50, 362 |
| Bsa29I | ATCGAT | 1 cut(s) | 741 |
| BsaAI | YACGTR | 1 cut(s) | 1068 |
| BsaJI | CCNNGG | 2 cut(s) | 461, 569 |
| Bse118I | RCCGGY | 1 cut(s) | 722 |
| Bse1I | ACTGG | 1 cut(s) | 1010 |
| Bse3DI | GCAATG | 1 cut(s) | 470 |
| BseBI | CCWGG | 5 cut(s) | 69, 206, 462, 705, 973 |
| BseCI | ATCGAT | 1 cut(s) | 741 |
| BseDI | CCNNGG | 2 cut(s) | 461, 569 |
| BseGI | GGATG | 2 cut(s) | 630, 1035 |
| BseMI | GCAATG | 1 cut(s) | 470 |
| BseNI | ACTGG | 1 cut(s) | 1010 |
| BseXI | GCAGC | 4 cut(s) | 479, 493, 673, 928 |
| BseYI | CCCAGC | 1 cut(s) | 416 |
| BsgI | GTGCAG | 1 cut(s) | 420 |
| BshVI | ATCGAT | 1 cut(s) | 741 |
| BsiHKAI | GWGCWC | 1 cut(s) | 664 |
| BsiSI | CCGG | 1 cut(s) | 723 |
| BsiWI | CGTACG | 1 cut(s) | 1068 |
| BslFI | GGGAC | 1 cut(s) | 412 |
| BsmAI | GTCTC | 2 cut(s) | 506, 626 |
| BsmBI | CGTCTC | 1 cut(s) | 626 |
| BsmFI | GGGAC | 1 cut(s) | 412 |
| BsmI | GAATGC | 1 cut(s) | 734 |
| Bsp119I | TTCGAA | 2 cut(s) | 50, 362 |
| Bsp1286I | GDGCHC | 1 cut(s) | 664 |
| Bsp143I | GATC | 3 cut(s) | 191, 312, 354 |
| BspACI | CCGC | 4 cut(s) | 79, 732, 939, 1059 |
| BspDI | ATCGAT | 1 cut(s) | 741 |
| BspMAI | CTGCAG | 1 cut(s) | 691 |
| BspPI | GGATC | 2 cut(s) | 307, 362 |
| BspT104I | TTCGAA | 2 cut(s) | 50, 362 |
| BsrDI | GCAATG | 1 cut(s) | 470 |
| BsrFI | RCCGGY | 1 cut(s) | 722 |
| BsrI | ACTGG | 1 cut(s) | 1010 |
| BssAI | RCCGGY | 1 cut(s) | 722 |
| BssECI | CCNNGG | 2 cut(s) | 461, 569 |
| BssMI | GATC | 3 cut(s) | 191, 312, 354 |
| BssT1I | CCWWGG | 1 cut(s) | 569 |
| Bst2UI | CCWGG | 5 cut(s) | 69, 206, 462, 705, 973 |
| Bst4CI | ACNGT | 1 cut(s) | 596 |
| Bst6I | CTCTTC | 3 cut(s) | 135, 364, 1069 |
| BstBAI | YACGTR | 1 cut(s) | 1068 |
| BstBI | TTCGAA | 2 cut(s) | 50, 362 |
| BstC8I | GCNNGC | 1 cut(s) | 12 |
| BstDEI | CTNAG | 1 cut(s) | 32 |
| BstF5I | GGATG | 2 cut(s) | 630, 1035 |
| BstKTI | GATC | 3 cut(s) | 194, 315, 357 |
| BstMAI | GTCTC | 2 cut(s) | 506, 626 |
| BstMBI | GATC | 3 cut(s) | 191, 312, 354 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 481, 938 |
| BstNI | CCWGG | 5 cut(s) | 69, 206, 462, 705, 973 |
| BstSCI | CCNGG | 5 cut(s) | 67, 204, 460, 703, 971 |
| BstSFI | CTRYAG | 1 cut(s) | 687 |
| BstSNI | TACGTA | 1 cut(s) | 1068 |
| BstV1I | GCAGC | 4 cut(s) | 479, 493, 673, 928 |
| BstX2I | RGATCY | 1 cut(s) | 354 |
| BstYI | RGATCY | 1 cut(s) | 354 |
| Bsu15I | ATCGAT | 1 cut(s) | 741 |
| BsuTUI | ATCGAT | 1 cut(s) | 741 |
| BtrI | CACGTC | 1 cut(s) | 834 |
| BtsCI | GGATG | 2 cut(s) | 630, 1035 |
| Cac8I | GCNNGC | 1 cut(s) | 12 |
| Cfr10I | RCCGGY | 1 cut(s) | 722 |
| ClaI | ATCGAT | 1 cut(s) | 741 |
| Csp6I | GTAC | 4 cut(s) | 263, 499, 521, 1069 |
| CviAII | CATG | 6 cut(s) | 104, 133, 377, 412, 679, 922 |
| CviJI | RGCY | 7 cut(s) | 10, 43, 209, 406, 416, 726, 911 |
| CviKI_1 | RGCY | 7 cut(s) | 10, 43, 209, 406, 416, 726, 911 |
| CviQI | GTAC | 4 cut(s) | 263, 499, 521, 1069 |
| DdeI | CTNAG | 1 cut(s) | 32 |
| DpnI | GATC | 3 cut(s) | 193, 314, 356 |
| DpnII | GATC | 3 cut(s) | 191, 312, 354 |
| DraI | TTTAAA | 1 cut(s) | 126 |
| Eam1104I | CTCTTC | 3 cut(s) | 135, 364, 1069 |
| EarI | CTCTTC | 3 cut(s) | 135, 364, 1069 |
| Eco105I | TACGTA | 1 cut(s) | 1068 |
| Eco130I | CCWWGG | 1 cut(s) | 569 |
| EcoRI | GAATTC | 1 cut(s) | 825 |
| EcoRII | CCWGG | 5 cut(s) | 67, 204, 460, 703, 971 |
| EcoT14I | CCWWGG | 1 cut(s) | 569 |
| ErhI | CCWWGG | 1 cut(s) | 569 |
| Esp3I | CGTCTC | 1 cut(s) | 626 |
| FaeI | CATG | 6 cut(s) | 107, 136, 380, 415, 682, 925 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 432, 464 |
| FaqI | GGGAC | 1 cut(s) | 412 |
| FatI | CATG | 6 cut(s) | 103, 132, 376, 411, 678, 921 |
| FauI | CCCGC | 1 cut(s) | 739 |
| Fnu4HI | GCNGC | 4 cut(s) | 468, 482, 687, 942 |
| FokI | GGATG | 2 cut(s) | 637, 1042 |
| Fsp4HI | GCNGC | 4 cut(s) | 468, 482, 687, 942 |
| FspBI | CTAG | 1 cut(s) | 1046 |
| GluI | GCNGC | 4 cut(s) | 468, 482, 687, 942 |
| GsaI | CCCAGC | 1 cut(s) | 420 |
| GsuI | CTGGAG | 1 cut(s) | 726 |
| HapII | CCGG | 1 cut(s) | 723 |
| Hin1II | CATG | 6 cut(s) | 107, 136, 380, 415, 682, 925 |
| HincII | GTYRAC | 1 cut(s) | 813 |
| HindII | GTYRAC | 1 cut(s) | 813 |
| HinfI | GANTC | 4 cut(s) | 72, 287, 589, 982 |
| HpaII | CCGG | 1 cut(s) | 723 |
| HphI | GGTGA | 2 cut(s) | 382, 395 |
| Hpy166II | GTNNAC | 5 cut(s) | 109, 488, 557, 813, 965 |
| Hpy188I | TCNGA | 4 cut(s) | 25, 775, 824, 987 |
| Hpy188III | TCNNGA | 5 cut(s) | 276, 291, 326, 536, 859 |
| Hpy8I | GTNNAC | 5 cut(s) | 109, 488, 557, 813, 965 |
| HpyAV | CCTTC | 2 cut(s) | 211, 1052 |
| HpyCH4III | ACNGT | 1 cut(s) | 596 |
| HpyCH4IV | ACGT | 6 cut(s) | 306, 809, 815, 833, 838, 1067 |
| HpyCH4V | TGCA | 8 cut(s) | 437, 475, 481, 689, 806, 845, 917, 1033 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 481, 938 |
| HpyF3I | CTNAG | 1 cut(s) | 32 |
| HpySE526I | ACGT | 6 cut(s) | 306, 809, 815, 833, 838, 1067 |
| Hsp92II | CATG | 6 cut(s) | 107, 136, 380, 415, 682, 925 |
| Kzo9I | GATC | 3 cut(s) | 191, 312, 354 |
| Lsp1109I | GCAGC | 4 cut(s) | 479, 493, 673, 928 |
| LweI | GCATC | 2 cut(s) | 766, 1020 |
| MaeI | CTAG | 1 cut(s) | 1046 |
| MaeII | ACGT | 6 cut(s) | 306, 809, 815, 833, 838, 1067 |
| MaeIII | GTNAC | 3 cut(s) | 383, 834, 1012 |
| MalI | GATC | 3 cut(s) | 193, 314, 356 |
| MboI | GATC | 3 cut(s) | 191, 312, 354 |
| MboII | GAAGA | 6 cut(s) | 152, 193, 351, 786, 860, 1086 |
| MflI | RGATCY | 1 cut(s) | 354 |
| MhlI | GDGCHC | 1 cut(s) | 664 |
| MluCI | AATT | 8 cut(s) | 119, 699, 749, 825, 885, 951, 1034, 1053 |
| MlyI | GAGTC | 2 cut(s) | 296, 583 |
| MmeI | TCCRAC | 1 cut(s) | 1010 |
| MnlI | CCTC | 6 cut(s) | 287, 361, 534, 604, 701, 1070 |
| MseI | TTAA | 2 cut(s) | 125, 450 |
| MslI | CAYNNNNRTG | 1 cut(s) | 381 |
| MspA1I | CMGCKG | 1 cut(s) | 941 |
| MspI | CCGG | 1 cut(s) | 723 |
| MspR9I | CCNGG | 5 cut(s) | 69, 206, 462, 705, 973 |
| Mva1269I | GAATGC | 1 cut(s) | 734 |
| MvaI | CCWGG | 5 cut(s) | 69, 206, 462, 705, 973 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 481, 938 |
| NdeII | GATC | 3 cut(s) | 191, 312, 354 |
| NlaIII | CATG | 6 cut(s) | 107, 136, 380, 415, 682, 925 |
| NmuCI | GTSAC | 3 cut(s) | 383, 834, 1012 |
| NspV | TTCGAA | 2 cut(s) | 50, 362 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 806 |
| PctI | GAATGC | 1 cut(s) | 734 |
| PfeI | GAWTC | 2 cut(s) | 72, 982 |
| Pfl23II | CGTACG | 1 cut(s) | 1068 |
| PfoI | TCCNGGA | 2 cut(s) | 703, 971 |
| PkrI | GCNGC | 4 cut(s) | 469, 483, 688, 943 |
| PleI | GAGTC | 2 cut(s) | 295, 583 |
| PpsI | GAGTC | 2 cut(s) | 295, 583 |
| Ppu21I | YACGTR | 1 cut(s) | 1068 |
| PsiI | TTATAA | 2 cut(s) | 339, 767 |
| Psp1406I | AACGTT | 1 cut(s) | 809 |
| Psp6I | CCWGG | 5 cut(s) | 67, 204, 460, 703, 971 |
| PspFI | CCCAGC | 1 cut(s) | 416 |
| PspGI | CCWGG | 5 cut(s) | 67, 204, 460, 703, 971 |
| PspLI | CGTACG | 1 cut(s) | 1068 |
| PstI | CTGCAG | 1 cut(s) | 691 |
| PsuI | RGATCY | 1 cut(s) | 354 |
| RsaI | GTAC | 4 cut(s) | 264, 500, 522, 1070 |
| RsaNI | GTAC | 4 cut(s) | 263, 499, 521, 1069 |
| RseI | CAYNNNNRTG | 1 cut(s) | 381 |
| SaqAI | TTAA | 2 cut(s) | 125, 450 |
| SatI | GCNGC | 4 cut(s) | 468, 482, 687, 942 |
| Sau3AI | GATC | 3 cut(s) | 191, 312, 354 |
| SchI | GAGTC | 2 cut(s) | 296, 583 |
| ScrFI | CCNGG | 5 cut(s) | 69, 206, 462, 705, 973 |
| SduI | GDGCHC | 1 cut(s) | 664 |
| SfaNI | GCATC | 2 cut(s) | 766, 1020 |
| SfcI | CTRYAG | 1 cut(s) | 687 |
| SfuI | TTCGAA | 2 cut(s) | 50, 362 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 381 |
| SnaBI | TACGTA | 1 cut(s) | 1068 |
| Sse9I | AATT | 8 cut(s) | 119, 699, 749, 825, 885, 951, 1034, 1053 |
| SsiI | CCGC | 4 cut(s) | 79, 732, 939, 1059 |
| SspI | AATATT | 1 cut(s) | 1083 |
| SspMI | CTAG | 1 cut(s) | 1046 |
| StyD4I | CCNGG | 5 cut(s) | 67, 204, 460, 703, 971 |
| StyI | CCWWGG | 1 cut(s) | 569 |
| TaaI | ACNGT | 1 cut(s) | 596 |
| TaiI | ACGT | 6 cut(s) | 309, 812, 818, 836, 841, 1070 |
| TaqI | TCGA | 3 cut(s) | 50, 362, 741 |
| TasI | AATT | 8 cut(s) | 119, 699, 749, 825, 885, 951, 1034, 1053 |
| TatI | WGTACW | 1 cut(s) | 262 |
| TfiI | GAWTC | 2 cut(s) | 72, 982 |
| Tru1I | TTAA | 2 cut(s) | 125, 450 |
| Tru9I | TTAA | 2 cut(s) | 125, 450 |
| TseFI | GTSAC | 3 cut(s) | 383, 834, 1012 |
| TseI | GCWGC | 4 cut(s) | 467, 481, 686, 941 |
| Tsp45I | GTSAC | 3 cut(s) | 383, 834, 1012 |
| TspDTI | ATGAA | 7 cut(s) | 102, 107, 121, 179, 641, 727, 759 |
| TspGWI | ACGGA | 1 cut(s) | 1086 |
| XapI | RAATTY | 2 cut(s) | 119, 825 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 904 |
| XspI | CTAG | 1 cut(s) | 1046 |