protein ubiquitination
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 19 |
| Acc36I | ACCTGC | 1 cut(s) | 407 |
| AciI | CCGC | 1 cut(s) | 305 |
| AcsI | RAATTY | 1 cut(s) | 796 |
| AcuI | CTGAAG | 1 cut(s) | 561 |
| AfaI | GTAC | 3 cut(s) | 216, 340, 427 |
| AgsI | TTSAA | 2 cut(s) | 155, 492 |
| AjiI | CACGTC | 1 cut(s) | 528 |
| AjnI | CCWGG | 3 cut(s) | 36, 394, 769 |
| AluBI | AGCT | 1 cut(s) | 164 |
| AluI | AGCT | 1 cut(s) | 164 |
| Alw21I | GWGCWC | 2 cut(s) | 355, 450 |
| Alw26I | GTCTC | 1 cut(s) | 9 |
| AoxI | GGCC | 2 cut(s) | 39, 583 |
| ApeKI | GCWGC | 3 cut(s) | 161, 377, 380 |
| ApoI | RAATTY | 1 cut(s) | 796 |
| AseI | ATTAAT | 2 cut(s) | 144, 756 |
| AspLEI | GCGC | 1 cut(s) | 20 |
| AspS9I | GGNCC | 1 cut(s) | 767 |
| AsuHPI | GGTGA | 4 cut(s) | 355, 410, 442, 583 |
| AvaII | GGWCC | 1 cut(s) | 767 |
| AxyI | CCTNAGG | 1 cut(s) | 222 |
| BbsI | GAAGAC | 1 cut(s) | 260 |
| Bbv12I | GWGCWC | 2 cut(s) | 355, 450 |
| BbvI | GCAGC | 3 cut(s) | 173, 364, 392 |
| BciT130I | CCWGG | 3 cut(s) | 38, 396, 771 |
| BcoDI | GTCTC | 1 cut(s) | 9 |
| BfmI | CTRYAG | 1 cut(s) | 378 |
| BfuAI | ACCTGC | 1 cut(s) | 407 |
| BisI | GCNGC | 3 cut(s) | 162, 378, 381 |
| BlsI | GCNGC | 3 cut(s) | 163, 379, 382 |
| Bme1390I | CCNGG | 3 cut(s) | 38, 396, 771 |
| Bme18I | GGWCC | 1 cut(s) | 767 |
| BmgBI | CACGTC | 1 cut(s) | 528 |
| BmgT120I | GGNCC | 1 cut(s) | 767 |
| BmrFI | CCNGG | 3 cut(s) | 38, 396, 771 |
| BmsI | GCATC | 3 cut(s) | 40, 460, 714 |
| BpiI | GAAGAC | 1 cut(s) | 260 |
| BpuEI | CTTGAG | 1 cut(s) | 674 |
| Bsa29I | ATCGAT | 2 cut(s) | 48, 668 |
| Bse1I | ACTGG | 2 cut(s) | 696, 704 |
| Bse21I | CCTNAGG | 1 cut(s) | 222 |
| Bse3DI | GCAATG | 1 cut(s) | 606 |
| BseBI | CCWGG | 3 cut(s) | 38, 396, 771 |
| BseCI | ATCGAT | 2 cut(s) | 48, 668 |
| BseGI | GGATG | 1 cut(s) | 217 |
| BseMI | GCAATG | 1 cut(s) | 606 |
| BseNI | ACTGG | 2 cut(s) | 696, 704 |
| BseXI | GCAGC | 3 cut(s) | 173, 364, 392 |
| BsgI | GTGCAG | 1 cut(s) | 180 |
| Bsh1285I | CGRYCG | 1 cut(s) | 48 |
| BshFI | GGCC | 2 cut(s) | 41, 585 |
| BshVI | ATCGAT | 2 cut(s) | 48, 668 |
| BsiEI | CGRYCG | 1 cut(s) | 48 |
| BsiHKAI | GWGCWC | 2 cut(s) | 355, 450 |
| BsmAI | GTCTC | 1 cut(s) | 9 |
| BsmI | GAATGC | 2 cut(s) | 383, 519 |
| BsnI | GGCC | 2 cut(s) | 41, 585 |
| Bsp1286I | GDGCHC | 2 cut(s) | 355, 450 |
| Bsp1407I | TGTACA | 2 cut(s) | 214, 338 |
| Bsp143I | GATC | 2 cut(s) | 45, 85 |
| BspACI | CCGC | 1 cut(s) | 305 |
| BspANI | GGCC | 2 cut(s) | 41, 585 |
| BspDI | ATCGAT | 2 cut(s) | 48, 668 |
| BspMAI | CTGCAG | 1 cut(s) | 382 |
| BspMI | ACCTGC | 1 cut(s) | 407 |
| BsrDI | GCAATG | 1 cut(s) | 606 |
| BsrGI | TGTACA | 2 cut(s) | 214, 338 |
| BsrI | ACTGG | 2 cut(s) | 696, 704 |
| BssMI | GATC | 2 cut(s) | 45, 85 |
| Bst2UI | CCWGG | 3 cut(s) | 38, 396, 771 |
| Bst4CI | ACNGT | 2 cut(s) | 115, 343 |
| BstAUI | TGTACA | 2 cut(s) | 214, 338 |
| BstC8I | GCNNGC | 1 cut(s) | 693 |
| BstDEI | CTNAG | 1 cut(s) | 222 |
| BstF5I | GGATG | 1 cut(s) | 217 |
| BstHHI | GCGC | 1 cut(s) | 20 |
| BstKTI | GATC | 2 cut(s) | 48, 88 |
| BstMAI | GTCTC | 1 cut(s) | 9 |
| BstMBI | GATC | 2 cut(s) | 45, 85 |
| BstMCI | CGRYCG | 1 cut(s) | 48 |
| BstNI | CCWGG | 3 cut(s) | 38, 396, 771 |
| BstSCI | CCNGG | 3 cut(s) | 36, 394, 769 |
| BstSFI | CTRYAG | 1 cut(s) | 378 |
| BstV1I | GCAGC | 3 cut(s) | 173, 364, 392 |
| BstV2I | GAAGAC | 1 cut(s) | 260 |
| Bsu15I | ATCGAT | 2 cut(s) | 48, 668 |
| Bsu36I | CCTNAGG | 1 cut(s) | 222 |
| BsuRI | GGCC | 2 cut(s) | 41, 585 |
| BsuTUI | ATCGAT | 2 cut(s) | 48, 668 |
| BtrI | CACGTC | 1 cut(s) | 528 |
| BtsCI | GGATG | 1 cut(s) | 217 |
| BtsIMutI | CAGTG | 1 cut(s) | 703 |
| BveI | ACCTGC | 1 cut(s) | 407 |
| Cac8I | GCNNGC | 1 cut(s) | 693 |
| CfoI | GCGC | 1 cut(s) | 20 |
| Cfr13I | GGNCC | 1 cut(s) | 767 |
| ClaI | ATCGAT | 2 cut(s) | 48, 668 |
| Csp6I | GTAC | 3 cut(s) | 215, 339, 426 |
| CviAII | CATG | 3 cut(s) | 508, 616, 636 |
| CviJI | RGCY | 3 cut(s) | 41, 164, 585 |
| CviKI_1 | RGCY | 3 cut(s) | 41, 164, 585 |
| CviQI | GTAC | 3 cut(s) | 215, 339, 426 |
| DdeI | CTNAG | 1 cut(s) | 222 |
| DpnI | GATC | 2 cut(s) | 47, 87 |
| DpnII | GATC | 2 cut(s) | 45, 85 |
| EciI | GGCGGA | 1 cut(s) | 320 |
| Eco147I | AGGCCT | 1 cut(s) | 585 |
| Eco47I | GGWCC | 1 cut(s) | 767 |
| Eco57I | CTGAAG | 1 cut(s) | 561 |
| Eco81I | CCTNAGG | 1 cut(s) | 222 |
| EcoRII | CCWGG | 3 cut(s) | 36, 394, 769 |
| FaeI | CATG | 3 cut(s) | 511, 619, 639 |
| FatI | CATG | 3 cut(s) | 507, 615, 635 |
| Fnu4HI | GCNGC | 3 cut(s) | 162, 378, 381 |
| FokI | GGATG | 1 cut(s) | 204 |
| Fsp4HI | GCNGC | 3 cut(s) | 162, 378, 381 |
| FspI | TGCGCA | 1 cut(s) | 19 |
| GlaI | GCGC | 1 cut(s) | 19 |
| GluI | GCNGC | 3 cut(s) | 162, 378, 381 |
| HaeIII | GGCC | 2 cut(s) | 41, 585 |
| HhaI | GCGC | 1 cut(s) | 20 |
| Hin1II | CATG | 3 cut(s) | 511, 619, 639 |
| Hin6I | GCGC | 1 cut(s) | 18 |
| HinP1I | GCGC | 1 cut(s) | 18 |
| HinfI | GANTC | 2 cut(s) | 233, 280 |
| HphI | GGTGA | 4 cut(s) | 355, 410, 442, 583 |
| Hpy166II | GTNNAC | 1 cut(s) | 241 |
| Hpy188I | TCNGA | 2 cut(s) | 469, 541 |
| Hpy8I | GTNNAC | 1 cut(s) | 241 |
| Hpy99I | CGWCG | 1 cut(s) | 426 |
| HpyAV | CCTTC | 1 cut(s) | 313 |
| HpyCH4III | ACNGT | 2 cut(s) | 115, 343 |
| HpyCH4IV | ACGT | 2 cut(s) | 527, 532 |
| HpyCH4V | TGCA | 6 cut(s) | 161, 169, 175, 380, 473, 727 |
| HpyF3I | CTNAG | 1 cut(s) | 222 |
| HpySE526I | ACGT | 2 cut(s) | 527, 532 |
| Hsp92II | CATG | 3 cut(s) | 511, 619, 639 |
| HspAI | GCGC | 1 cut(s) | 18 |
| Kzo9I | GATC | 2 cut(s) | 45, 85 |
| LpnPI | CCDG | 9 cut(s) | 23, 50, 381, 402, 408, 709, 717, 756, 783 |
| Lsp1109I | GCAGC | 3 cut(s) | 173, 364, 392 |
| LweI | GCATC | 3 cut(s) | 40, 460, 714 |
| MaeII | ACGT | 2 cut(s) | 527, 532 |
| MaeIII | GTNAC | 4 cut(s) | 135, 361, 528, 706 |
| MalI | GATC | 2 cut(s) | 47, 87 |
| MboI | GATC | 2 cut(s) | 45, 85 |
| MboII | GAAGA | 4 cut(s) | 265, 480, 554, 624 |
| MhlI | GDGCHC | 2 cut(s) | 355, 450 |
| MluCI | AATT | 6 cut(s) | 89, 100, 141, 290, 728, 796 |
| MnlI | CCTC | 7 cut(s) | 52, 69, 193, 295, 605, 649, 721 |
| MseI | TTAA | 4 cut(s) | 144, 195, 434, 756 |
| MslI | CAYNNNNRTG | 4 cut(s) | 368, 572, 617, 722 |
| MspR9I | CCNGG | 3 cut(s) | 38, 396, 771 |
| Mva1269I | GAATGC | 2 cut(s) | 383, 519 |
| MvaI | CCWGG | 3 cut(s) | 38, 396, 771 |
| NdeII | GATC | 2 cut(s) | 45, 85 |
| NlaIII | CATG | 3 cut(s) | 511, 619, 639 |
| NmuCI | GTSAC | 3 cut(s) | 135, 361, 528 |
| NsbI | TGCGCA | 1 cut(s) | 19 |
| PceI | AGGCCT | 1 cut(s) | 585 |
| PctI | GAATGC | 2 cut(s) | 383, 519 |
| PfeI | GAWTC | 2 cut(s) | 233, 280 |
| PkrI | GCNGC | 3 cut(s) | 163, 379, 382 |
| Ple19I | CGATCG | 1 cut(s) | 48 |
| PshBI | ATTAAT | 2 cut(s) | 144, 756 |
| Psp6I | CCWGG | 3 cut(s) | 36, 394, 769 |
| PspGI | CCWGG | 3 cut(s) | 36, 394, 769 |
| PspPI | GGNCC | 1 cut(s) | 767 |
| PstI | CTGCAG | 1 cut(s) | 382 |
| PvuI | CGATCG | 1 cut(s) | 48 |
| RsaI | GTAC | 3 cut(s) | 216, 340, 427 |
| RsaNI | GTAC | 3 cut(s) | 215, 339, 426 |
| RseI | CAYNNNNRTG | 4 cut(s) | 368, 572, 617, 722 |
| SaqAI | TTAA | 4 cut(s) | 144, 195, 434, 756 |
| SatI | GCNGC | 3 cut(s) | 162, 378, 381 |
| Sau3AI | GATC | 2 cut(s) | 45, 85 |
| Sau96I | GGNCC | 1 cut(s) | 767 |
| ScrFI | CCNGG | 3 cut(s) | 38, 396, 771 |
| SduI | GDGCHC | 2 cut(s) | 355, 450 |
| SfaNI | GCATC | 3 cut(s) | 40, 460, 714 |
| SfcI | CTRYAG | 1 cut(s) | 378 |
| SinI | GGWCC | 1 cut(s) | 767 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 368, 572, 617, 722 |
| SmlI | CTYRAG | 1 cut(s) | 653 |
| SmoI | CTYRAG | 1 cut(s) | 653 |
| Sse9I | AATT | 6 cut(s) | 89, 100, 141, 290, 728, 796 |
| SseBI | AGGCCT | 1 cut(s) | 585 |
| SsiI | CCGC | 1 cut(s) | 305 |
| SspI | AATATT | 1 cut(s) | 777 |
| StuI | AGGCCT | 1 cut(s) | 585 |
| StyD4I | CCNGG | 3 cut(s) | 36, 394, 769 |
| TaaI | ACNGT | 2 cut(s) | 115, 343 |
| TaiI | ACGT | 2 cut(s) | 530, 535 |
| TaqI | TCGA | 3 cut(s) | 44, 48, 668 |
| TasI | AATT | 6 cut(s) | 89, 100, 141, 290, 728, 796 |
| TatI | WGTACW | 2 cut(s) | 214, 338 |
| TfiI | GAWTC | 2 cut(s) | 233, 280 |
| Tru1I | TTAA | 4 cut(s) | 144, 195, 434, 756 |
| Tru9I | TTAA | 4 cut(s) | 144, 195, 434, 756 |
| TscAI | CASTG | 1 cut(s) | 703 |
| TseFI | GTSAC | 3 cut(s) | 135, 361, 528 |
| TseI | GCWGC | 3 cut(s) | 161, 377, 380 |
| Tsp45I | GTSAC | 3 cut(s) | 135, 361, 528 |
| TspDTI | ATGAA | 7 cut(s) | 72, 332, 376, 423, 624, 706, 742 |
| TspGWI | ACGGA | 1 cut(s) | 290 |
| TspRI | CASTG | 1 cut(s) | 703 |
| VpaK11BI | GGWCC | 1 cut(s) | 767 |
| VspI | ATTAAT | 2 cut(s) | 144, 756 |
| XapI | RAATTY | 1 cut(s) | 796 |