protein ubiquitination
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Ank_2 | PF12796 | 66 - 138 | 8.3e-07 | Ankyrin repeats (3 copies) |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 2 cut(s) | 329, 344 |
| AciI | CCGC | 2 cut(s) | 106, 322 |
| AclWI | GGATC | 2 cut(s) | 424, 437 |
| AfaI | GTAC | 4 cut(s) | 8, 545, 604, 632 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 545, 653 |
| AgsI | TTSAA | 3 cut(s) | 179, 407, 666 |
| AluBI | AGCT | 3 cut(s) | 77, 233, 289 |
| AluI | AGCT | 3 cut(s) | 77, 233, 289 |
| Alw26I | GTCTC | 1 cut(s) | 170 |
| AlwI | GGATC | 2 cut(s) | 424, 437 |
| ApeKI | GCWGC | 3 cut(s) | 74, 245, 286 |
| AseI | ATTAAT | 2 cut(s) | 18, 672 |
| AspS9I | GGNCC | 1 cut(s) | 548 |
| AsuHPI | GGTGA | 2 cut(s) | 152, 575 |
| AvaII | GGWCC | 1 cut(s) | 548 |
| BaeGI | GKGCMC | 1 cut(s) | 349 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 594, 622, 627, 655 |
| BamHI | GGATCC | 1 cut(s) | 429 |
| BanI | GGYRCC | 2 cut(s) | 329, 344 |
| BbsI | GAAGAC | 1 cut(s) | 572 |
| BbvI | GCAGC | 3 cut(s) | 86, 257, 298 |
| BccI | CCATC | 1 cut(s) | 382 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 71, 105 |
| BcoDI | GTCTC | 1 cut(s) | 170 |
| BfmI | CTRYAG | 1 cut(s) | 415 |
| BisI | GCNGC | 3 cut(s) | 75, 246, 287 |
| BlsI | GCNGC | 3 cut(s) | 76, 247, 288 |
| Bme18I | GGWCC | 1 cut(s) | 548 |
| BmgT120I | GGNCC | 1 cut(s) | 548 |
| BmiI | GGNNCC | 4 cut(s) | 331, 346, 431, 550 |
| BmsI | GCATC | 2 cut(s) | 175, 257 |
| BpiI | GAAGAC | 1 cut(s) | 572 |
| BpuEI | CTTGAG | 1 cut(s) | 17 |
| BsaAI | YACGTR | 2 cut(s) | 241, 606 |
| BsaJI | CCNNGG | 1 cut(s) | 553 |
| BsaWI | WCCGGW | 1 cut(s) | 298 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 545, 653 |
| Bse1I | ACTGG | 1 cut(s) | 458 |
| BseDI | CCNNGG | 1 cut(s) | 553 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 545, 653 |
| BseNI | ACTGG | 1 cut(s) | 458 |
| BseSI | GKGCMC | 1 cut(s) | 349 |
| BseXI | GCAGC | 3 cut(s) | 86, 257, 298 |
| BsgI | GTGCAG | 1 cut(s) | 305 |
| Bsh1285I | CGRYCG | 1 cut(s) | 384 |
| BshNI | GGYRCC | 2 cut(s) | 329, 344 |
| BsiEI | CGRYCG | 1 cut(s) | 384 |
| BsiSI | CCGG | 1 cut(s) | 299 |
| BsiWI | CGTACG | 1 cut(s) | 6 |
| BslFI | GGGAC | 2 cut(s) | 186, 534 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 545, 653 |
| BsmAI | GTCTC | 1 cut(s) | 170 |
| BsmFI | GGGAC | 2 cut(s) | 186, 534 |
| Bsp1286I | GDGCHC | 1 cut(s) | 349 |
| Bsp143I | GATC | 2 cut(s) | 381, 429 |
| Bsp19I | CCATGG | 1 cut(s) | 553 |
| BspACI | CCGC | 2 cut(s) | 106, 322 |
| BspLI | GGNNCC | 4 cut(s) | 331, 346, 431, 550 |
| BspPI | GGATC | 2 cut(s) | 424, 437 |
| BspQI | GCTCTTC | 1 cut(s) | 240 |
| BspT107I | GGYRCC | 2 cut(s) | 329, 344 |
| BsrI | ACTGG | 1 cut(s) | 458 |
| BssECI | CCNNGG | 1 cut(s) | 553 |
| BssMI | GATC | 2 cut(s) | 381, 429 |
| BssT1I | CCWWGG | 1 cut(s) | 553 |
| Bst4CI | ACNGT | 4 cut(s) | 543, 548, 587, 648 |
| Bst6I | CTCTTC | 1 cut(s) | 240 |
| BstBAI | YACGTR | 2 cut(s) | 241, 606 |
| BstC8I | GCNNGC | 2 cut(s) | 13, 79 |
| BstDSI | CCRYGG | 1 cut(s) | 553 |
| BstKTI | GATC | 2 cut(s) | 384, 432 |
| BstMAI | GTCTC | 1 cut(s) | 170 |
| BstMBI | GATC | 2 cut(s) | 381, 429 |
| BstMCI | CGRYCG | 1 cut(s) | 384 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 71, 194, 203 |
| BstNSI | RCATGY | 3 cut(s) | 15, 263, 639 |
| BstSFI | CTRYAG | 1 cut(s) | 415 |
| BstSLI | GKGCMC | 1 cut(s) | 349 |
| BstSNI | TACGTA | 1 cut(s) | 606 |
| BstV1I | GCAGC | 3 cut(s) | 86, 257, 298 |
| BstV2I | GAAGAC | 1 cut(s) | 572 |
| BstX2I | RGATCY | 1 cut(s) | 429 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 340, 560 |
| BstYI | RGATCY | 1 cut(s) | 429 |
| BtgI | CCRYGG | 1 cut(s) | 553 |
| Cac8I | GCNNGC | 2 cut(s) | 13, 79 |
| Cfr13I | GGNCC | 1 cut(s) | 548 |
| Csp6I | GTAC | 4 cut(s) | 7, 544, 603, 631 |
| CviAII | CATG | 6 cut(s) | 12, 133, 260, 400, 554, 636 |
| CviJI | RGCY | 8 cut(s) | 77, 213, 233, 289, 470, 558, 657, 690 |
| CviKI_1 | RGCY | 8 cut(s) | 77, 213, 233, 289, 470, 558, 657, 690 |
| CviQI | GTAC | 4 cut(s) | 7, 544, 603, 631 |
| DpnI | GATC | 2 cut(s) | 383, 431 |
| DpnII | GATC | 2 cut(s) | 381, 429 |
| Eam1104I | CTCTTC | 1 cut(s) | 240 |
| EarI | CTCTTC | 1 cut(s) | 240 |
| Eco105I | TACGTA | 1 cut(s) | 606 |
| Eco130I | CCWWGG | 1 cut(s) | 553 |
| Eco32I | GATATC | 1 cut(s) | 503 |
| Eco47I | GGWCC | 1 cut(s) | 548 |
| EcoRV | GATATC | 1 cut(s) | 503 |
| EcoT14I | CCWWGG | 1 cut(s) | 553 |
| EcoT22I | ATGCAT | 1 cut(s) | 17 |
| ErhI | CCWWGG | 1 cut(s) | 553 |
| FaeI | CATG | 6 cut(s) | 15, 136, 263, 403, 557, 639 |
| FaqI | GGGAC | 2 cut(s) | 186, 534 |
| FatI | CATG | 6 cut(s) | 11, 132, 259, 399, 553, 635 |
| Fnu4HI | GCNGC | 3 cut(s) | 75, 246, 287 |
| Fsp4HI | GCNGC | 3 cut(s) | 75, 246, 287 |
| GluI | GCNGC | 3 cut(s) | 75, 246, 287 |
| HapII | CCGG | 1 cut(s) | 299 |
| Hin1II | CATG | 6 cut(s) | 15, 136, 263, 403, 557, 639 |
| HinfI | GANTC | 2 cut(s) | 179, 454 |
| HpaII | CCGG | 1 cut(s) | 299 |
| HphI | GGTGA | 2 cut(s) | 152, 575 |
| Hpy188I | TCNGA | 4 cut(s) | 27, 184, 591, 619 |
| Hpy188III | TCNNGA | 1 cut(s) | 385 |
| Hpy99I | CGWCG | 1 cut(s) | 652 |
| HpyAV | CCTTC | 1 cut(s) | 365 |
| HpyCH4III | ACNGT | 4 cut(s) | 543, 548, 587, 648 |
| HpyCH4IV | ACGT | 5 cut(s) | 5, 129, 240, 359, 605 |
| HpyCH4V | TGCA | 6 cut(s) | 15, 65, 155, 265, 286, 363 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 71, 194, 203 |
| HpySE526I | ACGT | 5 cut(s) | 5, 129, 240, 359, 605 |
| Hsp92II | CATG | 6 cut(s) | 15, 136, 263, 403, 557, 639 |
| Kzo9I | GATC | 2 cut(s) | 381, 429 |
| LguI | GCTCTTC | 1 cut(s) | 240 |
| LmnI | GCTCC | 2 cut(s) | 118, 480 |
| LpnPI | CCDG | 4 cut(s) | 63, 312, 471, 546 |
| Lsp1109I | GCAGC | 3 cut(s) | 86, 257, 298 |
| LweI | GCATC | 2 cut(s) | 175, 257 |
| MaeII | ACGT | 5 cut(s) | 5, 129, 240, 359, 605 |
| MaeIII | GTNAC | 1 cut(s) | 514 |
| MalI | GATC | 2 cut(s) | 383, 431 |
| MboI | GATC | 2 cut(s) | 381, 429 |
| MboII | GAAGA | 4 cut(s) | 112, 227, 314, 572 |
| MflI | RGATCY | 1 cut(s) | 429 |
| MhlI | GDGCHC | 1 cut(s) | 349 |
| MluCI | AATT | 3 cut(s) | 49, 278, 491 |
| MnlI | CCTC | 2 cut(s) | 460, 520 |
| Mph1103I | ATGCAT | 1 cut(s) | 17 |
| MseI | TTAA | 6 cut(s) | 18, 200, 533, 641, 672, 678 |
| MspA1I | CMGCKG | 1 cut(s) | 77 |
| MspI | CCGG | 1 cut(s) | 299 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 71, 194, 203 |
| NcoI | CCATGG | 1 cut(s) | 553 |
| NdeII | GATC | 2 cut(s) | 381, 429 |
| NlaIII | CATG | 6 cut(s) | 15, 136, 263, 403, 557, 639 |
| NlaIV | GGNNCC | 4 cut(s) | 331, 346, 431, 550 |
| NmuCI | GTSAC | 1 cut(s) | 514 |
| NsiI | ATGCAT | 1 cut(s) | 17 |
| NspI | RCATGY | 3 cut(s) | 15, 263, 639 |
| PaeI | GCATGC | 1 cut(s) | 15 |
| PciSI | GCTCTTC | 1 cut(s) | 240 |
| PfeI | GAWTC | 2 cut(s) | 179, 454 |
| Pfl23II | CGTACG | 1 cut(s) | 6 |
| PkrI | GCNGC | 3 cut(s) | 76, 247, 288 |
| Ple19I | CGATCG | 1 cut(s) | 384 |
| Ppu21I | YACGTR | 2 cut(s) | 241, 606 |
| PshBI | ATTAAT | 2 cut(s) | 18, 672 |
| PspLI | CGTACG | 1 cut(s) | 6 |
| PspN4I | GGNNCC | 4 cut(s) | 331, 346, 431, 550 |
| PspPI | GGNCC | 1 cut(s) | 548 |
| PsuI | RGATCY | 1 cut(s) | 429 |
| PvuI | CGATCG | 1 cut(s) | 384 |
| PvuII | CAGCTG | 1 cut(s) | 77 |
| RsaI | GTAC | 4 cut(s) | 8, 545, 604, 632 |
| RsaNI | GTAC | 4 cut(s) | 7, 544, 603, 631 |
| SapI | GCTCTTC | 1 cut(s) | 240 |
| SaqAI | TTAA | 6 cut(s) | 18, 200, 533, 641, 672, 678 |
| SatI | GCNGC | 3 cut(s) | 75, 246, 287 |
| Sau3AI | GATC | 2 cut(s) | 381, 429 |
| Sau96I | GGNCC | 1 cut(s) | 548 |
| SduI | GDGCHC | 1 cut(s) | 349 |
| SfaNI | GCATC | 2 cut(s) | 175, 257 |
| SfcI | CTRYAG | 1 cut(s) | 415 |
| SinI | GGWCC | 1 cut(s) | 548 |
| SmlI | CTYRAG | 1 cut(s) | 32 |
| SmoI | CTYRAG | 1 cut(s) | 32 |
| SnaBI | TACGTA | 1 cut(s) | 606 |
| SphI | GCATGC | 1 cut(s) | 15 |
| Sse9I | AATT | 3 cut(s) | 49, 278, 491 |
| SsiI | CCGC | 2 cut(s) | 106, 322 |
| SspI | AATATT | 2 cut(s) | 670, 676 |
| StyI | CCWWGG | 1 cut(s) | 553 |
| TaaI | ACNGT | 4 cut(s) | 543, 548, 587, 648 |
| TaiI | ACGT | 5 cut(s) | 8, 132, 243, 362, 608 |
| TaqI | TCGA | 4 cut(s) | 123, 251, 384, 499 |
| TasI | AATT | 3 cut(s) | 49, 278, 491 |
| TfiI | GAWTC | 2 cut(s) | 179, 454 |
| Tru1I | TTAA | 6 cut(s) | 18, 200, 533, 641, 672, 678 |
| Tru9I | TTAA | 6 cut(s) | 18, 200, 533, 641, 672, 678 |
| TseFI | GTSAC | 1 cut(s) | 514 |
| TseI | GCWGC | 3 cut(s) | 74, 245, 286 |
| Tsp45I | GTSAC | 1 cut(s) | 514 |
| TspGWI | ACGGA | 1 cut(s) | 105 |
| VpaK11BI | GGWCC | 1 cut(s) | 548 |
| VspI | ATTAAT | 2 cut(s) | 18, 672 |
| XceI | RCATGY | 3 cut(s) | 15, 263, 639 |
| Zsp2I | ATGCAT | 1 cut(s) | 17 |