protein ubiquitination
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 632 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 149, 848 |
| AciI | CCGC | 1 cut(s) | 971 |
| AclWI | GGATC | 3 cut(s) | 490, 727, 740 |
| AcoI | YGGCCR | 2 cut(s) | 886, 942 |
| AcsI | RAATTY | 1 cut(s) | 1077 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 149, 658, 848, 940 |
| AgsI | TTSAA | 6 cut(s) | 25, 292, 556, 710, 926, 1063 |
| AjnI | CCWGG | 1 cut(s) | 911 |
| AleI | CACNNNNGTG | 1 cut(s) | 630 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 272, 304 |
| AluBI | AGCT | 7 cut(s) | 75, 155, 295, 380, 536, 592, 833 |
| AluI | AGCT | 7 cut(s) | 75, 155, 295, 380, 536, 592, 833 |
| Alw21I | GWGCWC | 1 cut(s) | 77 |
| Alw26I | GTCTC | 3 cut(s) | 305, 322, 473 |
| AlwI | GGATC | 3 cut(s) | 490, 727, 740 |
| Ama87I | CYCGRG | 1 cut(s) | 78 |
| AoxI | GGCC | 4 cut(s) | 366, 886, 931, 942 |
| ApeKI | GCWGC | 2 cut(s) | 548, 589 |
| ApoI | RAATTY | 1 cut(s) | 1077 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 287 |
| AspLEI | GCGC | 1 cut(s) | 863 |
| AspS9I | GGNCC | 3 cut(s) | 367, 851, 932 |
| AsuHPI | GGTGA | 3 cut(s) | 133, 455, 1037 |
| AvaI | CYCGRG | 1 cut(s) | 78 |
| AvaII | GGWCC | 1 cut(s) | 851 |
| BalI | TGGCCA | 1 cut(s) | 944 |
| BamHI | GGATCC | 1 cut(s) | 732 |
| BanI | GGYRCC | 1 cut(s) | 632 |
| BanII | GRGCYC | 1 cut(s) | 77 |
| BbsI | GAAGAC | 2 cut(s) | 72, 111 |
| Bbv12I | GWGCWC | 1 cut(s) | 77 |
| BbvI | GCAGC | 2 cut(s) | 560, 601 |
| BccI | CCATC | 1 cut(s) | 685 |
| BceAI | ACGGC | 1 cut(s) | 873 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 662, 696 |
| BciT130I | CCWGG | 1 cut(s) | 913 |
| BclI | TGATCA | 1 cut(s) | 373 |
| BcoDI | GTCTC | 3 cut(s) | 305, 322, 473 |
| BfaI | CTAG | 1 cut(s) | 864 |
| BfoI | RGCGCY | 1 cut(s) | 864 |
| BisI | GCNGC | 2 cut(s) | 549, 590 |
| BlsI | GCNGC | 2 cut(s) | 550, 591 |
| Bme1390I | CCNGG | 1 cut(s) | 913 |
| Bme18I | GGWCC | 1 cut(s) | 851 |
| BmeT110I | CYCGRG | 1 cut(s) | 78 |
| BmgT120I | GGNCC | 3 cut(s) | 367, 851, 932 |
| BmiI | GGNNCC | 3 cut(s) | 634, 734, 853 |
| BmrFI | CCNGG | 1 cut(s) | 913 |
| BmsI | GCATC | 3 cut(s) | 346, 478, 670 |
| BpiI | GAAGAC | 2 cut(s) | 72, 111 |
| BpmI | CTGGAG | 2 cut(s) | 91, 171 |
| BpuEI | CTTGAG | 1 cut(s) | 287 |
| Bsa29I | ATCGAT | 1 cut(s) | 354 |
| BsaAI | YACGTR | 2 cut(s) | 433, 544 |
| BsaJI | CCNNGG | 4 cut(s) | 186, 258, 856, 912 |
| BsaWI | WCCGGW | 1 cut(s) | 601 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 272, 302 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 149, 658, 848, 940 |
| Bse1I | ACTGG | 1 cut(s) | 74 |
| BseBI | CCWGG | 1 cut(s) | 913 |
| BseCI | ATCGAT | 1 cut(s) | 354 |
| BseDI | CCNNGG | 4 cut(s) | 186, 258, 856, 912 |
| BseGI | GGATG | 3 cut(s) | 121, 133, 177 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 149, 658, 848, 940 |
| BseMII | CTCAG | 1 cut(s) | 213 |
| BseNI | ACTGG | 1 cut(s) | 74 |
| BseXI | GCAGC | 2 cut(s) | 560, 601 |
| BseYI | CCCAGC | 1 cut(s) | 359 |
| BsgI | GTGCAG | 1 cut(s) | 608 |
| Bsh1285I | CGRYCG | 1 cut(s) | 687 |
| BshFI | GGCC | 4 cut(s) | 368, 888, 933, 944 |
| BshNI | GGYRCC | 1 cut(s) | 632 |
| BshVI | ATCGAT | 1 cut(s) | 354 |
| BsiEI | CGRYCG | 1 cut(s) | 687 |
| BsiHKAI | GWGCWC | 1 cut(s) | 77 |
| BsiHKCI | CYCGRG | 1 cut(s) | 78 |
| BsiSI | CCGG | 1 cut(s) | 602 |
| BslFI | GGGAC | 4 cut(s) | 232, 489, 837, 929 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 149, 658, 848, 940 |
| BsmAI | GTCTC | 3 cut(s) | 305, 322, 473 |
| BsmBI | CGTCTC | 1 cut(s) | 305 |
| BsmFI | GGGAC | 4 cut(s) | 232, 489, 837, 929 |
| BsnI | GGCC | 4 cut(s) | 368, 888, 933, 944 |
| BsoBI | CYCGRG | 1 cut(s) | 78 |
| Bsp1286I | GDGCHC | 1 cut(s) | 77 |
| Bsp143I | GATC | 5 cut(s) | 373, 406, 482, 684, 732 |
| Bsp19I | CCATGG | 2 cut(s) | 258, 856 |
| BspACI | CCGC | 1 cut(s) | 971 |
| BspANI | GGCC | 4 cut(s) | 368, 888, 933, 944 |
| BspCNI | CTCAG | 1 cut(s) | 214 |
| BspDI | ATCGAT | 1 cut(s) | 354 |
| BspHI | TCATGA | 1 cut(s) | 1111 |
| BspLI | GGNNCC | 3 cut(s) | 634, 734, 853 |
| BspPI | GGATC | 3 cut(s) | 490, 727, 740 |
| BspQI | GCTCTTC | 1 cut(s) | 543 |
| BspT107I | GGYRCC | 1 cut(s) | 632 |
| BsrI | ACTGG | 1 cut(s) | 74 |
| BssECI | CCNNGG | 4 cut(s) | 186, 258, 856, 912 |
| BssMI | GATC | 5 cut(s) | 373, 406, 482, 684, 732 |
| BssT1I | CCWWGG | 3 cut(s) | 186, 258, 856 |
| Bst2UI | CCWGG | 1 cut(s) | 913 |
| Bst4CI | ACNGT | 3 cut(s) | 16, 420, 1104 |
| Bst6I | CTCTTC | 1 cut(s) | 543 |
| BstBAI | YACGTR | 2 cut(s) | 433, 544 |
| BstC8I | GCNNGC | 3 cut(s) | 366, 382, 1016 |
| BstDEI | CTNAG | 1 cut(s) | 222 |
| BstDSI | CCRYGG | 2 cut(s) | 258, 856 |
| BstF5I | GGATG | 3 cut(s) | 121, 133, 177 |
| BstH2I | RGCGCY | 1 cut(s) | 864 |
| BstHHI | GCGC | 1 cut(s) | 863 |
| BstKTI | GATC | 5 cut(s) | 376, 409, 485, 687, 735 |
| BstMAI | GTCTC | 3 cut(s) | 305, 322, 473 |
| BstMBI | GATC | 5 cut(s) | 373, 406, 482, 684, 732 |
| BstMCI | CGRYCG | 1 cut(s) | 687 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 197, 263, 365 |
| BstNI | CCWGG | 1 cut(s) | 913 |
| BstNSI | RCATGY | 1 cut(s) | 200 |
| BstSCI | CCNGG | 1 cut(s) | 911 |
| BstV1I | GCAGC | 2 cut(s) | 560, 601 |
| BstV2I | GAAGAC | 2 cut(s) | 72, 111 |
| BstX2I | RGATCY | 1 cut(s) | 732 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 643 |
| BstYI | RGATCY | 1 cut(s) | 732 |
| Bsu15I | ATCGAT | 1 cut(s) | 354 |
| BsuRI | GGCC | 4 cut(s) | 368, 888, 933, 944 |
| BsuTUI | ATCGAT | 1 cut(s) | 354 |
| BtgI | CCRYGG | 2 cut(s) | 258, 856 |
| BtsCI | GGATG | 3 cut(s) | 121, 133, 177 |
| Cac8I | GCNNGC | 3 cut(s) | 366, 382, 1016 |
| CciI | TCATGA | 1 cut(s) | 1111 |
| CfoI | GCGC | 1 cut(s) | 863 |
| Cfr13I | GGNCC | 3 cut(s) | 367, 851, 932 |
| ClaI | ATCGAT | 1 cut(s) | 354 |
| CviAII | CATG | 8 cut(s) | 197, 259, 267, 440, 703, 857, 958, 1112 |
| DdeI | CTNAG | 1 cut(s) | 222 |
| DpnI | GATC | 5 cut(s) | 375, 408, 484, 686, 734 |
| DpnII | GATC | 5 cut(s) | 373, 406, 482, 684, 732 |
| EaeI | YGGCCR | 2 cut(s) | 886, 942 |
| Eam1104I | CTCTTC | 1 cut(s) | 543 |
| EarI | CTCTTC | 1 cut(s) | 543 |
| Ecl136II | GAGCTC | 1 cut(s) | 75 |
| Eco130I | CCWWGG | 3 cut(s) | 186, 258, 856 |
| Eco24I | GRGCYC | 1 cut(s) | 77 |
| Eco32I | GATATC | 1 cut(s) | 806 |
| Eco47I | GGWCC | 1 cut(s) | 851 |
| Eco53kI | GAGCTC | 1 cut(s) | 75 |
| Eco88I | CYCGRG | 1 cut(s) | 78 |
| EcoICRI | GAGCTC | 1 cut(s) | 75 |
| EcoRII | CCWGG | 1 cut(s) | 911 |
| EcoRV | GATATC | 1 cut(s) | 806 |
| EcoT14I | CCWWGG | 3 cut(s) | 186, 258, 856 |
| EcoT38I | GRGCYC | 1 cut(s) | 77 |
| ErhI | CCWWGG | 3 cut(s) | 186, 258, 856 |
| Esp3I | CGTCTC | 1 cut(s) | 305 |
| FaeI | CATG | 8 cut(s) | 200, 262, 270, 443, 706, 860, 961, 1115 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 77, 109 |
| FaqI | GGGAC | 4 cut(s) | 232, 489, 837, 929 |
| FatI | CATG | 8 cut(s) | 196, 258, 266, 439, 702, 856, 957, 1111 |
| FauI | CCCGC | 1 cut(s) | 964 |
| FauNDI | CATATG | 1 cut(s) | 1050 |
| FbaI | TGATCA | 1 cut(s) | 373 |
| Fnu4HI | GCNGC | 2 cut(s) | 549, 590 |
| FokI | GGATG | 3 cut(s) | 120, 128, 184 |
| FriOI | GRGCYC | 1 cut(s) | 77 |
| Fsp4HI | GCNGC | 2 cut(s) | 549, 590 |
| FspBI | CTAG | 1 cut(s) | 864 |
| GlaI | GCGC | 1 cut(s) | 862 |
| GluI | GCNGC | 2 cut(s) | 549, 590 |
| GsaI | CCCAGC | 1 cut(s) | 363 |
| GsuI | CTGGAG | 2 cut(s) | 91, 171 |
| HaeII | RGCGCY | 1 cut(s) | 864 |
| HaeIII | GGCC | 4 cut(s) | 368, 888, 933, 944 |
| HapII | CCGG | 1 cut(s) | 602 |
| HhaI | GCGC | 1 cut(s) | 863 |
| Hin1II | CATG | 8 cut(s) | 200, 262, 270, 443, 706, 860, 961, 1115 |
| Hin6I | GCGC | 1 cut(s) | 861 |
| HinP1I | GCGC | 1 cut(s) | 861 |
| HincII | GTYRAC | 1 cut(s) | 963 |
| HindII | GTYRAC | 1 cut(s) | 963 |
| HinfI | GANTC | 2 cut(s) | 436, 1005 |
| HpaI | GTTAAC | 1 cut(s) | 963 |
| HpaII | CCGG | 1 cut(s) | 602 |
| HphI | GGTGA | 3 cut(s) | 133, 455, 1037 |
| Hpy166II | GTNNAC | 2 cut(s) | 416, 963 |
| Hpy188I | TCNGA | 3 cut(s) | 310, 487, 894 |
| Hpy188III | TCNNGA | 4 cut(s) | 38, 85, 688, 1112 |
| Hpy8I | GTNNAC | 2 cut(s) | 416, 963 |
| HpyAV | CCTTC | 2 cut(s) | 31, 668 |
| HpyCH4III | ACNGT | 3 cut(s) | 16, 420, 1104 |
| HpyCH4IV | ACGT | 3 cut(s) | 298, 432, 543 |
| HpyCH4V | TGCA | 7 cut(s) | 29, 458, 568, 589, 656, 666, 986 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 197, 263, 365 |
| HpyF3I | CTNAG | 1 cut(s) | 222 |
| HpySE526I | ACGT | 3 cut(s) | 298, 432, 543 |
| Hsp92II | CATG | 8 cut(s) | 200, 262, 270, 443, 706, 860, 961, 1115 |
| HspAI | GCGC | 1 cut(s) | 861 |
| Ksp22I | TGATCA | 1 cut(s) | 373 |
| KspAI | GTTAAC | 1 cut(s) | 963 |
| Kzo9I | GATC | 5 cut(s) | 373, 406, 482, 684, 732 |
| LguI | GCTCTTC | 1 cut(s) | 543 |
| LmnI | GCTCC | 3 cut(s) | 72, 152, 783 |
| Lsp1109I | GCAGC | 2 cut(s) | 560, 601 |
| LweI | GCATC | 3 cut(s) | 346, 478, 670 |
| MaeI | CTAG | 1 cut(s) | 864 |
| MaeII | ACGT | 3 cut(s) | 298, 432, 543 |
| MaeIII | GTNAC | 5 cut(s) | 16, 739, 752, 817, 1104 |
| MalI | GATC | 5 cut(s) | 375, 408, 484, 686, 734 |
| MboI | GATC | 5 cut(s) | 373, 406, 482, 684, 732 |
| MboII | GAAGA | 7 cut(s) | 77, 116, 187, 329, 415, 530, 617 |
| MfeI | CAATTG | 1 cut(s) | 30 |
| MflI | RGATCY | 1 cut(s) | 732 |
| MhlI | GDGCHC | 1 cut(s) | 77 |
| MlsI | TGGCCA | 1 cut(s) | 944 |
| MluCI | AATT | 6 cut(s) | 30, 581, 794, 993, 1077, 1123 |
| MluNI | TGGCCA | 1 cut(s) | 944 |
| MlyI | GAGTC | 1 cut(s) | 999 |
| MmeI | TCCRAC | 2 cut(s) | 848, 882 |
| MnlI | CCTC | 4 cut(s) | 265, 763, 941, 1080 |
| Mox20I | TGGCCA | 1 cut(s) | 944 |
| MroXI | GAANNNNTTC | 1 cut(s) | 287 |
| MscI | TGGCCA | 1 cut(s) | 944 |
| MseI | TTAA | 6 cut(s) | 48, 204, 503, 962, 992, 1126 |
| MslI | CAYNNNNRTG | 3 cut(s) | 257, 630, 1053 |
| Msp20I | TGGCCA | 1 cut(s) | 944 |
| MspI | CCGG | 1 cut(s) | 602 |
| MspR9I | CCNGG | 1 cut(s) | 913 |
| MunI | CAATTG | 1 cut(s) | 30 |
| MvaI | CCWGG | 1 cut(s) | 913 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 197, 263, 365 |
| NcoI | CCATGG | 2 cut(s) | 258, 856 |
| NdeI | CATATG | 1 cut(s) | 1050 |
| NdeII | GATC | 5 cut(s) | 373, 406, 482, 684, 732 |
| NlaIII | CATG | 8 cut(s) | 200, 262, 270, 443, 706, 860, 961, 1115 |
| NlaIV | GGNNCC | 3 cut(s) | 634, 734, 853 |
| NmuCI | GTSAC | 2 cut(s) | 817, 1104 |
| NspI | RCATGY | 1 cut(s) | 200 |
| OliI | CACNNNNGTG | 1 cut(s) | 630 |
| PagI | TCATGA | 1 cut(s) | 1111 |
| PciSI | GCTCTTC | 1 cut(s) | 543 |
| PdmI | GAANNNNTTC | 1 cut(s) | 287 |
| PfeI | GAWTC | 1 cut(s) | 436 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 149, 848 |
| PkrI | GCNGC | 2 cut(s) | 550, 591 |
| Ple19I | CGATCG | 1 cut(s) | 687 |
| PleI | GAGTC | 1 cut(s) | 999 |
| PpsI | GAGTC | 1 cut(s) | 999 |
| Ppu21I | YACGTR | 2 cut(s) | 433, 544 |
| Psp124BI | GAGCTC | 1 cut(s) | 77 |
| Psp6I | CCWGG | 1 cut(s) | 911 |
| PspFI | CCCAGC | 1 cut(s) | 359 |
| PspGI | CCWGG | 1 cut(s) | 911 |
| PspN4I | GGNNCC | 3 cut(s) | 634, 734, 853 |
| PspPI | GGNCC | 3 cut(s) | 367, 851, 932 |
| PsuI | RGATCY | 1 cut(s) | 732 |
| PvuI | CGATCG | 1 cut(s) | 687 |
| RseI | CAYNNNNRTG | 3 cut(s) | 257, 630, 1053 |
| SacI | GAGCTC | 1 cut(s) | 77 |
| SapI | GCTCTTC | 1 cut(s) | 543 |
| SaqAI | TTAA | 6 cut(s) | 48, 204, 503, 962, 992, 1126 |
| SatI | GCNGC | 2 cut(s) | 549, 590 |
| Sau3AI | GATC | 5 cut(s) | 373, 406, 482, 684, 732 |
| Sau96I | GGNCC | 3 cut(s) | 367, 851, 932 |
| SchI | GAGTC | 1 cut(s) | 999 |
| ScrFI | CCNGG | 1 cut(s) | 913 |
| SduI | GDGCHC | 1 cut(s) | 77 |
| SfaNI | GCATC | 3 cut(s) | 346, 478, 670 |
| SinI | GGWCC | 1 cut(s) | 851 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 257, 630, 1053 |
| SmlI | CTYRAG | 1 cut(s) | 302 |
| SmoI | CTYRAG | 1 cut(s) | 302 |
| Sse9I | AATT | 6 cut(s) | 30, 581, 794, 993, 1077, 1123 |
| SsiI | CCGC | 1 cut(s) | 971 |
| SspMI | CTAG | 1 cut(s) | 864 |
| SstI | GAGCTC | 1 cut(s) | 77 |
| StyD4I | CCNGG | 1 cut(s) | 911 |
| StyI | CCWWGG | 3 cut(s) | 186, 258, 856 |
| TaaI | ACNGT | 3 cut(s) | 16, 420, 1104 |
| TaiI | ACGT | 3 cut(s) | 301, 435, 546 |
| TaqI | TCGA | 5 cut(s) | 354, 426, 672, 687, 802 |
| TasI | AATT | 6 cut(s) | 30, 581, 794, 993, 1077, 1123 |
| TfiI | GAWTC | 1 cut(s) | 436 |
| Tru1I | TTAA | 6 cut(s) | 48, 204, 503, 962, 992, 1126 |
| Tru9I | TTAA | 6 cut(s) | 48, 204, 503, 962, 992, 1126 |
| TseFI | GTSAC | 2 cut(s) | 817, 1104 |
| TseI | GCWGC | 2 cut(s) | 548, 589 |
| Tsp45I | GTSAC | 2 cut(s) | 817, 1104 |
| TspDTI | ATGAA | 3 cut(s) | 78, 188, 1128 |
| TspGWI | ACGGA | 1 cut(s) | 230 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 149, 848 |
| VpaK11BI | GGWCC | 1 cut(s) | 851 |
| XapI | RAATTY | 1 cut(s) | 1077 |
| XceI | RCATGY | 1 cut(s) | 200 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 964 |
| XmnI | GAANNNNTTC | 1 cut(s) | 287 |
| XspI | CTAG | 1 cut(s) | 864 |