protein ubiquitination
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| PGG | PF13962 | 115 - 224 | 4e-23 | Domain of unknown function |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 66 |
| AccBSI | CCGCTC | 1 cut(s) | 157 |
| AccII | CGCG | 1 cut(s) | 740 |
| AciI | CCGC | 3 cut(s) | 49, 85, 155 |
| AcsI | RAATTY | 2 cut(s) | 103, 691 |
| AcuI | CTGAAG | 1 cut(s) | 255 |
| AcvI | CACGTG | 1 cut(s) | 287 |
| AfaI | GTAC | 3 cut(s) | 115, 240, 364 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 721 |
| AflIII | ACRYGT | 2 cut(s) | 440, 581 |
| AgsI | TTSAA | 4 cut(s) | 44, 169, 248, 824 |
| AjnI | CCWGG | 2 cut(s) | 418, 799 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 89, 121 |
| AluBI | AGCT | 1 cut(s) | 208 |
| AluI | AGCT | 1 cut(s) | 208 |
| Alw21I | GWGCWC | 2 cut(s) | 294, 379 |
| ApeKI | GCWGC | 1 cut(s) | 208 |
| ApoI | RAATTY | 2 cut(s) | 103, 691 |
| AseI | ATTAAT | 1 cut(s) | 317 |
| AspS9I | GGNCC | 1 cut(s) | 797 |
| AsuHPI | GGTGA | 2 cut(s) | 403, 692 |
| AvaII | GGWCC | 1 cut(s) | 797 |
| BauI | CACGAG | 1 cut(s) | 308 |
| BbrPI | CACGTG | 1 cut(s) | 287 |
| BbsI | GAAGAC | 2 cut(s) | 339, 437 |
| Bbv12I | GWGCWC | 2 cut(s) | 294, 379 |
| BbvI | GCAGC | 1 cut(s) | 195 |
| BccI | CCATC | 3 cut(s) | 82, 398, 715 |
| BceAI | ACGGC | 1 cut(s) | 297 |
| BciT130I | CCWGG | 2 cut(s) | 420, 801 |
| BciVI | GTATCC | 1 cut(s) | 520 |
| BfmI | CTRYAG | 1 cut(s) | 402 |
| BfuI | GTATCC | 1 cut(s) | 520 |
| BisI | GCNGC | 3 cut(s) | 49, 155, 209 |
| BlsI | GCNGC | 3 cut(s) | 50, 156, 210 |
| Bme1390I | CCNGG | 2 cut(s) | 420, 801 |
| Bme18I | GGWCC | 1 cut(s) | 797 |
| BmgT120I | GGNCC | 1 cut(s) | 797 |
| BmrFI | CCNGG | 2 cut(s) | 420, 801 |
| BmsI | GCATC | 2 cut(s) | 316, 744 |
| BpiI | GAAGAC | 2 cut(s) | 339, 437 |
| BsaAI | YACGTR | 1 cut(s) | 287 |
| BsaBI | GATNNNNATC | 1 cut(s) | 482 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 721 |
| Bse1I | ACTGG | 1 cut(s) | 242 |
| Bse3DI | GCAATG | 2 cut(s) | 218, 783 |
| Bse8I | GATNNNNATC | 1 cut(s) | 482 |
| BseBI | CCWGG | 2 cut(s) | 420, 801 |
| BseGI | GGATG | 6 cut(s) | 13, 93, 116, 331, 705, 759 |
| BseJI | GATNNNNATC | 1 cut(s) | 482 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 721 |
| BseMI | GCAATG | 2 cut(s) | 218, 783 |
| BseMII | CTCAG | 1 cut(s) | 537 |
| BseNI | ACTGG | 1 cut(s) | 242 |
| BseRI | GAGGAG | 1 cut(s) | 536 |
| BseXI | GCAGC | 1 cut(s) | 195 |
| BsgI | GTGCAG | 1 cut(s) | 645 |
| Bsh1236I | CGCG | 1 cut(s) | 740 |
| Bsh1285I | CGRYCG | 1 cut(s) | 738 |
| BsiEI | CGRYCG | 1 cut(s) | 738 |
| BsiHKAI | GWGCWC | 2 cut(s) | 294, 379 |
| BslFI | GGGAC | 1 cut(s) | 555 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 721 |
| BsmFI | GGGAC | 1 cut(s) | 555 |
| BsmI | GAATGC | 2 cut(s) | 50, 407 |
| Bsp1286I | GDGCHC | 2 cut(s) | 294, 379 |
| Bsp1407I | TGTACA | 1 cut(s) | 362 |
| Bsp143I | GATC | 2 cut(s) | 645, 735 |
| BspACI | CCGC | 3 cut(s) | 49, 85, 155 |
| BspCNI | CTCAG | 1 cut(s) | 536 |
| BspFNI | CGCG | 1 cut(s) | 740 |
| BsrBI | CCGCTC | 1 cut(s) | 157 |
| BsrDI | GCAATG | 2 cut(s) | 218, 783 |
| BsrGI | TGTACA | 1 cut(s) | 362 |
| BsrI | ACTGG | 1 cut(s) | 242 |
| BssMI | GATC | 2 cut(s) | 645, 735 |
| BssSI | CACGAG | 1 cut(s) | 308 |
| Bst2BI | CACGAG | 1 cut(s) | 308 |
| Bst2UI | CCWGG | 2 cut(s) | 420, 801 |
| Bst4CI | ACNGT | 2 cut(s) | 367, 415 |
| BstAUI | TGTACA | 1 cut(s) | 362 |
| BstBAI | YACGTR | 1 cut(s) | 287 |
| BstDEI | CTNAG | 2 cut(s) | 523, 696 |
| BstF5I | GGATG | 6 cut(s) | 13, 93, 116, 331, 705, 759 |
| BstFNI | CGCG | 1 cut(s) | 740 |
| BstKTI | GATC | 2 cut(s) | 648, 738 |
| BstMBI | GATC | 2 cut(s) | 645, 735 |
| BstMCI | CGRYCG | 1 cut(s) | 738 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 205 |
| BstNI | CCWGG | 2 cut(s) | 420, 801 |
| BstNSI | RCATGY | 2 cut(s) | 444, 585 |
| BstSCI | CCNGG | 2 cut(s) | 418, 799 |
| BstSFI | CTRYAG | 1 cut(s) | 402 |
| BstUI | CGCG | 1 cut(s) | 740 |
| BstV1I | GCAGC | 1 cut(s) | 195 |
| BstV2I | GAAGAC | 2 cut(s) | 339, 437 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 457 |
| BsuI | GTATCC | 1 cut(s) | 520 |
| BtsCI | GGATG | 6 cut(s) | 13, 93, 116, 331, 705, 759 |
| BtsIMutI | CAGTG | 1 cut(s) | 531 |
| Cfr13I | GGNCC | 1 cut(s) | 797 |
| CseI | GACGC | 1 cut(s) | 729 |
| Csp6I | GTAC | 3 cut(s) | 114, 239, 363 |
| CviAII | CATG | 6 cut(s) | 32, 254, 394, 441, 457, 582 |
| CviJI | RGCY | 3 cut(s) | 126, 208, 725 |
| CviKI_1 | RGCY | 3 cut(s) | 126, 208, 725 |
| CviQI | GTAC | 3 cut(s) | 114, 239, 363 |
| DdeI | CTNAG | 2 cut(s) | 523, 696 |
| DpnI | GATC | 2 cut(s) | 647, 737 |
| DpnII | GATC | 2 cut(s) | 645, 735 |
| Eco47I | GGWCC | 1 cut(s) | 797 |
| Eco57I | CTGAAG | 1 cut(s) | 255 |
| Eco72I | CACGTG | 1 cut(s) | 287 |
| EcoRII | CCWGG | 2 cut(s) | 418, 799 |
| EcoT22I | ATGCAT | 1 cut(s) | 255 |
| FaeI | CATG | 6 cut(s) | 35, 257, 397, 444, 460, 585 |
| FaqI | GGGAC | 1 cut(s) | 555 |
| FatI | CATG | 6 cut(s) | 31, 253, 393, 440, 456, 581 |
| FauNDI | CATATG | 2 cut(s) | 147, 749 |
| Fnu4HI | GCNGC | 3 cut(s) | 49, 155, 209 |
| FokI | GGATG | 6 cut(s) | 20, 100, 123, 338, 692, 766 |
| Fsp4HI | GCNGC | 3 cut(s) | 49, 155, 209 |
| GluI | GCNGC | 3 cut(s) | 49, 155, 209 |
| HgaI | GACGC | 1 cut(s) | 729 |
| Hin1II | CATG | 6 cut(s) | 35, 257, 397, 444, 460, 585 |
| HinfI | GANTC | 3 cut(s) | 257, 335, 543 |
| HphI | GGTGA | 2 cut(s) | 403, 692 |
| Hpy188I | TCNGA | 4 cut(s) | 274, 493, 710, 735 |
| Hpy188III | TCNNGA | 2 cut(s) | 308, 628 |
| HpyAV | CCTTC | 1 cut(s) | 316 |
| HpyCH4III | ACNGT | 2 cut(s) | 367, 415 |
| HpyCH4IV | ACGT | 2 cut(s) | 286, 556 |
| HpyCH4V | TGCA | 9 cut(s) | 185, 193, 199, 211, 253, 329, 563, 662, 757 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 205 |
| HpyF3I | CTNAG | 2 cut(s) | 523, 696 |
| HpySE526I | ACGT | 2 cut(s) | 286, 556 |
| Hsp92II | CATG | 6 cut(s) | 35, 257, 397, 444, 460, 585 |
| Kzo9I | GATC | 2 cut(s) | 645, 735 |
| LmnI | GCTCC | 2 cut(s) | 147, 162 |
| LpnPI | CCDG | 6 cut(s) | 255, 405, 432, 786, 813, 814 |
| Lsp1109I | GCAGC | 1 cut(s) | 195 |
| LweI | GCATC | 2 cut(s) | 316, 744 |
| MaeII | ACGT | 2 cut(s) | 286, 556 |
| MaeIII | GTNAC | 3 cut(s) | 277, 385, 434 |
| MalI | GATC | 2 cut(s) | 647, 737 |
| MbiI | CCGCTC | 1 cut(s) | 157 |
| MboI | GATC | 2 cut(s) | 645, 735 |
| MboII | GAAGA | 7 cut(s) | 30, 344, 437, 578, 722, 826, 829 |
| MhlI | GDGCHC | 2 cut(s) | 294, 379 |
| MluCI | AATT | 6 cut(s) | 103, 164, 314, 339, 691, 758 |
| MlyI | GAGTC | 2 cut(s) | 329, 537 |
| MnlI | CCTC | 6 cut(s) | 217, 523, 532, 557, 587, 635 |
| Mph1103I | ATGCAT | 1 cut(s) | 255 |
| MseI | TTAA | 6 cut(s) | 177, 219, 317, 342, 474, 810 |
| MslI | CAYNNNNRTG | 4 cut(s) | 455, 596, 748, 752 |
| MspR9I | CCNGG | 2 cut(s) | 420, 801 |
| Mva1269I | GAATGC | 2 cut(s) | 50, 407 |
| MvaI | CCWGG | 2 cut(s) | 420, 801 |
| MvnI | CGCG | 1 cut(s) | 740 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 205 |
| NdeI | CATATG | 2 cut(s) | 147, 749 |
| NdeII | GATC | 2 cut(s) | 645, 735 |
| NlaIII | CATG | 6 cut(s) | 35, 257, 397, 444, 460, 585 |
| NmuCI | GTSAC | 1 cut(s) | 277 |
| NsiI | ATGCAT | 1 cut(s) | 255 |
| NspI | RCATGY | 2 cut(s) | 444, 585 |
| PciI | ACATGT | 2 cut(s) | 440, 581 |
| PctI | GAATGC | 2 cut(s) | 50, 407 |
| PfeI | GAWTC | 1 cut(s) | 257 |
| PkrI | GCNGC | 3 cut(s) | 50, 156, 210 |
| Ple19I | CGATCG | 1 cut(s) | 738 |
| PleI | GAGTC | 2 cut(s) | 329, 537 |
| PmaCI | CACGTG | 1 cut(s) | 287 |
| PmlI | CACGTG | 1 cut(s) | 287 |
| PpsI | GAGTC | 2 cut(s) | 329, 537 |
| Ppu21I | YACGTR | 1 cut(s) | 287 |
| PscI | ACATGT | 2 cut(s) | 440, 581 |
| PshBI | ATTAAT | 1 cut(s) | 317 |
| PsiI | TTATAA | 1 cut(s) | 66 |
| Psp6I | CCWGG | 2 cut(s) | 418, 799 |
| PspCI | CACGTG | 1 cut(s) | 287 |
| PspGI | CCWGG | 2 cut(s) | 418, 799 |
| PspPI | GGNCC | 1 cut(s) | 797 |
| PvuI | CGATCG | 1 cut(s) | 738 |
| RsaI | GTAC | 3 cut(s) | 115, 240, 364 |
| RsaNI | GTAC | 3 cut(s) | 114, 239, 363 |
| RseI | CAYNNNNRTG | 4 cut(s) | 455, 596, 748, 752 |
| SaqAI | TTAA | 6 cut(s) | 177, 219, 317, 342, 474, 810 |
| SatI | GCNGC | 3 cut(s) | 49, 155, 209 |
| Sau3AI | GATC | 2 cut(s) | 645, 735 |
| Sau96I | GGNCC | 1 cut(s) | 797 |
| SchI | GAGTC | 2 cut(s) | 329, 537 |
| ScrFI | CCNGG | 2 cut(s) | 420, 801 |
| SduI | GDGCHC | 2 cut(s) | 294, 379 |
| SetI | ASST | 9 cut(s) | 72, 184, 210, 228, 289, 524, 559, 682, 717 |
| SfaNI | GCATC | 2 cut(s) | 316, 744 |
| SfcI | CTRYAG | 1 cut(s) | 402 |
| SinI | GGWCC | 1 cut(s) | 797 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 455, 596, 748, 752 |
| Sse9I | AATT | 6 cut(s) | 103, 164, 314, 339, 691, 758 |
| SsiI | CCGC | 3 cut(s) | 49, 85, 155 |
| SspI | AATATT | 1 cut(s) | 807 |
| StyD4I | CCNGG | 2 cut(s) | 418, 799 |
| TaaI | ACNGT | 2 cut(s) | 367, 415 |
| TaiI | ACGT | 2 cut(s) | 289, 559 |
| TaqI | TCGA | 1 cut(s) | 629 |
| TasI | AATT | 6 cut(s) | 103, 164, 314, 339, 691, 758 |
| TatI | WGTACW | 2 cut(s) | 113, 362 |
| TauI | GCSGC | 2 cut(s) | 51, 157 |
| TfiI | GAWTC | 1 cut(s) | 257 |
| Tru1I | TTAA | 6 cut(s) | 177, 219, 317, 342, 474, 810 |
| Tru9I | TTAA | 6 cut(s) | 177, 219, 317, 342, 474, 810 |
| TscAI | CASTG | 1 cut(s) | 531 |
| TseFI | GTSAC | 1 cut(s) | 277 |
| TseI | GCWGC | 1 cut(s) | 208 |
| Tsp45I | GTSAC | 1 cut(s) | 277 |
| TspDTI | ATGAA | 9 cut(s) | 17, 20, 270, 335, 445, 472, 694, 736, 772 |
| TspGWI | ACGGA | 1 cut(s) | 702 |
| TspRI | CASTG | 1 cut(s) | 531 |
| VpaK11BI | GGWCC | 1 cut(s) | 797 |
| VspI | ATTAAT | 1 cut(s) | 317 |
| XapI | RAATTY | 2 cut(s) | 103, 691 |
| XceI | RCATGY | 2 cut(s) | 444, 585 |
| Zsp2I | ATGCAT | 1 cut(s) | 255 |