Pfam:UBN2_3
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 2 cut(s) | 638, 653 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 854 |
| AciI | CCGC | 1 cut(s) | 219 |
| AclWI | GGATC | 3 cut(s) | 496, 733, 746 |
| AcoI | YGGCCR | 1 cut(s) | 948 |
| AcsI | RAATTY | 1 cut(s) | 762 |
| AcuI | CTGAAG | 1 cut(s) | 174 |
| AcyI | GRCGYC | 1 cut(s) | 895 |
| AfaI | GTAC | 1 cut(s) | 1045 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 87, 663, 854, 946 |
| AgsI | TTSAA | 5 cut(s) | 295, 562, 716, 932, 1076 |
| AjnI | CCWGG | 1 cut(s) | 305 |
| AleI | CACNNNNGTG | 1 cut(s) | 636 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 275, 307 |
| AluBI | AGCT | 4 cut(s) | 386, 542, 598, 839 |
| AluI | AGCT | 4 cut(s) | 386, 542, 598, 839 |
| Alw26I | GTCTC | 3 cut(s) | 325, 479, 1074 |
| AlwI | GGATC | 3 cut(s) | 496, 733, 746 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 152 |
| Ama87I | CYCGRG | 1 cut(s) | 81 |
| AoxI | GGCC | 2 cut(s) | 372, 948 |
| ApeKI | GCWGC | 3 cut(s) | 362, 554, 595 |
| ApoI | RAATTY | 1 cut(s) | 762 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 290 |
| AspLEI | GCGC | 1 cut(s) | 869 |
| AspS9I | GGNCC | 2 cut(s) | 373, 857 |
| AsuC2I | CCSGG | 2 cut(s) | 82, 83 |
| AsuHPI | GGTGA | 2 cut(s) | 97, 461 |
| AvaI | CYCGRG | 1 cut(s) | 81 |
| AvaII | GGWCC | 1 cut(s) | 857 |
| BaeGI | GKGCMC | 1 cut(s) | 658 |
| BalI | TGGCCA | 1 cut(s) | 950 |
| BamHI | GGATCC | 1 cut(s) | 738 |
| BanI | GGYRCC | 2 cut(s) | 638, 653 |
| BbvI | GCAGC | 3 cut(s) | 349, 566, 607 |
| BccI | CCATC | 1 cut(s) | 691 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 380, 414, 668, 702 |
| BciT130I | CCWGG | 1 cut(s) | 307 |
| BclI | TGATCA | 1 cut(s) | 379 |
| BcnI | CCSGG | 2 cut(s) | 82, 83 |
| BcoDI | GTCTC | 3 cut(s) | 325, 479, 1074 |
| BfoI | RGCGCY | 1 cut(s) | 870 |
| BisI | GCNGC | 3 cut(s) | 363, 555, 596 |
| BlsI | GCNGC | 3 cut(s) | 364, 556, 597 |
| Bme1390I | CCNGG | 3 cut(s) | 82, 83, 307 |
| Bme18I | GGWCC | 1 cut(s) | 857 |
| BmeT110I | CYCGRG | 1 cut(s) | 81 |
| BmgT120I | GGNCC | 2 cut(s) | 373, 857 |
| BmiI | GGNNCC | 4 cut(s) | 640, 655, 740, 859 |
| BmrFI | CCNGG | 3 cut(s) | 82, 83, 307 |
| BmsI | GCATC | 5 cut(s) | 139, 145, 349, 484, 676 |
| BpmI | CTGGAG | 1 cut(s) | 94 |
| BpuMI | CCSGG | 2 cut(s) | 82, 83 |
| Bsa29I | ATCGAT | 1 cut(s) | 357 |
| BsaAI | YACGTR | 1 cut(s) | 439 |
| BsaHI | GRCGYC | 1 cut(s) | 895 |
| BsaJI | CCNNGG | 6 cut(s) | 81, 189, 261, 305, 862, 945 |
| BsaWI | WCCGGW | 1 cut(s) | 607 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 275, 305 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 87, 663, 854, 946 |
| Bse1I | ACTGG | 2 cut(s) | 77, 767 |
| BseBI | CCWGG | 1 cut(s) | 307 |
| BseCI | ATCGAT | 1 cut(s) | 357 |
| BseDI | CCNNGG | 6 cut(s) | 81, 189, 261, 305, 862, 945 |
| BseGI | GGATG | 3 cut(s) | 124, 136, 180 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 87, 663, 854, 946 |
| BseMII | CTCAG | 1 cut(s) | 216 |
| BseNI | ACTGG | 2 cut(s) | 77, 767 |
| BseSI | GKGCMC | 1 cut(s) | 658 |
| BseXI | GCAGC | 3 cut(s) | 349, 566, 607 |
| BseYI | CCCAGC | 1 cut(s) | 365 |
| BsgI | GTGCAG | 1 cut(s) | 614 |
| Bsh1285I | CGRYCG | 1 cut(s) | 693 |
| BshFI | GGCC | 2 cut(s) | 374, 950 |
| BshNI | GGYRCC | 2 cut(s) | 638, 653 |
| BshVI | ATCGAT | 1 cut(s) | 357 |
| BsiEI | CGRYCG | 1 cut(s) | 693 |
| BsiHKCI | CYCGRG | 1 cut(s) | 81 |
| BsiSI | CCGG | 2 cut(s) | 82, 608 |
| BslFI | GGGAC | 2 cut(s) | 235, 843 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 87, 663, 854, 946 |
| BsmAI | GTCTC | 3 cut(s) | 325, 479, 1074 |
| BsmFI | GGGAC | 2 cut(s) | 235, 843 |
| BsmI | GAATGC | 1 cut(s) | 190 |
| BsnI | GGCC | 2 cut(s) | 374, 950 |
| BsoBI | CYCGRG | 1 cut(s) | 81 |
| Bsp1286I | GDGCHC | 1 cut(s) | 658 |
| Bsp143I | GATC | 5 cut(s) | 379, 412, 488, 690, 738 |
| Bsp19I | CCATGG | 2 cut(s) | 261, 862 |
| BspACI | CCGC | 1 cut(s) | 219 |
| BspANI | GGCC | 2 cut(s) | 374, 950 |
| BspCNI | CTCAG | 1 cut(s) | 217 |
| BspDI | ATCGAT | 1 cut(s) | 357 |
| BspLI | GGNNCC | 4 cut(s) | 640, 655, 740, 859 |
| BspPI | GGATC | 3 cut(s) | 496, 733, 746 |
| BspQI | GCTCTTC | 1 cut(s) | 549 |
| BspT107I | GGYRCC | 2 cut(s) | 638, 653 |
| BsrI | ACTGG | 2 cut(s) | 77, 767 |
| BssECI | CCNNGG | 6 cut(s) | 81, 189, 261, 305, 862, 945 |
| BssMI | GATC | 5 cut(s) | 379, 412, 488, 690, 738 |
| BssNI | GRCGYC | 1 cut(s) | 895 |
| BssT1I | CCWWGG | 3 cut(s) | 261, 862, 945 |
| Bst2UI | CCWGG | 1 cut(s) | 307 |
| Bst4CI | ACNGT | 3 cut(s) | 19, 426, 1043 |
| Bst6I | CTCTTC | 2 cut(s) | 549, 1077 |
| BstACI | GRCGYC | 1 cut(s) | 895 |
| BstBAI | YACGTR | 1 cut(s) | 439 |
| BstC8I | GCNNGC | 3 cut(s) | 372, 388, 1022 |
| BstDEI | CTNAG | 2 cut(s) | 225, 478 |
| BstDSI | CCRYGG | 2 cut(s) | 261, 862 |
| BstF5I | GGATG | 3 cut(s) | 124, 136, 180 |
| BstH2I | RGCGCY | 1 cut(s) | 870 |
| BstHHI | GCGC | 1 cut(s) | 869 |
| BstKTI | GATC | 5 cut(s) | 382, 415, 491, 693, 741 |
| BstMAI | GTCTC | 3 cut(s) | 325, 479, 1074 |
| BstMBI | GATC | 5 cut(s) | 379, 412, 488, 690, 738 |
| BstMCI | CGRYCG | 1 cut(s) | 693 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 200, 266, 371, 503, 512 |
| BstNI | CCWGG | 1 cut(s) | 307 |
| BstNSI | RCATGY | 1 cut(s) | 203 |
| BstSCI | CCNGG | 3 cut(s) | 80, 81, 305 |
| BstSLI | GKGCMC | 1 cut(s) | 658 |
| BstV1I | GCAGC | 3 cut(s) | 349, 566, 607 |
| BstX2I | RGATCY | 1 cut(s) | 738 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 649 |
| BstYI | RGATCY | 1 cut(s) | 738 |
| Bsu15I | ATCGAT | 1 cut(s) | 357 |
| BsuRI | GGCC | 2 cut(s) | 374, 950 |
| BsuTUI | ATCGAT | 1 cut(s) | 357 |
| BtgI | CCRYGG | 2 cut(s) | 261, 862 |
| BtsCI | GGATG | 3 cut(s) | 124, 136, 180 |
| BtsI | GCAGTG | 1 cut(s) | 674 |
| BtsIMutI | CAGTG | 3 cut(s) | 15, 70, 674 |
| Cac8I | GCNNGC | 3 cut(s) | 372, 388, 1022 |
| CaiI | CAGNNNCTG | 1 cut(s) | 152 |
| CfoI | GCGC | 1 cut(s) | 869 |
| Cfr13I | GGNCC | 2 cut(s) | 373, 857 |
| Cfr9I | CCCGGG | 1 cut(s) | 81 |
| ClaI | ATCGAT | 1 cut(s) | 357 |
| CseI | GACGC | 1 cut(s) | 884 |
| Csp6I | GTAC | 1 cut(s) | 1044 |
| CviAII | CATG | 7 cut(s) | 200, 262, 270, 446, 863, 918, 964 |
| CviQI | GTAC | 1 cut(s) | 1044 |
| DdeI | CTNAG | 2 cut(s) | 225, 478 |
| DpnI | GATC | 5 cut(s) | 381, 414, 490, 692, 740 |
| DpnII | GATC | 5 cut(s) | 379, 412, 488, 690, 738 |
| EaeI | YGGCCR | 1 cut(s) | 948 |
| Eam1104I | CTCTTC | 2 cut(s) | 549, 1077 |
| EarI | CTCTTC | 2 cut(s) | 549, 1077 |
| Eco130I | CCWWGG | 3 cut(s) | 261, 862, 945 |
| Eco32I | GATATC | 1 cut(s) | 812 |
| Eco47I | GGWCC | 1 cut(s) | 857 |
| Eco57I | CTGAAG | 1 cut(s) | 174 |
| Eco88I | CYCGRG | 1 cut(s) | 81 |
| EcoRII | CCWGG | 1 cut(s) | 305 |
| EcoRV | GATATC | 1 cut(s) | 812 |
| EcoT14I | CCWWGG | 3 cut(s) | 261, 862, 945 |
| ErhI | CCWWGG | 3 cut(s) | 261, 862, 945 |
| FaeI | CATG | 7 cut(s) | 203, 265, 273, 449, 866, 921, 967 |
| FaqI | GGGAC | 2 cut(s) | 235, 843 |
| FatI | CATG | 7 cut(s) | 199, 261, 269, 445, 862, 917, 963 |
| FauI | CCCGC | 1 cut(s) | 212 |
| FbaI | TGATCA | 1 cut(s) | 379 |
| Fnu4HI | GCNGC | 3 cut(s) | 363, 555, 596 |
| FokI | GGATG | 3 cut(s) | 123, 131, 187 |
| Fsp4HI | GCNGC | 3 cut(s) | 363, 555, 596 |
| GlaI | GCGC | 1 cut(s) | 868 |
| GluI | GCNGC | 3 cut(s) | 363, 555, 596 |
| GsaI | CCCAGC | 1 cut(s) | 369 |
| GsuI | CTGGAG | 1 cut(s) | 94 |
| HaeII | RGCGCY | 1 cut(s) | 870 |
| HaeIII | GGCC | 2 cut(s) | 374, 950 |
| HapII | CCGG | 2 cut(s) | 82, 608 |
| HgaI | GACGC | 1 cut(s) | 884 |
| HhaI | GCGC | 1 cut(s) | 869 |
| Hin1I | GRCGYC | 1 cut(s) | 895 |
| Hin1II | CATG | 7 cut(s) | 203, 265, 273, 449, 866, 921, 967 |
| Hin6I | GCGC | 1 cut(s) | 867 |
| HinP1I | GCGC | 1 cut(s) | 867 |
| HincII | GTYRAC | 1 cut(s) | 969 |
| HindII | GTYRAC | 1 cut(s) | 969 |
| HinfI | GANTC | 3 cut(s) | 442, 959, 1011 |
| HpaI | GTTAAC | 1 cut(s) | 969 |
| HpaII | CCGG | 2 cut(s) | 82, 608 |
| HphI | GGTGA | 2 cut(s) | 97, 461 |
| Hpy166II | GTNNAC | 1 cut(s) | 969 |
| Hpy188I | TCNGA | 3 cut(s) | 313, 493, 900 |
| Hpy188III | TCNNGA | 2 cut(s) | 41, 694 |
| Hpy8I | GTNNAC | 1 cut(s) | 969 |
| Hpy99I | CGWCG | 1 cut(s) | 341 |
| HpyAV | CCTTC | 1 cut(s) | 460 |
| HpyCH4III | ACNGT | 3 cut(s) | 19, 426, 1043 |
| HpyCH4IV | ACGT | 2 cut(s) | 438, 1046 |
| HpyCH4V | TGCA | 7 cut(s) | 32, 574, 595, 662, 672, 917, 992 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 200, 266, 371, 503, 512 |
| HpyF3I | CTNAG | 2 cut(s) | 225, 478 |
| HpySE526I | ACGT | 2 cut(s) | 438, 1046 |
| Hsp92I | GRCGYC | 1 cut(s) | 895 |
| Hsp92II | CATG | 7 cut(s) | 203, 265, 273, 449, 866, 921, 967 |
| HspAI | GCGC | 1 cut(s) | 867 |
| Ksp22I | TGATCA | 1 cut(s) | 379 |
| KspAI | GTTAAC | 1 cut(s) | 969 |
| Kzo9I | GATC | 5 cut(s) | 379, 412, 488, 690, 738 |
| LguI | GCTCTTC | 1 cut(s) | 549 |
| LmnI | GCTCC | 1 cut(s) | 789 |
| Lsp1109I | GCAGC | 3 cut(s) | 349, 566, 607 |
| LweI | GCATC | 5 cut(s) | 139, 145, 349, 484, 676 |
| MaeII | ACGT | 2 cut(s) | 438, 1046 |
| MaeIII | GTNAC | 4 cut(s) | 19, 745, 823, 1047 |
| MalI | GATC | 5 cut(s) | 381, 414, 490, 692, 740 |
| MboI | GATC | 5 cut(s) | 379, 412, 488, 690, 738 |
| MboII | GAAGA | 7 cut(s) | 190, 193, 332, 421, 536, 623, 1064 |
| MfeI | CAATTG | 1 cut(s) | 33 |
| MflI | RGATCY | 1 cut(s) | 738 |
| MhlI | GDGCHC | 1 cut(s) | 658 |
| MlsI | TGGCCA | 1 cut(s) | 950 |
| MluCI | AATT | 5 cut(s) | 33, 296, 587, 762, 800 |
| MluNI | TGGCCA | 1 cut(s) | 950 |
| MlyI | GAGTC | 1 cut(s) | 1005 |
| MmeI | TCCRAC | 2 cut(s) | 854, 888 |
| MnlI | CCTC | 4 cut(s) | 81, 184, 312, 769 |
| Mox20I | TGGCCA | 1 cut(s) | 950 |
| MroXI | GAANNNNTTC | 1 cut(s) | 290 |
| MscI | TGGCCA | 1 cut(s) | 950 |
| MseI | TTAA | 5 cut(s) | 51, 207, 509, 968, 998 |
| MslI | CAYNNNNRTG | 2 cut(s) | 260, 636 |
| Msp20I | TGGCCA | 1 cut(s) | 950 |
| MspI | CCGG | 2 cut(s) | 82, 608 |
| MspR9I | CCNGG | 3 cut(s) | 82, 83, 307 |
| MunI | CAATTG | 1 cut(s) | 33 |
| Mva1269I | GAATGC | 1 cut(s) | 190 |
| MvaI | CCWGG | 1 cut(s) | 307 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 200, 266, 371, 503, 512 |
| NciI | CCSGG | 2 cut(s) | 82, 83 |
| NcoI | CCATGG | 2 cut(s) | 261, 862 |
| NdeII | GATC | 5 cut(s) | 379, 412, 488, 690, 738 |
| NlaIII | CATG | 7 cut(s) | 203, 265, 273, 449, 866, 921, 967 |
| NlaIV | GGNNCC | 4 cut(s) | 640, 655, 740, 859 |
| NmeAIII | GCCGAG | 1 cut(s) | 214 |
| NmuCI | GTSAC | 1 cut(s) | 823 |
| NspI | RCATGY | 1 cut(s) | 203 |
| OliI | CACNNNNGTG | 1 cut(s) | 636 |
| PciSI | GCTCTTC | 1 cut(s) | 549 |
| PctI | GAATGC | 1 cut(s) | 190 |
| PdmI | GAANNNNTTC | 1 cut(s) | 290 |
| PfeI | GAWTC | 2 cut(s) | 442, 959 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 854 |
| PkrI | GCNGC | 3 cut(s) | 364, 556, 597 |
| Ple19I | CGATCG | 1 cut(s) | 693 |
| PleI | GAGTC | 1 cut(s) | 1005 |
| PpsI | GAGTC | 1 cut(s) | 1005 |
| Ppu21I | YACGTR | 1 cut(s) | 439 |
| Psp6I | CCWGG | 1 cut(s) | 305 |
| PspFI | CCCAGC | 1 cut(s) | 365 |
| PspGI | CCWGG | 1 cut(s) | 305 |
| PspN4I | GGNNCC | 4 cut(s) | 640, 655, 740, 859 |
| PspPI | GGNCC | 2 cut(s) | 373, 857 |
| PstNI | CAGNNNCTG | 1 cut(s) | 152 |
| PsuI | RGATCY | 1 cut(s) | 738 |
| PvuI | CGATCG | 1 cut(s) | 693 |
| RsaI | GTAC | 1 cut(s) | 1045 |
| RsaNI | GTAC | 1 cut(s) | 1044 |
| RseI | CAYNNNNRTG | 2 cut(s) | 260, 636 |
| SapI | GCTCTTC | 1 cut(s) | 549 |
| SaqAI | TTAA | 5 cut(s) | 51, 207, 509, 968, 998 |
| SatI | GCNGC | 3 cut(s) | 363, 555, 596 |
| Sau3AI | GATC | 5 cut(s) | 379, 412, 488, 690, 738 |
| Sau96I | GGNCC | 2 cut(s) | 373, 857 |
| SchI | GAGTC | 1 cut(s) | 1005 |
| ScrFI | CCNGG | 3 cut(s) | 82, 83, 307 |
| SduI | GDGCHC | 1 cut(s) | 658 |
| SfaNI | GCATC | 5 cut(s) | 139, 145, 349, 484, 676 |
| SinI | GGWCC | 1 cut(s) | 857 |
| SmaI | CCCGGG | 1 cut(s) | 83 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 260, 636 |
| Sse9I | AATT | 5 cut(s) | 33, 296, 587, 762, 800 |
| SsiI | CCGC | 1 cut(s) | 219 |
| StyD4I | CCNGG | 3 cut(s) | 80, 81, 305 |
| StyI | CCWWGG | 3 cut(s) | 261, 862, 945 |
| TaaI | ACNGT | 3 cut(s) | 19, 426, 1043 |
| TaiI | ACGT | 2 cut(s) | 441, 1049 |
| TaqI | TCGA | 5 cut(s) | 357, 432, 678, 693, 808 |
| TasI | AATT | 5 cut(s) | 33, 296, 587, 762, 800 |
| TfiI | GAWTC | 2 cut(s) | 442, 959 |
| Tru1I | TTAA | 5 cut(s) | 51, 207, 509, 968, 998 |
| Tru9I | TTAA | 5 cut(s) | 51, 207, 509, 968, 998 |
| TscAI | CASTG | 3 cut(s) | 22, 77, 674 |
| TseFI | GTSAC | 1 cut(s) | 823 |
| TseI | GCWGC | 3 cut(s) | 362, 554, 595 |
| Tsp45I | GTSAC | 1 cut(s) | 823 |
| TspDTI | ATGAA | 1 cut(s) | 191 |
| TspMI | CCCGGG | 1 cut(s) | 81 |
| TspRI | CASTG | 3 cut(s) | 22, 77, 674 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 854 |
| VpaK11BI | GGWCC | 1 cut(s) | 857 |
| XapI | RAATTY | 1 cut(s) | 762 |
| XceI | RCATGY | 1 cut(s) | 203 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 970 |
| XmaI | CCCGGG | 1 cut(s) | 81 |
| XmnI | GAANNNNTTC | 1 cut(s) | 290 |