protein ubiquitination
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 71 |
| AcyI | GRCGYC | 1 cut(s) | 72 |
| AjnI | CCWGG | 2 cut(s) | 16, 221 |
| AluBI | AGCT | 3 cut(s) | 206, 253, 262 |
| AluI | AGCT | 3 cut(s) | 206, 253, 262 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 17 |
| ApeKI | GCWGC | 1 cut(s) | 11 |
| AspLEI | GCGC | 1 cut(s) | 74 |
| AsuHPI | GGTGA | 1 cut(s) | 137 |
| BanI | GGYRCC | 1 cut(s) | 71 |
| BbvI | GCAGC | 1 cut(s) | 23 |
| BccI | CCATC | 3 cut(s) | 80, 168, 220 |
| BciT130I | CCWGG | 2 cut(s) | 18, 223 |
| BfaI | CTAG | 1 cut(s) | 254 |
| BfoI | RGCGCY | 1 cut(s) | 75 |
| BisI | GCNGC | 1 cut(s) | 12 |
| BlsI | GCNGC | 1 cut(s) | 13 |
| Bme1390I | CCNGG | 2 cut(s) | 18, 223 |
| BmiI | GGNNCC | 1 cut(s) | 73 |
| BmrFI | CCNGG | 2 cut(s) | 18, 223 |
| BmsI | GCATC | 1 cut(s) | 157 |
| BsaAI | YACGTR | 1 cut(s) | 235 |
| BsaHI | GRCGYC | 1 cut(s) | 72 |
| BseBI | CCWGG | 2 cut(s) | 18, 223 |
| BseGI | GGATG | 4 cut(s) | 47, 160, 231, 288 |
| BseRI | GAGGAG | 1 cut(s) | 133 |
| BseXI | GCAGC | 1 cut(s) | 23 |
| BshNI | GGYRCC | 1 cut(s) | 71 |
| BspLI | GGNNCC | 1 cut(s) | 73 |
| BspQI | GCTCTTC | 1 cut(s) | 243 |
| BspT107I | GGYRCC | 1 cut(s) | 71 |
| BssNI | GRCGYC | 1 cut(s) | 72 |
| Bst2UI | CCWGG | 2 cut(s) | 18, 223 |
| Bst6I | CTCTTC | 1 cut(s) | 243 |
| BstACI | GRCGYC | 1 cut(s) | 72 |
| BstBAI | YACGTR | 1 cut(s) | 235 |
| BstDEI | CTNAG | 1 cut(s) | 288 |
| BstF5I | GGATG | 4 cut(s) | 47, 160, 231, 288 |
| BstH2I | RGCGCY | 1 cut(s) | 75 |
| BstHHI | GCGC | 1 cut(s) | 74 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 176, 259 |
| BstNI | CCWGG | 2 cut(s) | 18, 223 |
| BstSCI | CCNGG | 2 cut(s) | 16, 221 |
| BstV1I | GCAGC | 1 cut(s) | 23 |
| BtsCI | GGATG | 4 cut(s) | 47, 160, 231, 288 |
| CaiI | CAGNNNCTG | 1 cut(s) | 17 |
| CfoI | GCGC | 1 cut(s) | 74 |
| CviAII | CATG | 1 cut(s) | 59 |
| CviJI | RGCY | 5 cut(s) | 206, 231, 253, 262, 274 |
| CviKI_1 | RGCY | 5 cut(s) | 206, 231, 253, 262, 274 |
| DdeI | CTNAG | 1 cut(s) | 288 |
| DinI | GGCGCC | 1 cut(s) | 73 |
| Eam1104I | CTCTTC | 1 cut(s) | 243 |
| EarI | CTCTTC | 1 cut(s) | 243 |
| EcoRII | CCWGG | 2 cut(s) | 16, 221 |
| EgeI | GGCGCC | 1 cut(s) | 73 |
| EheI | GGCGCC | 1 cut(s) | 73 |
| FaeI | CATG | 1 cut(s) | 62 |
| FaiI | YATR | 5 cut(s) | 60, 81, 96, 114, 152 |
| FatI | CATG | 1 cut(s) | 58 |
| Fnu4HI | GCNGC | 1 cut(s) | 12 |
| FokI | GGATG | 3 cut(s) | 34, 147, 238 |
| Fsp4HI | GCNGC | 1 cut(s) | 12 |
| FspBI | CTAG | 1 cut(s) | 254 |
| GlaI | GCGC | 1 cut(s) | 73 |
| GluI | GCNGC | 1 cut(s) | 12 |
| HaeII | RGCGCY | 1 cut(s) | 75 |
| HhaI | GCGC | 1 cut(s) | 74 |
| Hin1I | GRCGYC | 1 cut(s) | 72 |
| Hin1II | CATG | 1 cut(s) | 62 |
| Hin6I | GCGC | 1 cut(s) | 72 |
| HinP1I | GCGC | 1 cut(s) | 72 |
| HphI | GGTGA | 1 cut(s) | 137 |
| Hpy188III | TCNNGA | 1 cut(s) | 164 |
| HpyCH4IV | ACGT | 2 cut(s) | 36, 234 |
| HpyCH4V | TGCA | 1 cut(s) | 170 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 176, 259 |
| HpyF3I | CTNAG | 1 cut(s) | 288 |
| HpySE526I | ACGT | 2 cut(s) | 36, 234 |
| Hsp92I | GRCGYC | 1 cut(s) | 72 |
| Hsp92II | CATG | 1 cut(s) | 62 |
| HspAI | GCGC | 1 cut(s) | 72 |
| KasI | GGCGCC | 1 cut(s) | 71 |
| LguI | GCTCTTC | 1 cut(s) | 243 |
| LpnPI | CCDG | 6 cut(s) | 3, 30, 180, 184, 208, 235 |
| Lsp1109I | GCAGC | 1 cut(s) | 23 |
| LweI | GCATC | 1 cut(s) | 157 |
| MaeI | CTAG | 1 cut(s) | 254 |
| MaeII | ACGT | 2 cut(s) | 36, 234 |
| MaeIII | GTNAC | 1 cut(s) | 28 |
| MboII | GAAGA | 2 cut(s) | 97, 260 |
| Mly113I | GGCGCC | 1 cut(s) | 72 |
| MnlI | CCTC | 4 cut(s) | 52, 111, 224, 273 |
| MslI | CAYNNNNRTG | 2 cut(s) | 84, 165 |
| MspR9I | CCNGG | 2 cut(s) | 18, 223 |
| MvaI | CCWGG | 2 cut(s) | 18, 223 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 176, 259 |
| NarI | GGCGCC | 1 cut(s) | 72 |
| NlaIII | CATG | 1 cut(s) | 62 |
| NlaIV | GGNNCC | 1 cut(s) | 73 |
| NmuCI | GTSAC | 1 cut(s) | 28 |
| PciSI | GCTCTTC | 1 cut(s) | 243 |
| PkrI | GCNGC | 1 cut(s) | 13 |
| PluTI | GGCGCC | 1 cut(s) | 75 |
| Ppu21I | YACGTR | 1 cut(s) | 235 |
| Psp6I | CCWGG | 2 cut(s) | 16, 221 |
| PspGI | CCWGG | 2 cut(s) | 16, 221 |
| PspN4I | GGNNCC | 1 cut(s) | 73 |
| PstNI | CAGNNNCTG | 1 cut(s) | 17 |
| RseI | CAYNNNNRTG | 2 cut(s) | 84, 165 |
| SapI | GCTCTTC | 1 cut(s) | 243 |
| SatI | GCNGC | 1 cut(s) | 12 |
| ScrFI | CCNGG | 2 cut(s) | 18, 223 |
| SetI | ASST | 6 cut(s) | 19, 39, 208, 237, 255, 264 |
| SfaNI | GCATC | 1 cut(s) | 157 |
| SfoI | GGCGCC | 1 cut(s) | 73 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 84, 165 |
| SspDI | GGCGCC | 1 cut(s) | 71 |
| SspMI | CTAG | 1 cut(s) | 254 |
| StyD4I | CCNGG | 2 cut(s) | 16, 221 |
| TaiI | ACGT | 2 cut(s) | 39, 237 |
| TseFI | GTSAC | 1 cut(s) | 28 |
| TseI | GCWGC | 1 cut(s) | 11 |
| Tsp45I | GTSAC | 1 cut(s) | 28 |
| TspDTI | ATGAA | 1 cut(s) | 139 |
| TspGWI | ACGGA | 1 cut(s) | 98 |
| XspI | CTAG | 1 cut(s) | 254 |