protein ubiquitination
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 1460 |
| AccII | CGCG | 1 cut(s) | 525 |
| AciI | CCGC | 5 cut(s) | 204, 351, 523, 675, 1722 |
| AclWI | GGATC | 1 cut(s) | 101 |
| AcoI | YGGCCR | 2 cut(s) | 348, 520 |
| AcsI | RAATTY | 5 cut(s) | 385, 781, 932, 1348, 1629 |
| AcuI | CTGAAG | 2 cut(s) | 81, 578 |
| AdeI | CACNNNGTG | 1 cut(s) | 253 |
| AfaI | GTAC | 3 cut(s) | 116, 738, 1323 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 65 |
| AflIII | ACRYGT | 1 cut(s) | 733 |
| AgsI | TTSAA | 9 cut(s) | 127, 268, 299, 788, 932, 1121, 1262, 1303, 1746 |
| AjiI | CACGTC | 1 cut(s) | 955 |
| AjnI | CCWGG | 1 cut(s) | 1504 |
| AleI | CACNNNNGTG | 1 cut(s) | 174 |
| AluBI | AGCT | 8 cut(s) | 8, 215, 271, 320, 467, 1019, 1271, 1291 |
| AluI | AGCT | 8 cut(s) | 8, 215, 271, 320, 467, 1019, 1271, 1291 |
| Alw21I | GWGCWC | 2 cut(s) | 181, 535 |
| Alw26I | GTCTC | 1 cut(s) | 60 |
| Alw44I | GTGCAC | 1 cut(s) | 177 |
| AlwI | GGATC | 1 cut(s) | 101 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1505 |
| AoxI | GGCC | 6 cut(s) | 348, 451, 520, 612, 1332, 1693 |
| ApaLI | GTGCAC | 1 cut(s) | 177 |
| ApeKI | GCWGC | 7 cut(s) | 5, 146, 709, 1226, 1268, 1487, 1490 |
| ApoI | RAATTY | 5 cut(s) | 385, 781, 932, 1348, 1629 |
| AspS9I | GGNCC | 2 cut(s) | 451, 613 |
| AsuC2I | CCSGG | 1 cut(s) | 174 |
| AsuHPI | GGTGA | 5 cut(s) | 146, 962, 1375, 1417, 1693 |
| AxyI | CCTNAGG | 1 cut(s) | 1664 |
| BaeGI | GKGCMC | 3 cut(s) | 181, 642, 1465 |
| BanI | GGYRCC | 1 cut(s) | 1460 |
| BanII | GRGCYC | 1 cut(s) | 1161 |
| BauI | CACGAG | 2 cut(s) | 221, 1371 |
| BbsI | GAAGAC | 1 cut(s) | 1659 |
| Bbv12I | GWGCWC | 2 cut(s) | 181, 535 |
| BbvI | GCAGC | 7 cut(s) | 17, 133, 721, 1238, 1280, 1474, 1477 |
| BccI | CCATC | 6 cut(s) | 296, 302, 521, 576, 1544, 1723 |
| BceAI | ACGGC | 4 cut(s) | 37, 535, 956, 1100 |
| BciT130I | CCWGG | 1 cut(s) | 1506 |
| BciVI | GTATCC | 1 cut(s) | 612 |
| BcnI | CCSGG | 1 cut(s) | 174 |
| BcoDI | GTCTC | 1 cut(s) | 60 |
| BfaI | CTAG | 1 cut(s) | 794 |
| BfmI | CTRYAG | 1 cut(s) | 1020 |
| BfuI | GTATCC | 1 cut(s) | 612 |
| BglII | AGATCT | 1 cut(s) | 970 |
| Bme1390I | CCNGG | 2 cut(s) | 174, 1506 |
| BmgBI | CACGTC | 1 cut(s) | 955 |
| BmgT120I | GGNCC | 2 cut(s) | 451, 613 |
| BmiI | GGNNCC | 2 cut(s) | 452, 1462 |
| BmrFI | CCNGG | 2 cut(s) | 174, 1506 |
| BmrI | ACTGGG | 1 cut(s) | 466 |
| BmsI | GCATC | 1 cut(s) | 1824 |
| BmuI | ACTGGG | 1 cut(s) | 466 |
| BpiI | GAAGAC | 1 cut(s) | 1659 |
| BpmI | CTGGAG | 1 cut(s) | 411 |
| BpuEI | CTTGAG | 2 cut(s) | 492, 1784 |
| BpuMI | CCSGG | 1 cut(s) | 174 |
| Bsa29I | ATCGAT | 1 cut(s) | 1424 |
| BsaAI | YACGTR | 1 cut(s) | 736 |
| BsaJI | CCNNGG | 2 cut(s) | 172, 850 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 65 |
| Bse118I | RCCGGY | 1 cut(s) | 1330 |
| Bse1I | ACTGG | 3 cut(s) | 428, 461, 663 |
| Bse21I | CCTNAGG | 1 cut(s) | 1664 |
| BseBI | CCWGG | 1 cut(s) | 1506 |
| BseCI | ATCGAT | 1 cut(s) | 1424 |
| BseDI | CCNNGG | 2 cut(s) | 172, 850 |
| BseGI | GGATG | 3 cut(s) | 587, 1090, 1839 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 65 |
| BseMII | CTCAG | 4 cut(s) | 846, 1174, 1347, 1678 |
| BseNI | ACTGG | 3 cut(s) | 428, 461, 663 |
| BseRI | GAGGAG | 1 cut(s) | 636 |
| BseSI | GKGCMC | 3 cut(s) | 181, 642, 1465 |
| BseX3I | CGGCCG | 1 cut(s) | 520 |
| BseXI | GCAGC | 7 cut(s) | 17, 133, 721, 1238, 1280, 1474, 1477 |
| BseYI | CCCAGC | 1 cut(s) | 634 |
| BsgI | GTGCAG | 3 cut(s) | 1215, 1227, 1287 |
| Bsh1236I | CGCG | 1 cut(s) | 525 |
| Bsh1285I | CGRYCG | 1 cut(s) | 523 |
| BshFI | GGCC | 6 cut(s) | 350, 453, 522, 614, 1334, 1695 |
| BshNI | GGYRCC | 1 cut(s) | 1460 |
| BshVI | ATCGAT | 1 cut(s) | 1424 |
| BsiEI | CGRYCG | 1 cut(s) | 523 |
| BsiHKAI | GWGCWC | 2 cut(s) | 181, 535 |
| BsiSI | CCGG | 2 cut(s) | 174, 1331 |
| BslFI | GGGAC | 1 cut(s) | 223 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 65 |
| BsmAI | GTCTC | 1 cut(s) | 60 |
| BsmBI | CGTCTC | 1 cut(s) | 60 |
| BsmFI | GGGAC | 1 cut(s) | 223 |
| BsmI | GAATGC | 4 cut(s) | 148, 670, 930, 1183 |
| BsnI | GGCC | 6 cut(s) | 350, 453, 522, 614, 1334, 1695 |
| Bsp1286I | GDGCHC | 5 cut(s) | 181, 535, 642, 1161, 1465 |
| Bsp143I | GATC | 5 cut(s) | 106, 163, 717, 970, 1097 |
| BspACI | CCGC | 5 cut(s) | 204, 351, 523, 675, 1722 |
| BspANI | GGCC | 6 cut(s) | 350, 453, 522, 614, 1334, 1695 |
| BspCNI | CTCAG | 4 cut(s) | 845, 1173, 1348, 1677 |
| BspDI | ATCGAT | 1 cut(s) | 1424 |
| BspFNI | CGCG | 1 cut(s) | 525 |
| BspLI | GGNNCC | 2 cut(s) | 452, 1462 |
| BspPI | GGATC | 1 cut(s) | 101 |
| BspQI | GCTCTTC | 1 cut(s) | 222 |
| BspT107I | GGYRCC | 1 cut(s) | 1460 |
| BsrFI | RCCGGY | 1 cut(s) | 1330 |
| BsrI | ACTGG | 3 cut(s) | 428, 461, 663 |
| BssAI | RCCGGY | 1 cut(s) | 1330 |
| BssECI | CCNNGG | 2 cut(s) | 172, 850 |
| BssMI | GATC | 5 cut(s) | 106, 163, 717, 970, 1097 |
| BssSI | CACGAG | 2 cut(s) | 221, 1371 |
| BssT1I | CCWWGG | 1 cut(s) | 850 |
| Bst2BI | CACGAG | 2 cut(s) | 221, 1371 |
| Bst2UI | CCWGG | 1 cut(s) | 1506 |
| Bst4CI | ACNGT | 3 cut(s) | 879, 1453, 1501 |
| Bst6I | CTCTTC | 2 cut(s) | 222, 252 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 359 |
| BstBAI | YACGTR | 1 cut(s) | 736 |
| BstC8I | GCNNGC | 4 cut(s) | 469, 1332, 1803, 1807 |
| BstDEI | CTNAG | 7 cut(s) | 698, 832, 1160, 1336, 1356, 1543, 1664 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 63 |
| BstF5I | GGATG | 3 cut(s) | 587, 1090, 1839 |
| BstFNI | CGCG | 1 cut(s) | 525 |
| BstKTI | GATC | 5 cut(s) | 109, 166, 720, 973, 1100 |
| BstMAI | GTCTC | 1 cut(s) | 60 |
| BstMBI | GATC | 5 cut(s) | 106, 163, 717, 970, 1097 |
| BstMCI | CGRYCG | 1 cut(s) | 523 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 359, 1288 |
| BstNI | CCWGG | 1 cut(s) | 1506 |
| BstNSI | RCATGY | 2 cut(s) | 46, 1226 |
| BstSCI | CCNGG | 2 cut(s) | 172, 1504 |
| BstSFI | CTRYAG | 1 cut(s) | 1020 |
| BstSLI | GKGCMC | 3 cut(s) | 181, 642, 1465 |
| BstUI | CGCG | 1 cut(s) | 525 |
| BstV1I | GCAGC | 7 cut(s) | 17, 133, 721, 1238, 1280, 1474, 1477 |
| BstV2I | GAAGAC | 1 cut(s) | 1659 |
| BstX2I | RGATCY | 1 cut(s) | 970 |
| BstYI | RGATCY | 1 cut(s) | 970 |
| BstZI | CGGCCG | 1 cut(s) | 520 |
| Bsu15I | ATCGAT | 1 cut(s) | 1424 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1664 |
| BsuI | GTATCC | 1 cut(s) | 612 |
| BsuRI | GGCC | 6 cut(s) | 350, 453, 522, 614, 1334, 1695 |
| BsuTUI | ATCGAT | 1 cut(s) | 1424 |
| BtgZI | GCGATG | 3 cut(s) | 108, 321, 540 |
| BtrI | CACGTC | 1 cut(s) | 955 |
| BtsCI | GGATG | 3 cut(s) | 587, 1090, 1839 |
| BtsIMutI | CAGTG | 4 cut(s) | 454, 656, 1168, 1617 |
| Cac8I | GCNNGC | 4 cut(s) | 469, 1332, 1803, 1807 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1505 |
| Cfr10I | RCCGGY | 1 cut(s) | 1330 |
| Cfr13I | GGNCC | 2 cut(s) | 451, 613 |
| ClaI | ATCGAT | 1 cut(s) | 1424 |
| Csp6I | GTAC | 3 cut(s) | 115, 737, 1322 |
| CviAII | CATG | 9 cut(s) | 43, 497, 890, 899, 917, 946, 1223, 1726, 1776 |
| CviQI | GTAC | 3 cut(s) | 115, 737, 1322 |
| DdeI | CTNAG | 7 cut(s) | 698, 832, 1160, 1336, 1356, 1543, 1664 |
| DpnI | GATC | 5 cut(s) | 108, 165, 719, 972, 1099 |
| DpnII | GATC | 5 cut(s) | 106, 163, 717, 970, 1097 |
| DraI | TTTAAA | 1 cut(s) | 1855 |
| DraIII | CACNNNGTG | 1 cut(s) | 253 |
| EaeI | YGGCCR | 2 cut(s) | 348, 520 |
| EagI | CGGCCG | 1 cut(s) | 520 |
| Eam1104I | CTCTTC | 2 cut(s) | 222, 252 |
| EarI | CTCTTC | 2 cut(s) | 222, 252 |
| EclXI | CGGCCG | 1 cut(s) | 520 |
| Eco130I | CCWWGG | 1 cut(s) | 850 |
| Eco147I | AGGCCT | 1 cut(s) | 1695 |
| Eco24I | GRGCYC | 1 cut(s) | 1161 |
| Eco52I | CGGCCG | 1 cut(s) | 520 |
| Eco57I | CTGAAG | 2 cut(s) | 81, 578 |
| Eco81I | CCTNAGG | 1 cut(s) | 1664 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 63 |
| EcoRI | GAATTC | 1 cut(s) | 1629 |
| EcoRII | CCWGG | 1 cut(s) | 1504 |
| EcoT14I | CCWWGG | 1 cut(s) | 850 |
| EcoT38I | GRGCYC | 1 cut(s) | 1161 |
| ErhI | CCWWGG | 1 cut(s) | 850 |
| Esp3I | CGTCTC | 1 cut(s) | 60 |
| FaeI | CATG | 9 cut(s) | 46, 500, 893, 902, 920, 949, 1226, 1729, 1779 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 995, 1027, 1541, 1573 |
| FaqI | GGGAC | 1 cut(s) | 223 |
| FatI | CATG | 9 cut(s) | 42, 496, 889, 898, 916, 945, 1222, 1725, 1775 |
| FokI | GGATG | 3 cut(s) | 594, 1097, 1846 |
| FriOI | GRGCYC | 1 cut(s) | 1161 |
| FspBI | CTAG | 1 cut(s) | 794 |
| GsaI | CCCAGC | 1 cut(s) | 638 |
| GsuI | CTGGAG | 1 cut(s) | 411 |
| HaeIII | GGCC | 6 cut(s) | 350, 453, 522, 614, 1334, 1695 |
| HapII | CCGG | 2 cut(s) | 174, 1331 |
| Hin1II | CATG | 9 cut(s) | 46, 500, 893, 902, 920, 949, 1226, 1729, 1779 |
| HinfI | GANTC | 8 cut(s) | 424, 505, 865, 885, 977, 1421, 1580, 1772 |
| HpaII | CCGG | 2 cut(s) | 174, 1331 |
| HphI | GGTGA | 5 cut(s) | 146, 962, 1375, 1417, 1693 |
| Hpy166II | GTNNAC | 2 cut(s) | 179, 559 |
| Hpy188I | TCNGA | 6 cut(s) | 574, 597, 769, 923, 1016, 1579 |
| Hpy188III | TCNNGA | 7 cut(s) | 59, 221, 232, 509, 974, 1130, 1520 |
| Hpy8I | GTNNAC | 2 cut(s) | 179, 559 |
| Hpy99I | CGWCG | 2 cut(s) | 1131, 1606 |
| HpyAV | CCTTC | 4 cut(s) | 59, 810, 1402, 1406 |
| HpyCH4III | ACNGT | 3 cut(s) | 879, 1453, 1501 |
| HpyCH4IV | ACGT | 3 cut(s) | 735, 954, 1642 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 359, 1288 |
| HpyF3I | CTNAG | 7 cut(s) | 698, 832, 1160, 1336, 1356, 1543, 1664 |
| HpySE526I | ACGT | 3 cut(s) | 735, 954, 1642 |
| Hsp92II | CATG | 9 cut(s) | 46, 500, 893, 902, 920, 949, 1226, 1729, 1779 |
| KroI | GCCGGC | 1 cut(s) | 1330 |
| KroNI | GCCGGC | 1 cut(s) | 1332 |
| Kzo9I | GATC | 5 cut(s) | 106, 163, 717, 970, 1097 |
| LguI | GCTCTTC | 1 cut(s) | 222 |
| Lsp1109I | GCAGC | 7 cut(s) | 17, 133, 721, 1238, 1280, 1474, 1477 |
| LweI | GCATC | 1 cut(s) | 1824 |
| MaeI | CTAG | 1 cut(s) | 794 |
| MaeII | ACGT | 3 cut(s) | 735, 954, 1642 |
| MaeIII | GTNAC | 5 cut(s) | 243, 391, 835, 950, 1471 |
| MalI | GATC | 5 cut(s) | 108, 165, 719, 972, 1099 |
| MboI | GATC | 5 cut(s) | 106, 163, 717, 970, 1097 |
| MflI | RGATCY | 1 cut(s) | 970 |
| MhlI | GDGCHC | 5 cut(s) | 181, 535, 642, 1161, 1465 |
| MlyI | GAGTC | 4 cut(s) | 418, 499, 894, 971 |
| MmeI | TCCRAC | 1 cut(s) | 901 |
| MroNI | GCCGGC | 1 cut(s) | 1330 |
| MseI | TTAA | 9 cut(s) | 39, 372, 861, 1047, 1143, 1187, 1206, 1251, 1854 |
| MslI | CAYNNNNRTG | 2 cut(s) | 174, 1682 |
| MspI | CCGG | 2 cut(s) | 174, 1331 |
| MspR9I | CCNGG | 2 cut(s) | 174, 1506 |
| Mva1269I | GAATGC | 4 cut(s) | 148, 670, 930, 1183 |
| MvaI | CCWGG | 1 cut(s) | 1506 |
| MvnI | CGCG | 1 cut(s) | 525 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 359, 1288 |
| NaeI | GCCGGC | 1 cut(s) | 1332 |
| NciI | CCSGG | 1 cut(s) | 174 |
| NdeII | GATC | 5 cut(s) | 106, 163, 717, 970, 1097 |
| NgoMIV | GCCGGC | 1 cut(s) | 1330 |
| NlaIII | CATG | 9 cut(s) | 46, 500, 893, 902, 920, 949, 1226, 1729, 1779 |
| NlaIV | GGNNCC | 2 cut(s) | 452, 1462 |
| NmuCI | GTSAC | 1 cut(s) | 950 |
| NspI | RCATGY | 2 cut(s) | 46, 1226 |
| OliI | CACNNNNGTG | 1 cut(s) | 174 |
| PceI | AGGCCT | 1 cut(s) | 1695 |
| PciSI | GCTCTTC | 1 cut(s) | 222 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 228 |
| PctI | GAATGC | 4 cut(s) | 148, 670, 930, 1183 |
| PdiI | GCCGGC | 1 cut(s) | 1332 |
| PfeI | GAWTC | 4 cut(s) | 865, 1421, 1580, 1772 |
| PleI | GAGTC | 4 cut(s) | 418, 499, 893, 971 |
| PpsI | GAGTC | 4 cut(s) | 418, 499, 893, 971 |
| Ppu21I | YACGTR | 1 cut(s) | 736 |
| Psp6I | CCWGG | 1 cut(s) | 1504 |
| PspFI | CCCAGC | 1 cut(s) | 634 |
| PspGI | CCWGG | 1 cut(s) | 1504 |
| PspN4I | GGNNCC | 2 cut(s) | 452, 1462 |
| PspPI | GGNCC | 2 cut(s) | 451, 613 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1505 |
| PsuI | RGATCY | 1 cut(s) | 970 |
| RsaI | GTAC | 3 cut(s) | 116, 738, 1323 |
| RsaNI | GTAC | 3 cut(s) | 115, 737, 1322 |
| RseI | CAYNNNNRTG | 2 cut(s) | 174, 1682 |
| SapI | GCTCTTC | 1 cut(s) | 222 |
| SaqAI | TTAA | 9 cut(s) | 39, 372, 861, 1047, 1143, 1187, 1206, 1251, 1854 |
| Sau3AI | GATC | 5 cut(s) | 106, 163, 717, 970, 1097 |
| Sau96I | GGNCC | 2 cut(s) | 451, 613 |
| SchI | GAGTC | 4 cut(s) | 418, 499, 894, 971 |
| ScrFI | CCNGG | 2 cut(s) | 174, 1506 |
| SduI | GDGCHC | 5 cut(s) | 181, 535, 642, 1161, 1465 |
| SfaNI | GCATC | 1 cut(s) | 1824 |
| SfcI | CTRYAG | 1 cut(s) | 1020 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 174, 1682 |
| SmlI | CTYRAG | 2 cut(s) | 507, 1763 |
| SmoI | CTYRAG | 2 cut(s) | 507, 1763 |
| SseBI | AGGCCT | 1 cut(s) | 1695 |
| SsiI | CCGC | 5 cut(s) | 204, 351, 523, 675, 1722 |
| SspI | AATATT | 1 cut(s) | 1104 |
| SspMI | CTAG | 1 cut(s) | 794 |
| StuI | AGGCCT | 1 cut(s) | 1695 |
| StyD4I | CCNGG | 2 cut(s) | 172, 1504 |
| StyI | CCWWGG | 1 cut(s) | 850 |
| TaaI | ACNGT | 3 cut(s) | 879, 1453, 1501 |
| TaiI | ACGT | 3 cut(s) | 738, 957, 1645 |
| TaqI | TCGA | 8 cut(s) | 23, 166, 231, 814, 980, 1129, 1424, 1601 |
| TauI | GCSGC | 3 cut(s) | 353, 525, 1724 |
| TfiI | GAWTC | 4 cut(s) | 865, 1421, 1580, 1772 |
| Tru1I | TTAA | 9 cut(s) | 39, 372, 861, 1047, 1143, 1187, 1206, 1251, 1854 |
| Tru9I | TTAA | 9 cut(s) | 39, 372, 861, 1047, 1143, 1187, 1206, 1251, 1854 |
| TscAI | CASTG | 4 cut(s) | 461, 663, 1168, 1617 |
| TseFI | GTSAC | 1 cut(s) | 950 |
| TseI | GCWGC | 7 cut(s) | 5, 146, 709, 1226, 1268, 1487, 1490 |
| Tsp45I | GTSAC | 1 cut(s) | 950 |
| TspDTI | ATGAA | 6 cut(s) | 186, 915, 1033, 1097, 1101, 1442 |
| TspRI | CASTG | 4 cut(s) | 461, 663, 1168, 1617 |
| VneI | GTGCAC | 1 cut(s) | 177 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 63 |
| XapI | RAATTY | 5 cut(s) | 385, 781, 932, 1348, 1629 |
| XceI | RCATGY | 2 cut(s) | 46, 1226 |
| XspI | CTAG | 1 cut(s) | 794 |