protein ubiquitination
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 919 |
| AciI | CCGC | 5 cut(s) | 127, 171, 347, 684, 789 |
| AclWI | GGATC | 2 cut(s) | 357, 370 |
| AcsI | RAATTY | 2 cut(s) | 52, 598 |
| AcuI | CTGAAG | 3 cut(s) | 276, 306, 794 |
| AfaI | GTAC | 1 cut(s) | 340 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 400 |
| AflIII | ACRYGT | 1 cut(s) | 1025 |
| AgsI | TTSAA | 7 cut(s) | 247, 353, 359, 479, 603, 820, 904 |
| AjnI | CCWGG | 2 cut(s) | 140, 458 |
| AleI | CACNNNNGTG | 1 cut(s) | 888 |
| AluBI | AGCT | 7 cut(s) | 6, 21, 110, 312, 772, 796, 947 |
| AluI | AGCT | 7 cut(s) | 6, 21, 110, 312, 772, 796, 947 |
| Alw21I | GWGCWC | 1 cut(s) | 15 |
| Alw26I | GTCTC | 1 cut(s) | 566 |
| AlwI | GGATC | 2 cut(s) | 357, 370 |
| ApeKI | GCWGC | 3 cut(s) | 344, 485, 523 |
| ApoI | RAATTY | 2 cut(s) | 52, 598 |
| AsuHPI | GGTGA | 3 cut(s) | 40, 902, 965 |
| BamHI | GGATCC | 1 cut(s) | 362 |
| BbsI | GAAGAC | 1 cut(s) | 105 |
| Bbv12I | GWGCWC | 1 cut(s) | 15 |
| BbvI | GCAGC | 3 cut(s) | 356, 497, 510 |
| BccI | CCATC | 6 cut(s) | 202, 212, 314, 493, 500, 684 |
| BceAI | ACGGC | 2 cut(s) | 135, 866 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 995, 1029 |
| BciT130I | CCWGG | 2 cut(s) | 142, 460 |
| BclI | TGATCA | 1 cut(s) | 867 |
| BcoDI | GTCTC | 1 cut(s) | 566 |
| BfaI | CTAG | 3 cut(s) | 95, 272, 915 |
| BisI | GCNGC | 4 cut(s) | 345, 486, 524, 789 |
| BlpI | GCTNAGC | 1 cut(s) | 792 |
| BlsI | GCNGC | 4 cut(s) | 346, 487, 525, 790 |
| Bme1390I | CCNGG | 2 cut(s) | 142, 460 |
| BmiI | GGNNCC | 2 cut(s) | 84, 364 |
| BmrFI | CCNGG | 2 cut(s) | 142, 460 |
| BmsI | GCATC | 2 cut(s) | 169, 775 |
| BpiI | GAAGAC | 1 cut(s) | 105 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 438, 470 |
| BpmI | CTGGAG | 2 cut(s) | 37, 244 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 792 |
| BpuEI | CTTGAG | 1 cut(s) | 355 |
| BsaAI | YACGTR | 1 cut(s) | 938 |
| BsaBI | GATNNNNATC | 1 cut(s) | 987 |
| BsaJI | CCNNGG | 4 cut(s) | 141, 459, 804, 929 |
| BsaWI | WCCGGW | 1 cut(s) | 887 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 400 |
| Bse118I | RCCGGY | 1 cut(s) | 393 |
| Bse1I | ACTGG | 2 cut(s) | 20, 698 |
| Bse3DI | GCAATG | 2 cut(s) | 404, 870 |
| Bse8I | GATNNNNATC | 1 cut(s) | 987 |
| BseBI | CCWGG | 2 cut(s) | 142, 460 |
| BseDI | CCNNGG | 4 cut(s) | 141, 459, 804, 929 |
| BseGI | GGATG | 3 cut(s) | 181, 676, 790 |
| BseJI | GATNNNNATC | 1 cut(s) | 987 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 400 |
| BseMI | GCAATG | 2 cut(s) | 404, 870 |
| BseMII | CTCAG | 3 cut(s) | 174, 727, 783 |
| BseNI | ACTGG | 2 cut(s) | 20, 698 |
| BseXI | GCAGC | 3 cut(s) | 356, 497, 510 |
| Bsh1285I | CGRYCG | 1 cut(s) | 621 |
| BsiEI | CGRYCG | 1 cut(s) | 621 |
| BsiHKAI | GWGCWC | 1 cut(s) | 15 |
| BsiSI | CCGG | 2 cut(s) | 394, 888 |
| BslFI | GGGAC | 1 cut(s) | 212 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 400 |
| BsmAI | GTCTC | 1 cut(s) | 566 |
| BsmFI | GGGAC | 1 cut(s) | 212 |
| BsmI | GAATGC | 1 cut(s) | 1011 |
| Bsp1286I | GDGCHC | 1 cut(s) | 15 |
| Bsp143I | GATC | 4 cut(s) | 362, 618, 867, 988 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 792 |
| BspACI | CCGC | 5 cut(s) | 127, 171, 347, 684, 789 |
| BspCNI | CTCAG | 3 cut(s) | 175, 726, 784 |
| BspLI | GGNNCC | 2 cut(s) | 84, 364 |
| BspPI | GGATC | 2 cut(s) | 357, 370 |
| BsrDI | GCAATG | 2 cut(s) | 404, 870 |
| BsrFI | RCCGGY | 1 cut(s) | 393 |
| BsrI | ACTGG | 2 cut(s) | 20, 698 |
| BssAI | RCCGGY | 1 cut(s) | 393 |
| BssECI | CCNNGG | 4 cut(s) | 141, 459, 804, 929 |
| BssMI | GATC | 4 cut(s) | 362, 618, 867, 988 |
| BssNAI | GTATAC | 1 cut(s) | 920 |
| Bst1107I | GTATAC | 1 cut(s) | 920 |
| Bst2UI | CCWGG | 2 cut(s) | 142, 460 |
| Bst4CI | ACNGT | 3 cut(s) | 203, 933, 970 |
| Bst6I | CTCTTC | 2 cut(s) | 480, 770 |
| BstBAI | YACGTR | 1 cut(s) | 938 |
| BstC8I | GCNNGC | 2 cut(s) | 45, 395 |
| BstDEI | CTNAG | 3 cut(s) | 183, 713, 792 |
| BstDSI | CCRYGG | 2 cut(s) | 804, 929 |
| BstF5I | GGATG | 3 cut(s) | 181, 676, 790 |
| BstKTI | GATC | 4 cut(s) | 365, 621, 870, 991 |
| BstMAI | GTCTC | 1 cut(s) | 566 |
| BstMBI | GATC | 4 cut(s) | 362, 618, 867, 988 |
| BstMCI | CGRYCG | 1 cut(s) | 621 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 394, 446 |
| BstNI | CCWGG | 2 cut(s) | 142, 460 |
| BstNSI | RCATGY | 2 cut(s) | 155, 1029 |
| BstSCI | CCNGG | 2 cut(s) | 140, 458 |
| BstV1I | GCAGC | 3 cut(s) | 356, 497, 510 |
| BstV2I | GAAGAC | 1 cut(s) | 105 |
| BstX2I | RGATCY | 1 cut(s) | 362 |
| BstYI | RGATCY | 1 cut(s) | 362 |
| BstZ17I | GTATAC | 1 cut(s) | 920 |
| BtgI | CCRYGG | 2 cut(s) | 804, 929 |
| BtsCI | GGATG | 3 cut(s) | 181, 676, 790 |
| BtsIMutI | CAGTG | 2 cut(s) | 13, 208 |
| Cac8I | GCNNGC | 2 cut(s) | 45, 395 |
| Cfr10I | RCCGGY | 1 cut(s) | 393 |
| Csp6I | GTAC | 1 cut(s) | 339 |
| CviAII | CATG | 2 cut(s) | 152, 1026 |
| CviQI | GTAC | 1 cut(s) | 339 |
| DdeI | CTNAG | 3 cut(s) | 183, 713, 792 |
| DpnI | GATC | 4 cut(s) | 364, 620, 869, 990 |
| DpnII | GATC | 4 cut(s) | 362, 618, 867, 988 |
| Eam1104I | CTCTTC | 2 cut(s) | 480, 770 |
| EarI | CTCTTC | 2 cut(s) | 480, 770 |
| EciI | GGCGGA | 2 cut(s) | 142, 673 |
| Eco57I | CTGAAG | 3 cut(s) | 276, 306, 794 |
| EcoRII | CCWGG | 2 cut(s) | 140, 458 |
| FaeI | CATG | 2 cut(s) | 155, 1029 |
| FaqI | GGGAC | 1 cut(s) | 212 |
| FatI | CATG | 2 cut(s) | 151, 1025 |
| FauI | CCCGC | 1 cut(s) | 164 |
| FbaI | TGATCA | 1 cut(s) | 867 |
| FblI | GTMKAC | 1 cut(s) | 919 |
| Fnu4HI | GCNGC | 4 cut(s) | 345, 486, 524, 789 |
| FokI | GGATG | 3 cut(s) | 188, 663, 797 |
| Fsp4HI | GCNGC | 4 cut(s) | 345, 486, 524, 789 |
| FspBI | CTAG | 3 cut(s) | 95, 272, 915 |
| GluI | GCNGC | 4 cut(s) | 345, 486, 524, 789 |
| GsuI | CTGGAG | 2 cut(s) | 37, 244 |
| HapII | CCGG | 2 cut(s) | 394, 888 |
| Hin1II | CATG | 2 cut(s) | 155, 1029 |
| HincII | GTYRAC | 1 cut(s) | 292 |
| HindII | GTYRAC | 1 cut(s) | 292 |
| HinfI | GANTC | 2 cut(s) | 185, 293 |
| HpaII | CCGG | 2 cut(s) | 394, 888 |
| HphI | GGTGA | 3 cut(s) | 40, 902, 965 |
| Hpy166II | GTNNAC | 3 cut(s) | 280, 292, 920 |
| Hpy188I | TCNGA | 4 cut(s) | 286, 367, 436, 1002 |
| Hpy188III | TCNNGA | 2 cut(s) | 272, 719 |
| Hpy8I | GTNNAC | 3 cut(s) | 280, 292, 920 |
| HpyAV | CCTTC | 3 cut(s) | 65, 353, 690 |
| HpyCH4III | ACNGT | 3 cut(s) | 203, 933, 970 |
| HpyCH4IV | ACGT | 1 cut(s) | 937 |
| HpyCH4V | TGCA | 2 cut(s) | 151, 636 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 394, 446 |
| HpyF3I | CTNAG | 3 cut(s) | 183, 713, 792 |
| HpySE526I | ACGT | 1 cut(s) | 937 |
| Hsp92II | CATG | 2 cut(s) | 155, 1029 |
| KroI | GCCGGC | 1 cut(s) | 393 |
| KroNI | GCCGGC | 1 cut(s) | 395 |
| Ksp22I | TGATCA | 1 cut(s) | 867 |
| Kzo9I | GATC | 4 cut(s) | 362, 618, 867, 988 |
| LmnI | GCTCC | 1 cut(s) | 18 |
| Lsp1109I | GCAGC | 3 cut(s) | 356, 497, 510 |
| LweI | GCATC | 2 cut(s) | 169, 775 |
| MaeI | CTAG | 3 cut(s) | 95, 272, 915 |
| MaeII | ACGT | 1 cut(s) | 937 |
| MaeIII | GTNAC | 3 cut(s) | 754, 933, 1021 |
| MalI | GATC | 4 cut(s) | 364, 620, 869, 990 |
| MboI | GATC | 4 cut(s) | 362, 618, 867, 988 |
| MboII | GAAGA | 6 cut(s) | 106, 110, 467, 658, 787, 992 |
| MflI | RGATCY | 1 cut(s) | 362 |
| MhlI | GDGCHC | 1 cut(s) | 15 |
| MluCI | AATT | 4 cut(s) | 52, 465, 598, 908 |
| MlyI | GAGTC | 2 cut(s) | 194, 287 |
| MmeI | TCCRAC | 1 cut(s) | 819 |
| MnlI | CCTC | 5 cut(s) | 96, 397, 430, 483, 607 |
| MroNI | GCCGGC | 1 cut(s) | 393 |
| MseI | TTAA | 2 cut(s) | 423, 1087 |
| MslI | CAYNNNNRTG | 1 cut(s) | 888 |
| MspA1I | CMGCKG | 2 cut(s) | 347, 791 |
| MspI | CCGG | 2 cut(s) | 394, 888 |
| MspR9I | CCNGG | 2 cut(s) | 142, 460 |
| Mva1269I | GAATGC | 1 cut(s) | 1011 |
| MvaI | CCWGG | 2 cut(s) | 142, 460 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 394, 446 |
| NaeI | GCCGGC | 1 cut(s) | 395 |
| NdeII | GATC | 4 cut(s) | 362, 618, 867, 988 |
| NgoMIV | GCCGGC | 1 cut(s) | 393 |
| NlaIII | CATG | 2 cut(s) | 155, 1029 |
| NlaIV | GGNNCC | 2 cut(s) | 84, 364 |
| NspI | RCATGY | 2 cut(s) | 155, 1029 |
| OliI | CACNNNNGTG | 1 cut(s) | 888 |
| PciI | ACATGT | 1 cut(s) | 1025 |
| PctI | GAATGC | 1 cut(s) | 1011 |
| PdiI | GCCGGC | 1 cut(s) | 395 |
| PkrI | GCNGC | 4 cut(s) | 346, 487, 525, 790 |
| Ple19I | CGATCG | 1 cut(s) | 621 |
| PleI | GAGTC | 2 cut(s) | 193, 287 |
| PpsI | GAGTC | 2 cut(s) | 193, 287 |
| Ppu21I | YACGTR | 1 cut(s) | 938 |
| PscI | ACATGT | 1 cut(s) | 1025 |
| Psp6I | CCWGG | 2 cut(s) | 140, 458 |
| PspGI | CCWGG | 2 cut(s) | 140, 458 |
| PspN4I | GGNNCC | 2 cut(s) | 84, 364 |
| PsuI | RGATCY | 1 cut(s) | 362 |
| PvuI | CGATCG | 1 cut(s) | 621 |
| RsaI | GTAC | 1 cut(s) | 340 |
| RsaNI | GTAC | 1 cut(s) | 339 |
| RseI | CAYNNNNRTG | 1 cut(s) | 888 |
| SaqAI | TTAA | 2 cut(s) | 423, 1087 |
| SatI | GCNGC | 4 cut(s) | 345, 486, 524, 789 |
| Sau3AI | GATC | 4 cut(s) | 362, 618, 867, 988 |
| SchI | GAGTC | 2 cut(s) | 194, 287 |
| ScrFI | CCNGG | 2 cut(s) | 142, 460 |
| SduI | GDGCHC | 1 cut(s) | 15 |
| SfaNI | GCATC | 2 cut(s) | 169, 775 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 888 |
| SmlI | CTYRAG | 1 cut(s) | 334 |
| SmoI | CTYRAG | 1 cut(s) | 334 |
| Sse9I | AATT | 4 cut(s) | 52, 465, 598, 908 |
| SsiI | CCGC | 5 cut(s) | 127, 171, 347, 684, 789 |
| SspMI | CTAG | 3 cut(s) | 95, 272, 915 |
| StyD4I | CCNGG | 2 cut(s) | 140, 458 |
| TaaI | ACNGT | 3 cut(s) | 203, 933, 970 |
| TaiI | ACGT | 1 cut(s) | 940 |
| TaqI | TCGA | 4 cut(s) | 69, 296, 621, 765 |
| TasI | AATT | 4 cut(s) | 52, 465, 598, 908 |
| TatI | WGTACW | 1 cut(s) | 338 |
| TauI | GCSGC | 1 cut(s) | 791 |
| Tru1I | TTAA | 2 cut(s) | 423, 1087 |
| Tru9I | TTAA | 2 cut(s) | 423, 1087 |
| TscAI | CASTG | 2 cut(s) | 20, 208 |
| TseI | GCWGC | 3 cut(s) | 344, 485, 523 |
| TspDTI | ATGAA | 2 cut(s) | 548, 921 |
| TspGWI | ACGGA | 2 cut(s) | 825, 1046 |
| TspRI | CASTG | 2 cut(s) | 20, 208 |
| XapI | RAATTY | 2 cut(s) | 52, 598 |
| XbaI | TCTAGA | 1 cut(s) | 271 |
| XceI | RCATGY | 2 cut(s) | 155, 1029 |
| XmiI | GTMKAC | 1 cut(s) | 919 |
| XspI | CTAG | 3 cut(s) | 95, 272, 915 |