Rmu_sc0002222.1_g000002

Domain of unknown function

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002222.1
OG0000027
Physical Location & Seq
Forward (+)
4842 .. 15484
10643 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002222.1_g000002.1.cds

Sequence Viewer

Length: 2340 bp
atggctactggtggcaagaataaaggaagagatcgatggaaagatggcgctgatgatagcagcggtataaatatacaagctcccgctattttagatattcatgatatttctatacctgtttcaatctcaaaagatgatggaggtactcaaagggatgtcgttgtctcagctgtgagtttacataaaaggctcgttaaaagcctccttgatgttttgggaatcaatcgcatatatgaaatgaaattgatccatgttcgaatgtatgaatttatacgttgcatgggtgaagccacaagaaatagggatgatcttacacttgtgcaacttaatttgatgaagaaatcaatcttcgaagctatagaacgaggggatcttgagtttatcactcgtatttgtaaagcaaatgcagaacttgtgaacatcttggatgaaaaaggaagaagcatatttcatttcgccattgaatgtcgtcaagaagaaatttattctcttatctacgcctttatccaaatcgcaacactaatccaggtagcagactacccatctccaaccttcccctcccccatggtggtgttgccgtgcaatggatcttccccacaccaatccttccccataaccacaatccagatctcggtacagccatctccatcacatgagcaagacgagaacaaacgccgccagtccccaaccttagagccacggacaaacgtcacaaaccatcaactagaaccacccatcccgccacacacacagtttgccggcgaggcctacagccacggccctcaccgaggtgcagcaggacaggatcacacactattgaaagcgagcgtagcctccttctatcactcttttctcgacttctctctatccaatggcttccactccattgatgctgtcacagtaagcttcgctgcttcccttatcctcgctgaaggaggcagcgatcctgacttaggaaagattggtggtggcctcattcgcaggtcctcccaacctttcctaattggaaaacctctgacctgcaagccgattgatcctaagtgtgtgatcacaacatggtactccgaggtgggggttgatgttttgatcgagccctggttttctttgaagagtatgactgcgtcaaacctctctcatgaagatcttgtagctattggtattgtttctagccctagagacaagggcaaagaaaagtttaaaactttcctggtcttcttgcctaatactagaaatatggtcttctactactttcatcttagtttctccagttgtacaccaattgaggaggtcaagagtattgttcctctagcagcacatgagactcgaaatacttcagacgatttgacagctcgtgaactatttcataagaatcacgagcaattgatggtggaagcagaaatatctatgaaagggacagcaacttcttgtacagttgtaggtgctttgattgttaccatcatgtttgccgcagcattcacaattcttggtggaaataacgaagaggatttcctccaaaacttacccacaaagatgatgataggtcttttaacccttttcatcgctattgccaccatgatgatcgcattttcttgtggccttgtcattatgcttaatggaaaatattcatgggttcctattccaggcatcttggttgctagtatcccagtgacctcatttgcgtggatgttgtttcccctccttgtgcagactttcatttctacttatggaccgggaatattcaacaggaaagtcaaacagtgcccagagacgtgcatgtaccctcacaccaccattcccgctactccaccatcgatgtgggccttcactgtcgccgctctgtcattgccgtcagaccatcagtgtcagacgccgtctacctccatgaaaccagattcaaacagcctttatccaaatcacaacactaatccaggtagcagactacccatctccaaccttcccctcccccatggtggtgctgccgtgcaatggatcttccccacaccaatccttccccataaccacaatccagatctcgagccacggacaaacgtcacaaaccatcaactagaaccacccatcccgccacacacacagtttgccggcgaggcctacagccacgacccgcgccgaggtgcagcaggacaggatcacacactattgaaagcgagcgcagagtataaagcttgggccacagacaatgaaaaggtgaaaagttggctcattgactccatggagtcctctattatgaaccggtatattcgtcttccgaatctaactacaccatatgggctcctctcatgcgaatgcgcattggagcatgagggaaggctggttatctga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank_2 DUF4219 PGG

Protein Analysis

779

Amino Acids

86.1

Weight (kDa)

6.3

Isoelectric Point (pI)

42.5

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000027)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G18670 AT3G18670 AT3G54065
fragaria_vesca FvH4_1g26570 FvH4_1g26570 FvH4_5g19270 FvH4_5g19273 FvH4_5g35840 FvH4_5g36340 FvH4_5g36630 FvH4_5g37181 FvH4_5g37182 FvH4_5g37185 FvH4_5g37240 FvH4_5g37260 FvH4_6g21440 FvH4_6g44571 FvH4_6g44572 FvH4_6g44610 FvH4_6g44620 FvH4_6g44650 FvH4_6g44660 FvH4_6g45151 FvH4_6g45152 FvH4_6g45152 FvH4_6g45153 FvH4_6g45153 FvH4_6g45153 FvH4_6g45153 FvH4_6g45153 FvH4_6g45154 FvH4_6g51440 FvH4_7g08090 FvH4_7g08090 FvH4_7g08090 FvH4_7g08090 FvH4_7g08090 FvH4_7g08090
malus_domestica MD00G1010300.v1.1 MD00G1010400.v1.1 MD00G1010500.v1.1 MD00G1011000.v1.1 MD00G1011200.v1.1 MD00G1011500.v1.1 MD00G1011900.v1.1 MD03G1133900.v1.1 MD03G1134100.v1.1 MD09G1086300.v1.1 MD09G1086500.v1.1 MD09G1086900.v1.1 MD09G1087000.v1.1 MD09G1088000.v1.1 MD09G1088100.v1.1 MD09G1088200.v1.1 MD09G1088300.v1.1 MD09G1089000.v1.1 MD09G1089300.v1.1 MD09G1133800.v1.1 MD16G1219400.v1.1 MD17G1027900.v1.1 MD17G1028400.v1.1 MD17G1028600.v1.1 MD17G1028700.v1.1 MD17G1028900.v1.1 MD17G1029000.v1.1 MD17G1029100.v1.1 MD17G1029200.v1.1 MD17G1075400.v1.1 MD17G1076000.v1.1 MD17G1077000.v1.1 MD17G1077100.v1.1 MD17G1077800.v1.1 MD17G1078000.v1.1 MD17G1078100.v1.1 MD17G1078300.v1.1 MD17G1100900.v1.1 MD17G1101100.v1.1 MD17G1101400.v1.1 MD17G1104200.v1.1 MD17G1104500.v1.1 MD17G1121300.v1.1 MD17G1121600.v1.1 MD17G1121900.v1.1 MD17G1122700.v1.1 MD17G1218800.v1.1
prunus_persica Prupe.2G033800_v2.0.a1 Prupe.2G033900_v2.0.a1 Prupe.2G080300_v2.0.a1 Prupe.2G080700_v2.0.a1 Prupe.2G080900_v2.0.a1 Prupe.2G081100_v2.0.a1 Prupe.2G081100_v2.0.a1 Prupe.2G081200_v2.0.a1 Prupe.2G081200_v2.0.a1 Prupe.2G081200_v2.0.a1 Prupe.2G081200_v2.0.a1 Prupe.2G081700_v2.0.a1 Prupe.2G081700_v2.0.a1 Prupe.2G082000_v2.0.a1 Prupe.2G082100_v2.0.a1 Prupe.2G082100_v2.0.a1 Prupe.2G082200_v2.0.a1 Prupe.2G082300_v2.0.a1 Prupe.2G082700_v2.0.a1 Prupe.2G082800_v2.0.a1 Prupe.2G082900_v2.0.a1 Prupe.3G235600_v2.0.a1 Prupe.3G236300_v2.0.a1 Prupe.3G236300_v2.0.a1 Prupe.3G236600_v2.0.a1 Prupe.3G236600_v2.0.a1 Prupe.3G236800_v2.0.a1 Prupe.3G237000_v2.0.a1 Prupe.3G237100_v2.0.a1 Prupe.3G237300_v2.0.a1 Prupe.3G237400_v2.0.a1 Prupe.3G237500_v2.0.a1 Prupe.3G237500_v2.0.a1 Prupe.3G237500_v2.0.a1 Prupe.4G282500_v2.0.a1 Prupe.4G282500_v2.0.a1
pyrus_communis pycom03g08990 pycom03g09000 pycom09g01180 pycom09g01190 pycom09g01220 pycom09g01230 pycom09g01360 pycom09g01370 pycom09g01380 pycom09g01410 pycom09g05500 pycom11g10280 pycom11g10290 pycom11g10310 pycom16g18270 pycom16g18280 pycom17g02280 pycom17g02290 pycom17g02300 pycom17g02360 pycom17g02390 pycom17g02410 pycom17g02440 pycom17g02460 pycom17g02470 pycom17g02480 pycom17g02510 pycom17g02530 pycom17g02540 pycom17g02550 pycom17g02560 pycom17g02570 pycom17g02580 pycom17g02630 pycom17g02640 pycom17g04970 pycom17g04980 pycom17g05010 pycom17g07090 pycom17g07620 pycom17g07630 pycom17g07640 pycom17g07650 pycom17g07660 pycom17g07740 pycom17g07760 pycom17g07770 pycom17g09580 pycom17g11170 pycom17g11200 pycom17g11220 pycom17g11240 pycom17g11250 pycom17g11300 pycom17g11340 pycom17g11380 pycom17g11440
rosa_chinensis RchiOBHm_Chr1g0332901 RchiOBHm_Chr1g0338981 RchiOBHm_Chr1g0338991 RchiOBHm_Chr1g0341201 RchiOBHm_Chr1g0341211 RchiOBHm_Chr1g0342721 RchiOBHm_Chr1g0343191 RchiOBHm_Chr2g0146761 RchiOBHm_Chr2g0161791 RchiOBHm_Chr2g0161801 RchiOBHm_Chr2g0161841 RchiOBHm_Chr2g0162041 RchiOBHm_Chr2g0162651 RchiOBHm_Chr2g0162691 RchiOBHm_Chr2g0162701 RchiOBHm_Chr2g0162711 RchiOBHm_Chr2g0162721 RchiOBHm_Chr2g0162811 RchiOBHm_Chr2g0162831 RchiOBHm_Chr2g0162841 RchiOBHm_Chr4g0416381 RchiOBHm_Chr4g0416391 RchiOBHm_Chr5g0075981 RchiOBHm_Chr6g0276101 RchiOBHm_Chr7g0214581 RchiOBHm_Chr7g0214631 RchiOBHm_Chr7g0214651 RchiOBHm_Chr7g0214721 RchiOBHm_Chr7g0223161 RchiOBHm_Chr7g0230661 RchiOBHm_Chr7g0230751 RchiOBHm_Chr7g0230781 RchiOBHm_Chr7g0234581 RchiOBHm_Chr7g0234601 RchiOBHm_Chr7g0237561 RchiOBHm_Chr7g0237571 RchiOBHm_Chr7g0238781 RchiOBHm_Chr7g0238811 RchiOBHm_Chr7g0242161 RchiOBHm_Chr7g0242401 RchiOBHm_Chr7g0242451 RchiOBHm_Chr7g0242921 RchiOBHm_Chr7g0242981 RchiOBHm_Chr7g0243111 RchiOBHm_Chr7g0243251 RchiOBHm_Chr7g0243331
rosa_laevigata RLG00000000803 RLG00000000807 RLG00000000809 RLG00000000811 RLG00000000814 RLG00000000854 RLG00000000859 RLG00000000864 RLG00000000994 RLG00000000995 RLG00000001458 RLG00000001461 RLG00000001474 RLG00000001476 RLG00000002729 RLG00000002730 RLG00000003505 RLG00000008871 RLG00000008873 RLG00000018513 RLG00000021300 RLG00000021303 RLG00000021318 RLG00000021356 RLG00000021357 RLG00000029070 RLG00000029071 RLG00000029171 RLG00000029189 RLG00000029190 RLG00000029640 RLG00000034635
rosa_multiflora Rmu_co8149086.1_g000001 Rmu_co8460577.1_g000001 Rmu_sc0000429.1_g000062 Rmu_sc0000429.1_g000071 Rmu_sc0000429.1_g000081 Rmu_sc0000863.1_g000020 Rmu_sc0001488.1_g000011 Rmu_sc0001545.1_g000007 Rmu_sc0001849.1_g000068 Rmu_sc0001993.1_g000003 Rmu_sc0002222.1_g000002 Rmu_sc0002308.1_g000053 Rmu_sc0002308.1_g000069 Rmu_sc0002480.1_g000007 Rmu_sc0003179.1_g000041 Rmu_sc0004213.1_g000011 Rmu_sc0007101.1_g000012 Rmu_sc0008565.1_g000011 Rmu_sc0009298.1_g000003 Rmu_sc0010407.1_g000009 Rmu_sc0010407.1_g000013 Rmu_sc0026966.1_g000004 Rmu_ssc0000152.1_g000012 Rmu_ssc0000152.1_g000014 Rmu_ssc0000295.1_g000021 Rmu_ssc0000295.1_g000026
rosa_roxburghii Rroxscaffold_1G00029600 Rroxscaffold_2G00087790 Rroxscaffold_2G00087800 Rroxscaffold_2G00088360 Rroxscaffold_2G00088500 Rroxscaffold_2G00088530 Rroxscaffold_2G00088590 Rroxscaffold_3G00221570 Rroxscaffold_3G00222190 Rroxscaffold_3G00222240 Rroxscaffold_3G00222880 Rroxscaffold_3G00222900 Rroxscaffold_3G00223990 Rroxscaffold_3G00229750 Rroxscaffold_3G00229760 Rroxscaffold_3G00245140 Rroxscaffold_3G00245150 Rroxscaffold_3G00245200 Rroxscaffold_3G00253520 Rroxscaffold_3G00253530 Rroxscaffold_4G00294500 Rroxscaffold_4G00311800 Rroxscaffold_4G00311830 Rroxscaffold_4G00311850 Rroxscaffold_4G00313180 Rroxscaffold_4G00313210 Rroxscaffold_4G00316270 Rroxscaffold_4G00317910 Rroxscaffold_4G00317920 Rroxscaffold_5G00349290 Rroxscaffold_5G00349300 Rroxscaffold_5G00349310 Rroxscaffold_5G00351950 Rroxscaffold_5G00351960 Rroxscaffold_5G00353390 Rroxscaffold_7G00192540
rosa_rugosa Rorug01G0102500 Rorug01G0102600 Rorug01G0146400.1 Rorug01G0146500.1 Rorug01G0159400.1 Rorug01G0159500.1 Rorug02G0491900 Rorug02G0492000 Rorug02G0492100 Rorug02G0492200 Rorug02G0492300 Rorug02G0492400 Rorug02G0492500 Rorug02G0492700 Rorug02G0498500 Rorug02G0498600 Rorug02G0498800 Rorug04G0006900 Rorug04G0053700 Rorug06G0002000 Rorug06G0002100 Rorug07G0304700 Rorug07G0304800 Rorug07G0304800 Rorug07G0304800 Rorug07G0305300 Rorug07G0305400 Rorug07G0305500 Rorug07G0305500 Rorug07G0318300 Rorug07G0318600 Rorug07G0323600
rosa_samantha Rh1AG128900 Rh1AG162500 Rh1AG163000 Rh1AG164000 Rh1AG164700 Rh1AG173200 Rh1AG173300 Rh1AG173800 Rh1BG098100 Rh1BG129800 Rh1BG130600 Rh1BG141300 Rh1BG141500 Rh1BG141600 Rh1CG122700 Rh1CG151900 Rh1CG152400 Rh1CG153100 Rh1CG153500 Rh1CG161400 Rh1CG161600 Rh1DG134200 Rh1DG173500 Rh1DG173700 Rh2AG558100 Rh2AG558500 Rh2AG560200 Rh2AG564700 Rh2AG564800 Rh2BG465600 Rh2BG571700 Rh2BG572000 Rh2BG573500 Rh2CG439800 Rh2CG541800 Rh2CG542100 Rh2CG542200 Rh2CG543800 Rh2CG547300 Rh2DG474700 Rh2DG580600 Rh2DG580900 Rh2DG581200 Rh2DG581700 Rh2DG581800 Rh2DG583500 Rh2DG587200 Rh2DG587300 Rh2DG587400 Rh4AG128900 Rh4AG203800 Rh4AG319900 Rh4AG320000 Rh4BG122200 Rh4BG201100 Rh4CG136000 Rh4DG122400 Rh4DG201100 Rh4DG323600 Rh6BG077000 Rh6DG206200 Rh7AG282300 Rh7AG282500 Rh7AG283400 Rh7AG358600 Rh7AG414500 Rh7AG415200 Rh7AG415500 Rh7AG461700 Rh7AG469300 Rh7AG477800 Rh7BG273900 Rh7BG274000 Rh7BG390400 Rh7BG390500 Rh7BG391500 Rh7BG391800 Rh7BG408300 Rh7BG432000 Rh7BG439200 Rh7BG449200 Rh7BG449900 Rh7BG450400 Rh7BG450500 Rh7CG220900 Rh7CG301600 Rh7CG302700 Rh7CG377000 Rh7CG433900 Rh7CG434200 Rh7CG478800 Rh7DG286200 Rh7DG354000 Rh7DG424600 Rh7DG448000 Rh7DG462800 Rh7DG462900
rosa_wichuraiana Rw0G003440 Rw0G011970 Rw0G017120 Rw0G017130 Rw0G017140 Rw0G018470 Rw0G018480 Rw0G020440 Rw1G010470 Rw2G046180 Rw2G046210 Rw2G046230 Rw2G046390 Rw2G046400 Rw2G046710 Rw2G046720 Rw2G046730 Rw3G025310 Rw4G010410 Rw4G017250 Rw6G018270 Rw7G018180 Rw7G024130 Rw7G024160 Rw7G024170 Rw7G034060 Rw7G034250 Rw7G034260 Rw7G034400 Rw7G034410 Rw7G038210 Rw7G039020 Rw7G039060 Rw7G039280 Rw7G039400 Rw7G039470 Rw7G039880 Rw7G039890

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 2308
Acc36I ACCTGC 2 cut(s) 972, 1028
AccBSI CCGCTC 1 cut(s) 1835
AccI GTMKAC 1 cut(s) 1874
AccII CGCG 1 cut(s) 2125
AciI CCGC 9 cut(s) 63, 84, 676, 740, 1467, 1797, 1833, 2081, 2123
AclWI GGATC 8 cut(s) 241, 378, 595, 813, 938, 1028, 1997, 2154
AcsI RAATTY 2 cut(s) 266, 480
AcuI CTGAAG 2 cut(s) 951, 1317
AcyI GRCGYC 1 cut(s) 1868
AfaI GTAC 6 cut(s) 145, 636, 1061, 1273, 1429, 1778
AgeI ACCGGT 1 cut(s) 2250
AgsI TTSAA 7 cut(s) 123, 464, 820, 1108, 1741, 1896, 2161
AjiI CACGTC 1 cut(s) 1770
AjnI CCWGG 5 cut(s) 525, 1094, 1206, 1639, 1927
AleI CACNNNNGTG 1 cut(s) 789
AloI GAACNNNNNNTCC 4 cut(s) 720, 752, 2061, 2093
AluBI AGCT 7 cut(s) 80, 170, 356, 906, 1151, 1349, 2183
AluI AGCT 7 cut(s) 80, 170, 356, 906, 1151, 1349, 2183
Alw26I GTCTC 4 cut(s) 169, 1170, 1313, 1760
AlwI GGATC 8 cut(s) 241, 378, 595, 813, 938, 1028, 1997, 2154
Ama87I CYCGRG 1 cut(s) 2033
AoxI GGCC 7 cut(s) 765, 778, 970, 1594, 1818, 2106, 2187
ApeKI GCWGC 8 cut(s) 60, 794, 911, 939, 1310, 1469, 1976, 2135
ApoI RAATTY 2 cut(s) 266, 480
AsiGI ACCGGT 1 cut(s) 2250
Asp700I GAANNNNTTC 3 cut(s) 1330, 1359, 1621
AspLEI GCGC 4 cut(s) 50, 2127, 2171, 2309
AspS9I GGNCC 5 cut(s) 779, 984, 1727, 1818, 2187
AsuC2I CCSGG 1 cut(s) 1731
AsuHPI GGTGA 3 cut(s) 296, 776, 2218
AsuII TTCGAA 2 cut(s) 256, 351
AvaI CYCGRG 1 cut(s) 2033
AvaII GGWCC 2 cut(s) 984, 1727
BaeGI GKGCMC 1 cut(s) 1763
BanII GRGCYC 2 cut(s) 1095, 2292
BauI CACGAG 2 cut(s) 1350, 1373
BbsI GAAGAC 3 cut(s) 1204, 1231, 2255
BbvI GCAGC 8 cut(s) 72, 806, 898, 951, 1322, 1481, 1963, 2147
BceAI ACGGC 5 cut(s) 562, 793, 1831, 1855, 1964
BciT130I CCWGG 5 cut(s) 527, 1096, 1208, 1641, 1929
BciVI GTATCC 1 cut(s) 1670
BclI TGATCA 1 cut(s) 1047
BcnI CCSGG 1 cut(s) 1731
BcoDI GTCTC 4 cut(s) 169, 1170, 1313, 1760
BfaI CTAG 7 cut(s) 725, 1167, 1173, 1227, 1307, 1656, 2066
BfmI CTRYAG 3 cut(s) 357, 769, 2110
BfoI RGCGCY 1 cut(s) 51
BfuAI ACCTGC 2 cut(s) 972, 1028
BfuI GTATCC 1 cut(s) 1670
BglI GCCNNNNNGGC 2 cut(s) 764, 2105
BglII AGATCT 3 cut(s) 627, 1141, 2029
Bme1390I CCNGG 6 cut(s) 527, 1096, 1208, 1641, 1731, 1929
Bme18I GGWCC 2 cut(s) 984, 1727
BmeT110I CYCGRG 1 cut(s) 2033
BmgBI CACGTC 1 cut(s) 1770
BmgT120I GGNCC 5 cut(s) 779, 984, 1727, 1818, 2187
BmiI GGNNCC 2 cut(s) 1632, 2291
BmrFI CCNGG 6 cut(s) 527, 1096, 1208, 1641, 1731, 1929
BmrI ACTGGG 1 cut(s) 1658
BmsI GCATC 2 cut(s) 880, 1653
BmuI ACTGGG 1 cut(s) 1658
BoxI GACNNNNGTC 2 cut(s) 707, 2048
BpiI GAAGAC 3 cut(s) 1204, 1231, 2255
BpmI CTGGAG 1 cut(s) 1249
Bpu14I TTCGAA 2 cut(s) 256, 351
BpuEI CTTGAG 1 cut(s) 395
BpuMI CCSGG 1 cut(s) 1731
Bsa29I ATCGAT 2 cut(s) 34, 1811
BsaHI GRCGYC 1 cut(s) 1868
BsaWI WCCGGW 1 cut(s) 2250
Bse118I RCCGGY 3 cut(s) 758, 2099, 2250
Bse1I ACTGG 4 cut(s) 13, 679, 1266, 1664
Bse3DI GCAATG 3 cut(s) 589, 1841, 1991
BseBI CCWGG 5 cut(s) 527, 1096, 1208, 1641, 1929
BseCI ATCGAT 2 cut(s) 34, 1811
BseGI GGATG 6 cut(s) 160, 310, 433, 735, 1689, 2076
BseMI GCAATG 3 cut(s) 589, 1841, 1991
BseMII CTCAG 1 cut(s) 180
BseNI ACTGG 4 cut(s) 13, 679, 1266, 1664
BseRI GAGGAG 2 cut(s) 1298, 2282
BseSI GKGCMC 1 cut(s) 1763
BseXI GCAGC 8 cut(s) 72, 806, 898, 951, 1322, 1481, 1963, 2147
BsgI GTGCAG 3 cut(s) 813, 1724, 2154
Bsh1236I CGCG 1 cut(s) 2125
BshFI GGCC 7 cut(s) 767, 780, 972, 1596, 1820, 2108, 2189
BshTI ACCGGT 1 cut(s) 2250
BshVI ATCGAT 2 cut(s) 34, 1811
BsiHKCI CYCGRG 1 cut(s) 2033
BsiSI CCGG 4 cut(s) 759, 1730, 2100, 2251
BslFI GGGAC 2 cut(s) 667, 1426
BsmAI GTCTC 4 cut(s) 169, 1170, 1313, 1760
BsmBI CGTCTC 1 cut(s) 1760
BsmFI GGGAC 2 cut(s) 667, 1426
BsmI GAATGC 2 cut(s) 1472, 2309
BsnI GGCC 7 cut(s) 767, 780, 972, 1596, 1820, 2108, 2189
BsoBI CYCGRG 1 cut(s) 2033
Bsp119I TTCGAA 2 cut(s) 256, 351
Bsp1286I GDGCHC 3 cut(s) 1095, 1763, 2292
Bsp1407I TGTACA 2 cut(s) 1271, 1427
Bsp19I CCATGG 3 cut(s) 564, 1966, 2229
BspACI CCGC 9 cut(s) 63, 84, 676, 740, 1467, 1797, 1833, 2081, 2123
BspANI GGCC 7 cut(s) 767, 780, 972, 1596, 1820, 2108, 2189
BspCNI CTCAG 1 cut(s) 179
BspDI ATCGAT 2 cut(s) 34, 1811
BspFNI CGCG 1 cut(s) 2125
BspHI TCATGA 2 cut(s) 100, 1135
BspLI GGNNCC 2 cut(s) 1632, 2291
BspMI ACCTGC 2 cut(s) 972, 1028
BspPI GGATC 8 cut(s) 241, 378, 595, 813, 938, 1028, 1997, 2154
BspT104I TTCGAA 2 cut(s) 256, 351
BsrBI CCGCTC 1 cut(s) 1835
BsrDI GCAATG 3 cut(s) 589, 1841, 1991
BsrFI RCCGGY 3 cut(s) 758, 2099, 2250
BsrGI TGTACA 2 cut(s) 1271, 1427
BsrI ACTGG 4 cut(s) 13, 679, 1266, 1664
BssAI RCCGGY 3 cut(s) 758, 2099, 2250
BssNI GRCGYC 1 cut(s) 1868
BssSI CACGAG 2 cut(s) 1350, 1373
BssT1I CCWWGG 3 cut(s) 564, 1966, 2229
Bst2BI CACGAG 2 cut(s) 1350, 1373
Bst2UI CCWGG 5 cut(s) 527, 1096, 1208, 1641, 1929
Bst4CI ACNGT 6 cut(s) 753, 901, 1432, 1758, 1828, 2094
Bst6I CTCTTC 3 cut(s) 22, 1103, 1494
BstACI GRCGYC 1 cut(s) 1868
BstAUI TGTACA 2 cut(s) 1271, 1427
BstBI TTCGAA 2 cut(s) 256, 351
BstC8I GCNNGC 5 cut(s) 760, 826, 1025, 2101, 2167
BstDEI CTNAG 5 cut(s) 166, 691, 952, 1038, 1256
BstDSI CCRYGG 6 cut(s) 564, 698, 775, 1966, 2039, 2229
BstENI CCTNNNNNAGG 3 cut(s) 786, 951, 1638
BstF5I GGATG 6 cut(s) 160, 310, 433, 735, 1689, 2076
BstFNI CGCG 1 cut(s) 2125
BstH2I RGCGCY 1 cut(s) 51
BstHHI GCGC 4 cut(s) 50, 2127, 2171, 2309
BstMAI GTCTC 4 cut(s) 169, 1170, 1313, 1760
BstMWI GCNNNNNNNGC 4 cut(s) 764, 830, 978, 2105
BstNI CCWGG 5 cut(s) 527, 1096, 1208, 1641, 1929
BstNSI RCATGY 1 cut(s) 1777
BstPAI GACNNNNGTC 2 cut(s) 707, 2048
BstSCI CCNGG 6 cut(s) 525, 1094, 1206, 1639, 1729, 1927
BstSFI CTRYAG 3 cut(s) 357, 769, 2110
BstSLI GKGCMC 1 cut(s) 1763
BstUI CGCG 1 cut(s) 2125
BstV1I GCAGC 8 cut(s) 72, 806, 898, 951, 1322, 1481, 1963, 2147
BstV2I GAAGAC 3 cut(s) 1204, 1231, 2255
BstX2I RGATCY 6 cut(s) 370, 587, 627, 1141, 1989, 2029
BstXI CCANNNNNNTGG 1 cut(s) 1815
BstYI RGATCY 6 cut(s) 370, 587, 627, 1141, 1989, 2029
Bsu15I ATCGAT 2 cut(s) 34, 1811
BsuI GTATCC 1 cut(s) 1670
BsuRI GGCC 7 cut(s) 767, 780, 972, 1596, 1820, 2108, 2189
BsuTUI ATCGAT 2 cut(s) 34, 1811
BtgI CCRYGG 6 cut(s) 564, 698, 775, 1966, 2039, 2229
BtgZI GCGATG 1 cut(s) 1543
BtrI CACGTC 1 cut(s) 1770
BtsCI GGATG 6 cut(s) 160, 310, 433, 735, 1689, 2076
BtsIMutI CAGTG 4 cut(s) 1671, 1763, 1824, 1865
BveI ACCTGC 2 cut(s) 972, 1028
Cac8I GCNNGC 5 cut(s) 760, 826, 1025, 2101, 2167
CciI TCATGA 2 cut(s) 100, 1135
CfoI GCGC 4 cut(s) 50, 2127, 2171, 2309
Cfr10I RCCGGY 3 cut(s) 758, 2099, 2250
Cfr13I GGNCC 5 cut(s) 779, 984, 1727, 1818, 2187
ClaI ATCGAT 2 cut(s) 34, 1811
CseI GACGC 2 cut(s) 1110, 1876
Csp6I GTAC 6 cut(s) 144, 635, 1060, 1272, 1428, 1777
CspAI ACCGGT 1 cut(s) 2250
CviQI GTAC 6 cut(s) 144, 635, 1060, 1272, 1428, 1777
DdeI CTNAG 5 cut(s) 166, 691, 952, 1038, 1256
DraI TTTAAA 1 cut(s) 1198
Eam1104I CTCTTC 3 cut(s) 22, 1103, 1494
EarI CTCTTC 3 cut(s) 22, 1103, 1494
Eco130I CCWWGG 3 cut(s) 564, 1966, 2229
Eco147I AGGCCT 2 cut(s) 767, 2108
Eco24I GRGCYC 2 cut(s) 1095, 2292
Eco47I GGWCC 2 cut(s) 984, 1727
Eco57I CTGAAG 2 cut(s) 951, 1317
Eco88I CYCGRG 1 cut(s) 2033
EcoNI CCTNNNNNAGG 3 cut(s) 786, 951, 1638
EcoO109I RGGNCCY 1 cut(s) 984
EcoRII CCWGG 5 cut(s) 525, 1094, 1206, 1639, 1927
EcoT14I CCWWGG 3 cut(s) 564, 1966, 2229
EcoT38I GRGCYC 2 cut(s) 1095, 2292
ErhI CCWWGG 3 cut(s) 564, 1966, 2229
Esp3I CGTCTC 1 cut(s) 1760
FaqI GGGAC 2 cut(s) 667, 1426
FauI CCCGC 5 cut(s) 91, 747, 1804, 2088, 2130
FauNDI CATATG 1 cut(s) 2284
FbaI TGATCA 1 cut(s) 1047
FblI GTMKAC 1 cut(s) 1874
FokI GGATG 6 cut(s) 167, 317, 440, 722, 1696, 2063
FriOI GRGCYC 2 cut(s) 1095, 2292
FspAI RTGCGCAY 1 cut(s) 2308
FspBI CTAG 7 cut(s) 725, 1167, 1173, 1227, 1307, 1656, 2066
FspI TGCGCA 1 cut(s) 2308
GlaI GCGC 4 cut(s) 49, 2126, 2170, 2308
GsuI CTGGAG 1 cut(s) 1249
HaeII RGCGCY 1 cut(s) 51
HaeIII GGCC 7 cut(s) 767, 780, 972, 1596, 1820, 2108, 2189
HapII CCGG 4 cut(s) 759, 1730, 2100, 2251
HgaI GACGC 2 cut(s) 1110, 1876
HhaI GCGC 4 cut(s) 50, 2127, 2171, 2309
Hin1I GRCGYC 1 cut(s) 1868
Hin6I GCGC 4 cut(s) 48, 2125, 2169, 2307
HinP1I GCGC 4 cut(s) 48, 2125, 2169, 2307
HindIII AAGCTT 2 cut(s) 904, 2181
HinfI GANTC 7 cut(s) 219, 1321, 1369, 1892, 2225, 2234, 2269
HpaII CCGG 4 cut(s) 759, 1730, 2100, 2251
HphI GGTGA 3 cut(s) 296, 776, 2218
Hpy166II GTNNAC 5 cut(s) 179, 418, 1274, 1355, 1875
Hpy188I TCNGA 7 cut(s) 1017, 1066, 1336, 1852, 1866, 2268, 2339
Hpy8I GTNNAC 5 cut(s) 179, 418, 1274, 1355, 1875
HpyAV CCTTC 8 cut(s) 562, 616, 847, 926, 1831, 1964, 2018, 2319
HpyCH4III ACNGT 6 cut(s) 753, 901, 1432, 1758, 1828, 2094
HpyCH4IV ACGT 4 cut(s) 274, 708, 1769, 2049
HpyF10VI GCNNNNNNNGC 4 cut(s) 764, 830, 978, 2105
HpyF3I CTNAG 5 cut(s) 166, 691, 952, 1038, 1256
HpySE526I ACGT 4 cut(s) 274, 708, 1769, 2049
Hsp92I GRCGYC 1 cut(s) 1868
HspAI GCGC 4 cut(s) 48, 2125, 2169, 2307
KroI GCCGGC 2 cut(s) 758, 2099
KroNI GCCGGC 2 cut(s) 760, 2101
Ksp22I TGATCA 1 cut(s) 1047
LmnI GCTCC 3 cut(s) 85, 2295, 2314
Lsp1109I GCAGC 8 cut(s) 72, 806, 898, 951, 1322, 1481, 1963, 2147
LweI GCATC 2 cut(s) 880, 1653
MaeI CTAG 7 cut(s) 725, 1167, 1173, 1227, 1307, 1656, 2066
MaeII ACGT 4 cut(s) 274, 708, 1769, 2049
MaeIII GTNAC 5 cut(s) 709, 895, 1450, 1666, 2050
MbiI CCGCTC 1 cut(s) 1835
MfeI CAATTG 2 cut(s) 1278, 1379
MflI RGATCY 6 cut(s) 370, 587, 627, 1141, 1989, 2029
MhlI GDGCHC 3 cut(s) 1095, 1763, 2292
MluCI AATT 8 cut(s) 242, 266, 328, 480, 1002, 1278, 1379, 1479
MlyI GAGTC 3 cut(s) 1315, 2219, 2243
MmeI TCCRAC 2 cut(s) 572, 1974
MroNI GCCGGC 2 cut(s) 758, 2099
MroXI GAANNNNTTC 3 cut(s) 1330, 1359, 1621
MseI TTAA 5 cut(s) 195, 327, 1197, 1547, 1611
MslI CAYNNNNRTG 8 cut(s) 569, 789, 1529, 1574, 1678, 1813, 1971, 2302
MspA1I CMGCKG 2 cut(s) 63, 170
MspI CCGG 4 cut(s) 759, 1730, 2100, 2251
MspR9I CCNGG 6 cut(s) 527, 1096, 1208, 1641, 1731, 1929
MunI CAATTG 2 cut(s) 1278, 1379
Mva1269I GAATGC 2 cut(s) 1472, 2309
MvaI CCWGG 5 cut(s) 527, 1096, 1208, 1641, 1929
MvnI CGCG 1 cut(s) 2125
MwoI GCNNNNNNNGC 4 cut(s) 764, 830, 978, 2105
NaeI GCCGGC 2 cut(s) 760, 2101
NciI CCSGG 1 cut(s) 1731
NcoI CCATGG 3 cut(s) 564, 1966, 2229
NdeI CATATG 1 cut(s) 2284
NgoMIV GCCGGC 2 cut(s) 758, 2099
NlaIV GGNNCC 2 cut(s) 1632, 2291
NmeAIII GCCGAG 1 cut(s) 2153
NmuCI GTSAC 4 cut(s) 709, 895, 1666, 2050
NsbI TGCGCA 1 cut(s) 2308
NspI RCATGY 1 cut(s) 1777
NspV TTCGAA 2 cut(s) 256, 351
OliI CACNNNNGTG 1 cut(s) 789
PaeR7I CTCGAG 1 cut(s) 2033
PagI TCATGA 2 cut(s) 100, 1135
PceI AGGCCT 2 cut(s) 767, 2108
PctI GAATGC 2 cut(s) 1472, 2309
PdiI GCCGGC 2 cut(s) 760, 2101
PdmI GAANNNNTTC 3 cut(s) 1330, 1359, 1621
PfeI GAWTC 4 cut(s) 219, 1369, 1892, 2269
PflFI GACNNNGTC 2 cut(s) 1120, 1870
PinAI ACCGGT 1 cut(s) 2250
PleI GAGTC 3 cut(s) 1315, 2219, 2242
PpsI GAGTC 3 cut(s) 1315, 2219, 2242
PpuMI RGGWCCY 1 cut(s) 984
PshAI GACNNNNGTC 2 cut(s) 707, 2048
Psp5II RGGWCCY 1 cut(s) 984
Psp6I CCWGG 5 cut(s) 525, 1094, 1206, 1639, 1927
PspGI CCWGG 5 cut(s) 525, 1094, 1206, 1639, 1927
PspN4I GGNNCC 2 cut(s) 1632, 2291
PspPI GGNCC 5 cut(s) 779, 984, 1727, 1818, 2187
PspPPI RGGWCCY 1 cut(s) 984
PsuI RGATCY 6 cut(s) 370, 587, 627, 1141, 1989, 2029
PsyI GACNNNGTC 2 cut(s) 1120, 1870
PvuII CAGCTG 1 cut(s) 170
RsaI GTAC 6 cut(s) 145, 636, 1061, 1273, 1429, 1778
RsaNI GTAC 6 cut(s) 144, 635, 1060, 1272, 1428, 1777
RseI CAYNNNNRTG 8 cut(s) 569, 789, 1529, 1574, 1678, 1813, 1971, 2302
SaqAI TTAA 5 cut(s) 195, 327, 1197, 1547, 1611
Sau96I GGNCC 5 cut(s) 779, 984, 1727, 1818, 2187
SchI GAGTC 3 cut(s) 1315, 2219, 2243
ScrFI CCNGG 6 cut(s) 527, 1096, 1208, 1641, 1731, 1929
SduI GDGCHC 3 cut(s) 1095, 1763, 2292
SfaNI GCATC 2 cut(s) 880, 1653
SfcI CTRYAG 3 cut(s) 357, 769, 2110
Sfr274I CTCGAG 1 cut(s) 2033
SfuI TTCGAA 2 cut(s) 256, 351
SinI GGWCC 2 cut(s) 984, 1727
SlaI CTCGAG 1 cut(s) 2033
SmiMI CAYNNNNRTG 8 cut(s) 569, 789, 1529, 1574, 1678, 1813, 1971, 2302
SmlI CTYRAG 2 cut(s) 374, 2033
SmoI CTYRAG 2 cut(s) 374, 2033
Sse9I AATT 8 cut(s) 242, 266, 328, 480, 1002, 1278, 1379, 1479
SseBI AGGCCT 2 cut(s) 767, 2108
SsiI CCGC 9 cut(s) 63, 84, 676, 740, 1467, 1797, 1833, 2081, 2123
SspI AATATT 2 cut(s) 1622, 1737
SspMI CTAG 7 cut(s) 725, 1167, 1173, 1227, 1307, 1656, 2066
StuI AGGCCT 2 cut(s) 767, 2108
StyD4I CCNGG 6 cut(s) 525, 1094, 1206, 1639, 1729, 1927
StyI CCWWGG 3 cut(s) 564, 1966, 2229
TaaI ACNGT 6 cut(s) 753, 901, 1432, 1758, 1828, 2094
TaiI ACGT 4 cut(s) 277, 711, 1772, 2052
TaqI TCGA 8 cut(s) 34, 256, 351, 855, 1089, 1324, 1811, 2034
TasI AATT 8 cut(s) 242, 266, 328, 480, 1002, 1278, 1379, 1479
TatI WGTACW 2 cut(s) 1271, 1427
TauI GCSGC 3 cut(s) 678, 1469, 1835
TfiI GAWTC 4 cut(s) 219, 1369, 1892, 2269
Tru1I TTAA 5 cut(s) 195, 327, 1197, 1547, 1611
Tru9I TTAA 5 cut(s) 195, 327, 1197, 1547, 1611
TscAI CASTG 4 cut(s) 1671, 1763, 1831, 1865
TseFI GTSAC 4 cut(s) 709, 895, 1666, 2050
TseI GCWGC 8 cut(s) 60, 794, 911, 939, 1310, 1469, 1976, 2135
Tsp45I GTSAC 4 cut(s) 709, 895, 1666, 2050
TspGWI ACGGA 2 cut(s) 715, 2056
TspRI CASTG 4 cut(s) 1671, 1763, 1831, 1865
Tth111I GACNNNGTC 2 cut(s) 1120, 1870
VpaK11BI GGWCC 2 cut(s) 984, 1727
XagI CCTNNNNNAGG 3 cut(s) 786, 951, 1638
XapI RAATTY 2 cut(s) 266, 480
XceI RCATGY 1 cut(s) 1777
XcmI CCANNNNNNNNNTGG 1 cut(s) 1812
XhoI CTCGAG 1 cut(s) 2033
XmiI GTMKAC 1 cut(s) 1874
XmnI GAANNNNTTC 3 cut(s) 1330, 1359, 1621
XspI CTAG 7 cut(s) 725, 1167, 1173, 1227, 1307, 1656, 2066
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.