protein ubiquitination
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| PGG | PF13962 | 512 - 624 | 1.3e-23 | Domain of unknown function |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1251 |
| AarI | CACCTGC | 1 cut(s) | 434 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 479 |
| Acc36I | ACCTGC | 1 cut(s) | 434 |
| AccBSI | CCGCTC | 1 cut(s) | 541 |
| AccII | CGCG | 4 cut(s) | 155, 471, 1486, 1488 |
| AclWI | GGATC | 6 cut(s) | 90, 449, 460, 548, 805, 1455 |
| AcoI | YGGCCR | 2 cut(s) | 642, 1833 |
| AcsI | RAATTY | 4 cut(s) | 728, 1026, 1094, 1652 |
| AcuI | CTGAAG | 1 cut(s) | 1707 |
| AfaI | GTAC | 3 cut(s) | 288, 694, 1564 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 205, 640, 1177 |
| AflII | CTTAAG | 1 cut(s) | 709 |
| AgsI | TTSAA | 8 cut(s) | 26, 679, 1025, 1217, 1270, 1417, 1454, 1660 |
| AjiI | CACGTC | 1 cut(s) | 1752 |
| Alw21I | GWGCWC | 1 cut(s) | 1579 |
| Alw26I | GTCTC | 1 cut(s) | 968 |
| AlwI | GGATC | 6 cut(s) | 90, 449, 460, 548, 805, 1455 |
| Ama87I | CYCGRG | 2 cut(s) | 203, 459 |
| AoxI | GGCC | 2 cut(s) | 642, 1833 |
| ApeKI | GCWGC | 5 cut(s) | 1017, 1121, 1382, 1601, 1604 |
| ApoI | RAATTY | 4 cut(s) | 728, 1026, 1094, 1652 |
| AseI | ATTAAT | 1 cut(s) | 309 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1773 |
| AspLEI | GCGC | 2 cut(s) | 356, 1488 |
| AsuC2I | CCSGG | 1 cut(s) | 1620 |
| AsuHPI | GGTGA | 5 cut(s) | 19, 44, 101, 458, 1341 |
| AvaI | CYCGRG | 2 cut(s) | 203, 459 |
| BalI | TGGCCA | 1 cut(s) | 644 |
| BbsI | GAAGAC | 2 cut(s) | 14, 1281 |
| Bbv12I | GWGCWC | 1 cut(s) | 1579 |
| BbvI | GCAGC | 5 cut(s) | 1029, 1133, 1394, 1588, 1616 |
| BccI | CCATC | 7 cut(s) | 86, 92, 235, 383, 872, 1360, 1837 |
| BceAI | ACGGC | 3 cut(s) | 253, 514, 1122 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 995, 1029, 1454, 1488 |
| BcnI | CCSGG | 1 cut(s) | 1620 |
| BcoDI | GTCTC | 1 cut(s) | 968 |
| BfaI | CTAG | 1 cut(s) | 1031 |
| BfmI | CTRYAG | 1 cut(s) | 1602 |
| BfrI | CTTAAG | 1 cut(s) | 709 |
| BfuAI | ACCTGC | 1 cut(s) | 434 |
| BisI | GCNGC | 7 cut(s) | 153, 1018, 1122, 1383, 1602, 1605, 1836 |
| BlpI | GCTNAGC | 1 cut(s) | 39 |
| BlsI | GCNGC | 7 cut(s) | 154, 1019, 1123, 1384, 1603, 1606, 1837 |
| Bme1390I | CCNGG | 1 cut(s) | 1620 |
| BmeT110I | CYCGRG | 2 cut(s) | 203, 459 |
| BmgBI | CACGTC | 1 cut(s) | 1752 |
| BmrFI | CCNGG | 1 cut(s) | 1620 |
| BmsI | GCATC | 4 cut(s) | 25, 256, 1938, 2044 |
| BpiI | GAAGAC | 2 cut(s) | 14, 1281 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1420, 1452 |
| Bpu10I | CCTNAGC | 1 cut(s) | 973 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 39 |
| BpuMI | CCSGG | 1 cut(s) | 1620 |
| BsaAI | YACGTR | 1 cut(s) | 1376 |
| BsaBI | GATNNNNATC | 1 cut(s) | 453 |
| BsaI | GGTCTC | 1 cut(s) | 968 |
| BsaJI | CCNNGG | 3 cut(s) | 204, 1830, 2032 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 87, 117 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 205, 640, 1177 |
| Bse118I | RCCGGY | 1 cut(s) | 720 |
| Bse1I | ACTGG | 3 cut(s) | 516, 1156, 1924 |
| Bse3DI | GCAATG | 2 cut(s) | 645, 839 |
| Bse8I | GATNNNNATC | 1 cut(s) | 453 |
| BseDI | CCNNGG | 3 cut(s) | 204, 1830, 2032 |
| BseGI | GGATG | 1 cut(s) | 1953 |
| BseJI | GATNNNNATC | 1 cut(s) | 453 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 205, 640, 1177 |
| BseMI | GCAATG | 2 cut(s) | 645, 839 |
| BseMII | CTCAG | 4 cut(s) | 53, 595, 947, 987 |
| BseNI | ACTGG | 3 cut(s) | 516, 1156, 1924 |
| BseRI | GAGGAG | 1 cut(s) | 765 |
| BseXI | GCAGC | 5 cut(s) | 1029, 1133, 1394, 1588, 1616 |
| BsgI | GTGCAG | 2 cut(s) | 1341, 1401 |
| Bsh1236I | CGCG | 4 cut(s) | 155, 471, 1486, 1488 |
| Bsh1285I | CGRYCG | 1 cut(s) | 399 |
| BshFI | GGCC | 2 cut(s) | 644, 1835 |
| BsiEI | CGRYCG | 1 cut(s) | 399 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1579 |
| BsiHKCI | CYCGRG | 2 cut(s) | 203, 459 |
| BsiSI | CCGG | 2 cut(s) | 721, 1620 |
| BslFI | GGGAC | 2 cut(s) | 350, 1353 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 205, 640, 1177 |
| BsmAI | GTCTC | 1 cut(s) | 968 |
| BsmFI | GGGAC | 2 cut(s) | 350, 1353 |
| BsmI | GAATGC | 2 cut(s) | 704, 1607 |
| BsnI | GGCC | 2 cut(s) | 644, 1835 |
| Bso31I | GGTCTC | 1 cut(s) | 968 |
| BsoBI | CYCGRG | 2 cut(s) | 203, 459 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1579 |
| Bsp1407I | TGTACA | 2 cut(s) | 692, 1562 |
| Bsp143I | GATC | 8 cut(s) | 82, 340, 454, 465, 503, 553, 797, 1447 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 39 |
| BspANI | GGCC | 2 cut(s) | 644, 1835 |
| BspCNI | CTCAG | 4 cut(s) | 52, 594, 948, 986 |
| BspFNI | CGCG | 4 cut(s) | 155, 471, 1486, 1488 |
| BspHI | TCATGA | 1 cut(s) | 1293 |
| BspMAI | CTGCAG | 1 cut(s) | 1606 |
| BspMI | ACCTGC | 1 cut(s) | 434 |
| BspPI | GGATC | 6 cut(s) | 90, 449, 460, 548, 805, 1455 |
| BspTI | CTTAAG | 1 cut(s) | 709 |
| BspTNI | GGTCTC | 1 cut(s) | 968 |
| BsrBI | CCGCTC | 1 cut(s) | 541 |
| BsrDI | GCAATG | 2 cut(s) | 645, 839 |
| BsrFI | RCCGGY | 1 cut(s) | 720 |
| BsrGI | TGTACA | 2 cut(s) | 692, 1562 |
| BsrI | ACTGG | 3 cut(s) | 516, 1156, 1924 |
| BssAI | RCCGGY | 1 cut(s) | 720 |
| BssECI | CCNNGG | 3 cut(s) | 204, 1830, 2032 |
| BssMI | GATC | 8 cut(s) | 82, 340, 454, 465, 503, 553, 797, 1447 |
| BssT1I | CCWWGG | 1 cut(s) | 2032 |
| Bst4CI | ACNGT | 4 cut(s) | 113, 247, 397, 1567 |
| Bst6I | CTCTTC | 1 cut(s) | 2032 |
| BstAFI | CTTAAG | 1 cut(s) | 709 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 266, 1477 |
| BstAUI | TGTACA | 2 cut(s) | 692, 1562 |
| BstBAI | YACGTR | 1 cut(s) | 1376 |
| BstC8I | GCNNGC | 4 cut(s) | 613, 722, 846, 1473 |
| BstDEI | CTNAG | 5 cut(s) | 39, 581, 956, 973, 1500 |
| BstDSI | CCRYGG | 1 cut(s) | 1830 |
| BstF5I | GGATG | 1 cut(s) | 1953 |
| BstFNI | CGCG | 4 cut(s) | 155, 471, 1486, 1488 |
| BstHHI | GCGC | 2 cut(s) | 356, 1488 |
| BstKTI | GATC | 8 cut(s) | 85, 343, 457, 468, 506, 556, 800, 1450 |
| BstMAI | GTCTC | 1 cut(s) | 968 |
| BstMBI | GATC | 8 cut(s) | 82, 340, 454, 465, 503, 553, 797, 1447 |
| BstMCI | CGRYCG | 1 cut(s) | 399 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 266, 1477, 1613 |
| BstNSI | RCATGY | 6 cut(s) | 18, 693, 848, 1042, 1475, 1575 |
| BstSCI | CCNGG | 1 cut(s) | 1618 |
| BstSFI | CTRYAG | 1 cut(s) | 1602 |
| BstUI | CGCG | 4 cut(s) | 155, 471, 1486, 1488 |
| BstV1I | GCAGC | 5 cut(s) | 1029, 1133, 1394, 1588, 1616 |
| BstV2I | GAAGAC | 2 cut(s) | 14, 1281 |
| BstX2I | RGATCY | 2 cut(s) | 797, 1447 |
| BstYI | RGATCY | 2 cut(s) | 797, 1447 |
| BsuRI | GGCC | 2 cut(s) | 644, 1835 |
| BtgI | CCRYGG | 1 cut(s) | 1830 |
| BtrI | CACGTC | 1 cut(s) | 1752 |
| BtsCI | GGATG | 1 cut(s) | 1953 |
| BtsIMutI | CAGTG | 1 cut(s) | 1917 |
| BveI | ACCTGC | 1 cut(s) | 434 |
| Cac8I | GCNNGC | 4 cut(s) | 613, 722, 846, 1473 |
| CciI | TCATGA | 1 cut(s) | 1293 |
| CfoI | GCGC | 2 cut(s) | 356, 1488 |
| Cfr10I | RCCGGY | 1 cut(s) | 720 |
| CseI | GACGC | 1 cut(s) | 1703 |
| Csp6I | GTAC | 3 cut(s) | 287, 693, 1563 |
| CviQI | GTAC | 3 cut(s) | 287, 693, 1563 |
| DdeI | CTNAG | 5 cut(s) | 39, 581, 956, 973, 1500 |
| DpnI | GATC | 8 cut(s) | 84, 342, 456, 467, 505, 555, 799, 1449 |
| DpnII | GATC | 8 cut(s) | 82, 340, 454, 465, 503, 553, 797, 1447 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 479 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 479 |
| EaeI | YGGCCR | 2 cut(s) | 642, 1833 |
| Eam1104I | CTCTTC | 1 cut(s) | 2032 |
| EarI | CTCTTC | 1 cut(s) | 2032 |
| EciI | GGCGGA | 1 cut(s) | 1849 |
| Eco130I | CCWWGG | 1 cut(s) | 2032 |
| Eco31I | GGTCTC | 1 cut(s) | 968 |
| Eco57I | CTGAAG | 1 cut(s) | 1707 |
| Eco88I | CYCGRG | 2 cut(s) | 203, 459 |
| EcoRI | GAATTC | 1 cut(s) | 1094 |
| EcoT14I | CCWWGG | 1 cut(s) | 2032 |
| ErhI | CCWWGG | 1 cut(s) | 2032 |
| FaqI | GGGAC | 2 cut(s) | 350, 1353 |
| FauI | CCCGC | 1 cut(s) | 267 |
| FauNDI | CATATG | 1 cut(s) | 1332 |
| Fnu4HI | GCNGC | 7 cut(s) | 153, 1018, 1122, 1383, 1602, 1605, 1836 |
| FokI | GGATG | 1 cut(s) | 1960 |
| Fsp4HI | GCNGC | 7 cut(s) | 153, 1018, 1122, 1383, 1602, 1605, 1836 |
| FspBI | CTAG | 1 cut(s) | 1031 |
| GlaI | GCGC | 2 cut(s) | 355, 1487 |
| GluI | GCNGC | 7 cut(s) | 153, 1018, 1122, 1383, 1602, 1605, 1836 |
| HaeIII | GGCC | 2 cut(s) | 644, 1835 |
| HapII | CCGG | 2 cut(s) | 721, 1620 |
| HgaI | GACGC | 1 cut(s) | 1703 |
| HhaI | GCGC | 2 cut(s) | 356, 1488 |
| Hin6I | GCGC | 2 cut(s) | 354, 1486 |
| HinP1I | GCGC | 2 cut(s) | 354, 1486 |
| HindIII | AAGCTT | 1 cut(s) | 637 |
| HinfI | GANTC | 2 cut(s) | 979, 1886 |
| HpaII | CCGG | 2 cut(s) | 721, 1620 |
| HphI | GGTGA | 5 cut(s) | 19, 44, 101, 458, 1341 |
| Hpy166II | GTNNAC | 3 cut(s) | 695, 1168, 1462 |
| Hpy188I | TCNGA | 3 cut(s) | 232, 485, 664 |
| Hpy188III | TCNNGA | 7 cut(s) | 380, 625, 784, 1294, 1442, 1451, 1657 |
| Hpy8I | GTNNAC | 3 cut(s) | 695, 1168, 1462 |
| Hpy99I | CGWCG | 1 cut(s) | 239 |
| HpyAV | CCTTC | 4 cut(s) | 285, 708, 788, 1659 |
| HpyCH4III | ACNGT | 4 cut(s) | 113, 247, 397, 1567 |
| HpyCH4IV | ACGT | 5 cut(s) | 861, 924, 1375, 1751, 1756 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 266, 1477, 1613 |
| HpyF3I | CTNAG | 5 cut(s) | 39, 581, 956, 973, 1500 |
| HpySE526I | ACGT | 5 cut(s) | 861, 924, 1375, 1751, 1756 |
| HspAI | GCGC | 2 cut(s) | 354, 1486 |
| KroI | GCCGGC | 1 cut(s) | 720 |
| KroNI | GCCGGC | 1 cut(s) | 722 |
| Kzo9I | GATC | 8 cut(s) | 82, 340, 454, 465, 503, 553, 797, 1447 |
| LmnI | GCTCC | 4 cut(s) | 229, 433, 485, 1621 |
| Lsp1109I | GCAGC | 5 cut(s) | 1029, 1133, 1394, 1588, 1616 |
| LweI | GCATC | 4 cut(s) | 25, 256, 1938, 2044 |
| MaeI | CTAG | 1 cut(s) | 1031 |
| MaeII | ACGT | 5 cut(s) | 861, 924, 1375, 1751, 1756 |
| MaeIII | GTNAC | 5 cut(s) | 7, 532, 1076, 1585, 1752 |
| MalI | GATC | 8 cut(s) | 84, 342, 456, 467, 505, 555, 799, 1449 |
| MbiI | CCGCTC | 1 cut(s) | 541 |
| MboI | GATC | 8 cut(s) | 82, 340, 454, 465, 503, 553, 797, 1447 |
| MfeI | CAATTG | 1 cut(s) | 1929 |
| MflI | RGATCY | 2 cut(s) | 797, 1447 |
| MhlI | GDGCHC | 1 cut(s) | 1579 |
| MlsI | TGGCCA | 1 cut(s) | 644 |
| MluNI | TGGCCA | 1 cut(s) | 644 |
| MlyI | GAGTC | 1 cut(s) | 1880 |
| MmeI | TCCRAC | 3 cut(s) | 141, 463, 1404 |
| Mox20I | TGGCCA | 1 cut(s) | 644 |
| MroNI | GCCGGC | 1 cut(s) | 720 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1773 |
| MscI | TGGCCA | 1 cut(s) | 644 |
| MseI | TTAA | 7 cut(s) | 105, 192, 309, 620, 710, 1814, 2027 |
| MslI | CAYNNNNRTG | 3 cut(s) | 939, 1298, 1942 |
| Msp20I | TGGCCA | 1 cut(s) | 644 |
| MspCI | CTTAAG | 1 cut(s) | 709 |
| MspI | CCGG | 2 cut(s) | 721, 1620 |
| MspR9I | CCNGG | 1 cut(s) | 1620 |
| MunI | CAATTG | 1 cut(s) | 1929 |
| Mva1269I | GAATGC | 2 cut(s) | 704, 1607 |
| MvnI | CGCG | 4 cut(s) | 155, 471, 1486, 1488 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 266, 1477, 1613 |
| NaeI | GCCGGC | 1 cut(s) | 722 |
| NciI | CCSGG | 1 cut(s) | 1620 |
| NdeI | CATATG | 1 cut(s) | 1332 |
| NdeII | GATC | 8 cut(s) | 82, 340, 454, 465, 503, 553, 797, 1447 |
| NgoMIV | GCCGGC | 1 cut(s) | 720 |
| NmuCI | GTSAC | 4 cut(s) | 7, 532, 1076, 1752 |
| NspI | RCATGY | 6 cut(s) | 18, 693, 848, 1042, 1475, 1575 |
| PaeI | GCATGC | 2 cut(s) | 848, 1475 |
| PagI | TCATGA | 1 cut(s) | 1293 |
| PaqCI | CACCTGC | 1 cut(s) | 434 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 991 |
| PctI | GAATGC | 2 cut(s) | 704, 1607 |
| PdiI | GCCGGC | 1 cut(s) | 722 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1773 |
| PfeI | GAWTC | 1 cut(s) | 979 |
| PkrI | GCNGC | 7 cut(s) | 154, 1019, 1123, 1384, 1603, 1606, 1837 |
| PleI | GAGTC | 1 cut(s) | 1880 |
| PpsI | GAGTC | 1 cut(s) | 1880 |
| Ppu21I | YACGTR | 1 cut(s) | 1376 |
| PshBI | ATTAAT | 1 cut(s) | 309 |
| PsiI | TTATAA | 1 cut(s) | 1251 |
| PstI | CTGCAG | 1 cut(s) | 1606 |
| PsuI | RGATCY | 2 cut(s) | 797, 1447 |
| RsaI | GTAC | 3 cut(s) | 288, 694, 1564 |
| RsaNI | GTAC | 3 cut(s) | 287, 693, 1563 |
| RseI | CAYNNNNRTG | 3 cut(s) | 939, 1298, 1942 |
| SaqAI | TTAA | 7 cut(s) | 105, 192, 309, 620, 710, 1814, 2027 |
| SatI | GCNGC | 7 cut(s) | 153, 1018, 1122, 1383, 1602, 1605, 1836 |
| Sau3AI | GATC | 8 cut(s) | 82, 340, 454, 465, 503, 553, 797, 1447 |
| SchI | GAGTC | 1 cut(s) | 1880 |
| ScrFI | CCNGG | 1 cut(s) | 1620 |
| SduI | GDGCHC | 1 cut(s) | 1579 |
| SfaNI | GCATC | 4 cut(s) | 25, 256, 1938, 2044 |
| SfcI | CTRYAG | 1 cut(s) | 1602 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 939, 1298, 1942 |
| SmlI | CTYRAG | 1 cut(s) | 709 |
| SmoI | CTYRAG | 1 cut(s) | 709 |
| SphI | GCATGC | 2 cut(s) | 848, 1475 |
| SspMI | CTAG | 1 cut(s) | 1031 |
| StyD4I | CCNGG | 1 cut(s) | 1618 |
| StyI | CCWWGG | 1 cut(s) | 2032 |
| TaaI | ACNGT | 4 cut(s) | 113, 247, 397, 1567 |
| TaiI | ACGT | 5 cut(s) | 864, 927, 1378, 1754, 1759 |
| TaqI | TCGA | 5 cut(s) | 264, 399, 453, 994, 1792 |
| TatI | WGTACW | 2 cut(s) | 692, 1562 |
| TauI | GCSGC | 2 cut(s) | 155, 1838 |
| TfiI | GAWTC | 1 cut(s) | 979 |
| Tru1I | TTAA | 7 cut(s) | 105, 192, 309, 620, 710, 1814, 2027 |
| Tru9I | TTAA | 7 cut(s) | 105, 192, 309, 620, 710, 1814, 2027 |
| TscAI | CASTG | 1 cut(s) | 1924 |
| TseFI | GTSAC | 4 cut(s) | 7, 532, 1076, 1752 |
| TseI | GCWGC | 5 cut(s) | 1017, 1121, 1382, 1601, 1604 |
| Tsp45I | GTSAC | 4 cut(s) | 7, 532, 1076, 1752 |
| TspDTI | ATGAA | 9 cut(s) | 242, 951, 971, 1013, 1082, 1209, 1524, 1556, 1647 |
| TspGWI | ACGGA | 1 cut(s) | 1819 |
| TspRI | CASTG | 1 cut(s) | 1924 |
| Vha464I | CTTAAG | 1 cut(s) | 709 |
| VspI | ATTAAT | 1 cut(s) | 309 |
| XapI | RAATTY | 4 cut(s) | 728, 1026, 1094, 1652 |
| XceI | RCATGY | 6 cut(s) | 18, 693, 848, 1042, 1475, 1575 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1773 |
| XspI | CTAG | 1 cut(s) | 1031 |