protein ubiquitination
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 933 |
| AciI | CCGC | 4 cut(s) | 78, 604, 916, 952 |
| AclWI | GGATC | 2 cut(s) | 464, 482 |
| AcsI | RAATTY | 4 cut(s) | 279, 710, 970, 1024 |
| AcuI | CTGAAG | 3 cut(s) | 114, 406, 1134 |
| AfaI | GTAC | 3 cut(s) | 135, 982, 1119 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 1018 |
| AgsI | TTSAA | 6 cut(s) | 119, 522, 710, 911, 1048, 1127 |
| AjnI | CCWGG | 1 cut(s) | 260 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 956, 988 |
| AleI | CACNNNNGTG | 1 cut(s) | 594 |
| AluBI | AGCT | 3 cut(s) | 797, 845, 1087 |
| AluI | AGCT | 3 cut(s) | 797, 845, 1087 |
| Alw26I | GTCTC | 2 cut(s) | 251, 331 |
| AlwI | GGATC | 2 cut(s) | 464, 482 |
| AoxI | GGCC | 2 cut(s) | 263, 271 |
| ApeKI | GCWGC | 3 cut(s) | 83, 842, 1087 |
| ApoI | RAATTY | 4 cut(s) | 279, 710, 970, 1024 |
| AspS9I | GGNCC | 1 cut(s) | 272 |
| AsuHPI | GGTGA | 3 cut(s) | 130, 740, 1023 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 443, 475 |
| BauI | CACGAG | 1 cut(s) | 637 |
| BbvI | GCAGC | 3 cut(s) | 95, 854, 1074 |
| BccI | CCATC | 4 cut(s) | 195, 263, 536, 949 |
| BciT130I | CCWGG | 1 cut(s) | 262 |
| BclI | TGATCA | 2 cut(s) | 535, 690 |
| BcoDI | GTCTC | 2 cut(s) | 251, 331 |
| BfaI | CTAG | 3 cut(s) | 105, 363, 563 |
| BfmI | CTRYAG | 1 cut(s) | 798 |
| BglII | AGATCT | 1 cut(s) | 13 |
| BisI | GCNGC | 4 cut(s) | 84, 843, 916, 1088 |
| BlsI | GCNGC | 4 cut(s) | 85, 844, 917, 1089 |
| Bme1390I | CCNGG | 1 cut(s) | 262 |
| BmgT120I | GGNCC | 1 cut(s) | 272 |
| BmrFI | CCNGG | 1 cut(s) | 262 |
| BmsI | GCATC | 3 cut(s) | 156, 425, 732 |
| BsaI | GGTCTC | 1 cut(s) | 251 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 1018 |
| Bse1I | ACTGG | 4 cut(s) | 173, 213, 612, 1121 |
| Bse3DI | GCAATG | 2 cut(s) | 770, 1097 |
| BseBI | CCWGG | 1 cut(s) | 262 |
| BseGI | GGATG | 4 cut(s) | 416, 880, 960, 983 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 1018 |
| BseMI | GCAATG | 2 cut(s) | 770, 1097 |
| BseMII | CTCAG | 2 cut(s) | 326, 633 |
| BseNI | ACTGG | 4 cut(s) | 173, 213, 612, 1121 |
| BseRI | GAGGAG | 1 cut(s) | 147 |
| BseXI | GCAGC | 3 cut(s) | 95, 854, 1074 |
| BsgI | GTGCAG | 1 cut(s) | 861 |
| BshFI | GGCC | 2 cut(s) | 265, 273 |
| BslFI | GGGAC | 1 cut(s) | 341 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 1018 |
| BsmAI | GTCTC | 2 cut(s) | 251, 331 |
| BsmBI | CGTCTC | 1 cut(s) | 331 |
| BsmFI | GGGAC | 1 cut(s) | 341 |
| BsmI | GAATGC | 2 cut(s) | 409, 917 |
| BsnI | GGCC | 2 cut(s) | 265, 273 |
| Bso31I | GGTCTC | 1 cut(s) | 251 |
| Bsp143I | GATC | 5 cut(s) | 13, 456, 487, 535, 690 |
| BspACI | CCGC | 4 cut(s) | 78, 604, 916, 952 |
| BspANI | GGCC | 2 cut(s) | 265, 273 |
| BspCNI | CTCAG | 2 cut(s) | 327, 632 |
| BspHI | TCATGA | 1 cut(s) | 499 |
| BspPI | GGATC | 2 cut(s) | 464, 482 |
| BspTNI | GGTCTC | 1 cut(s) | 251 |
| BsrDI | GCAATG | 2 cut(s) | 770, 1097 |
| BsrI | ACTGG | 4 cut(s) | 173, 213, 612, 1121 |
| BssMI | GATC | 5 cut(s) | 13, 456, 487, 535, 690 |
| BssSI | CACGAG | 1 cut(s) | 637 |
| Bst2BI | CACGAG | 1 cut(s) | 637 |
| Bst2UI | CCWGG | 1 cut(s) | 262 |
| Bst4CI | ACNGT | 2 cut(s) | 32, 467 |
| BstC8I | GCNNGC | 1 cut(s) | 214 |
| BstDEI | CTNAG | 2 cut(s) | 335, 619 |
| BstF5I | GGATG | 4 cut(s) | 416, 880, 960, 983 |
| BstKTI | GATC | 5 cut(s) | 16, 459, 490, 538, 693 |
| BstMAI | GTCTC | 2 cut(s) | 251, 331 |
| BstMBI | GATC | 5 cut(s) | 13, 456, 487, 535, 690 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 89, 1084 |
| BstNI | CCWGG | 1 cut(s) | 262 |
| BstSCI | CCNGG | 1 cut(s) | 260 |
| BstSFI | CTRYAG | 1 cut(s) | 798 |
| BstV1I | GCAGC | 3 cut(s) | 95, 854, 1074 |
| BstX2I | RGATCY | 2 cut(s) | 13, 456 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 593 |
| BstYI | RGATCY | 2 cut(s) | 13, 456 |
| BsuRI | GGCC | 2 cut(s) | 265, 273 |
| BtsCI | GGATG | 4 cut(s) | 416, 880, 960, 983 |
| BtsIMutI | CAGTG | 2 cut(s) | 430, 825 |
| Cac8I | GCNNGC | 1 cut(s) | 214 |
| CciI | TCATGA | 1 cut(s) | 499 |
| Cfr13I | GGNCC | 1 cut(s) | 272 |
| Csp6I | GTAC | 3 cut(s) | 134, 981, 1118 |
| CviAII | CATG | 4 cut(s) | 239, 500, 899, 1133 |
| CviQI | GTAC | 3 cut(s) | 134, 981, 1118 |
| DdeI | CTNAG | 2 cut(s) | 335, 619 |
| DpnI | GATC | 5 cut(s) | 15, 458, 489, 537, 692 |
| DpnII | GATC | 5 cut(s) | 13, 456, 487, 535, 690 |
| EciI | GGCGGA | 2 cut(s) | 93, 619 |
| Eco147I | AGGCCT | 1 cut(s) | 265 |
| Eco31I | GGTCTC | 1 cut(s) | 251 |
| Eco32I | GATATC | 1 cut(s) | 507 |
| Eco57I | CTGAAG | 3 cut(s) | 114, 406, 1134 |
| EcoRII | CCWGG | 1 cut(s) | 260 |
| EcoRV | GATATC | 1 cut(s) | 507 |
| EcoT22I | ATGCAT | 2 cut(s) | 702, 1134 |
| Esp3I | CGTCTC | 1 cut(s) | 331 |
| FaeI | CATG | 4 cut(s) | 242, 503, 902, 1136 |
| FaqI | GGGAC | 1 cut(s) | 341 |
| FatI | CATG | 4 cut(s) | 238, 499, 898, 1132 |
| FauNDI | CATATG | 1 cut(s) | 1014 |
| FbaI | TGATCA | 2 cut(s) | 535, 690 |
| Fnu4HI | GCNGC | 4 cut(s) | 84, 843, 916, 1088 |
| FokI | GGATG | 4 cut(s) | 403, 887, 967, 990 |
| Fsp4HI | GCNGC | 4 cut(s) | 84, 843, 916, 1088 |
| FspBI | CTAG | 3 cut(s) | 105, 363, 563 |
| GluI | GCNGC | 4 cut(s) | 84, 843, 916, 1088 |
| HaeIII | GGCC | 2 cut(s) | 265, 273 |
| Hin1II | CATG | 4 cut(s) | 242, 503, 902, 1136 |
| HinfI | GANTC | 2 cut(s) | 663, 1136 |
| HphI | GGTGA | 3 cut(s) | 130, 740, 1023 |
| Hpy166II | GTNNAC | 1 cut(s) | 653 |
| Hpy188I | TCNGA | 1 cut(s) | 1153 |
| Hpy188III | TCNNGA | 5 cut(s) | 63, 500, 539, 637, 775 |
| Hpy8I | GTNNAC | 1 cut(s) | 653 |
| Hpy99I | CGWCG | 1 cut(s) | 377 |
| HpyAV | CCTTC | 3 cut(s) | 423, 430, 865 |
| HpyCH4III | ACNGT | 2 cut(s) | 32, 467 |
| HpyCH4IV | ACGT | 2 cut(s) | 340, 718 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 89, 1084 |
| HpyF3I | CTNAG | 2 cut(s) | 335, 619 |
| HpySE526I | ACGT | 2 cut(s) | 340, 718 |
| Hsp92II | CATG | 4 cut(s) | 242, 503, 902, 1136 |
| Ksp22I | TGATCA | 2 cut(s) | 535, 690 |
| Kzo9I | GATC | 5 cut(s) | 13, 456, 487, 535, 690 |
| LmnI | GCTCC | 2 cut(s) | 80, 1014 |
| Lsp1109I | GCAGC | 3 cut(s) | 95, 854, 1074 |
| LweI | GCATC | 3 cut(s) | 156, 425, 732 |
| MaeI | CTAG | 3 cut(s) | 105, 363, 563 |
| MaeII | ACGT | 2 cut(s) | 340, 718 |
| MaeIII | GTNAC | 5 cut(s) | 38, 229, 823, 1029, 1156 |
| MalI | GATC | 5 cut(s) | 15, 458, 489, 537, 692 |
| MboI | GATC | 5 cut(s) | 13, 456, 487, 535, 690 |
| MboII | GAAGA | 7 cut(s) | 20, 23, 107, 542, 578, 581, 897 |
| MfeI | CAATTG | 2 cut(s) | 55, 163 |
| MflI | RGATCY | 2 cut(s) | 13, 456 |
| MluCI | AATT | 8 cut(s) | 55, 163, 279, 686, 710, 970, 1024, 1043 |
| MmeI | TCCRAC | 1 cut(s) | 575 |
| MnlI | CCTC | 8 cut(s) | 165, 168, 175, 285, 623, 633, 800, 875 |
| Mph1103I | ATGCAT | 2 cut(s) | 702, 1134 |
| MseI | TTAA | 4 cut(s) | 297, 438, 1056, 1098 |
| MslI | CAYNNNNRTG | 2 cut(s) | 591, 594 |
| MspR9I | CCNGG | 1 cut(s) | 262 |
| MunI | CAATTG | 2 cut(s) | 55, 163 |
| Mva1269I | GAATGC | 2 cut(s) | 409, 917 |
| MvaI | CCWGG | 1 cut(s) | 262 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 89, 1084 |
| NdeI | CATATG | 1 cut(s) | 1014 |
| NdeII | GATC | 5 cut(s) | 13, 456, 487, 535, 690 |
| NlaIII | CATG | 4 cut(s) | 242, 503, 902, 1136 |
| NmuCI | GTSAC | 4 cut(s) | 229, 823, 1029, 1156 |
| NsiI | ATGCAT | 2 cut(s) | 702, 1134 |
| OliI | CACNNNNGTG | 1 cut(s) | 594 |
| PagI | TCATGA | 1 cut(s) | 499 |
| PceI | AGGCCT | 1 cut(s) | 265 |
| PctI | GAATGC | 2 cut(s) | 409, 917 |
| PfeI | GAWTC | 2 cut(s) | 663, 1136 |
| PkrI | GCNGC | 4 cut(s) | 85, 844, 917, 1089 |
| PsiI | TTATAA | 1 cut(s) | 933 |
| Psp6I | CCWGG | 1 cut(s) | 260 |
| PspGI | CCWGG | 1 cut(s) | 260 |
| PspPI | GGNCC | 1 cut(s) | 272 |
| PsuI | RGATCY | 2 cut(s) | 13, 456 |
| RsaI | GTAC | 3 cut(s) | 135, 982, 1119 |
| RsaNI | GTAC | 3 cut(s) | 134, 981, 1118 |
| RseI | CAYNNNNRTG | 2 cut(s) | 591, 594 |
| SaqAI | TTAA | 4 cut(s) | 297, 438, 1056, 1098 |
| SatI | GCNGC | 4 cut(s) | 84, 843, 916, 1088 |
| Sau3AI | GATC | 5 cut(s) | 13, 456, 487, 535, 690 |
| Sau96I | GGNCC | 1 cut(s) | 272 |
| ScrFI | CCNGG | 1 cut(s) | 262 |
| SfaNI | GCATC | 3 cut(s) | 156, 425, 732 |
| SfcI | CTRYAG | 1 cut(s) | 798 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 591, 594 |
| Sse9I | AATT | 8 cut(s) | 55, 163, 279, 686, 710, 970, 1024, 1043 |
| SseBI | AGGCCT | 1 cut(s) | 265 |
| SsiI | CCGC | 4 cut(s) | 78, 604, 916, 952 |
| SspI | AATATT | 1 cut(s) | 834 |
| SspMI | CTAG | 3 cut(s) | 105, 363, 563 |
| StuI | AGGCCT | 1 cut(s) | 265 |
| StyD4I | CCNGG | 1 cut(s) | 260 |
| TaaI | ACNGT | 2 cut(s) | 32, 467 |
| TaiI | ACGT | 2 cut(s) | 343, 721 |
| TaqI | TCGA | 3 cut(s) | 180, 793, 847 |
| TasI | AATT | 8 cut(s) | 55, 163, 279, 686, 710, 970, 1024, 1043 |
| TatI | WGTACW | 2 cut(s) | 133, 980 |
| TauI | GCSGC | 1 cut(s) | 918 |
| TfiI | GAWTC | 2 cut(s) | 663, 1136 |
| Tru1I | TTAA | 4 cut(s) | 297, 438, 1056, 1098 |
| Tru9I | TTAA | 4 cut(s) | 297, 438, 1056, 1098 |
| TscAI | CASTG | 2 cut(s) | 430, 832 |
| TseFI | GTSAC | 4 cut(s) | 229, 823, 1029, 1156 |
| TseI | GCWGC | 3 cut(s) | 83, 842, 1087 |
| Tsp45I | GTSAC | 4 cut(s) | 229, 823, 1029, 1156 |
| TspDTI | ATGAA | 7 cut(s) | 255, 693, 698, 844, 884, 887, 1149 |
| TspGWI | ACGGA | 3 cut(s) | 390, 485, 638 |
| TspRI | CASTG | 2 cut(s) | 430, 832 |
| XapI | RAATTY | 4 cut(s) | 279, 710, 970, 1024 |
| XspI | CTAG | 3 cut(s) | 105, 363, 563 |
| Zsp2I | ATGCAT | 2 cut(s) | 702, 1134 |