protein ubiquitination
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Ank_2 | PF12796 | 42 - 108 | 1.4e-06 | Ankyrin repeats (3 copies) |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 2 cut(s) | 239, 254 |
| AciI | CCGC | 2 cut(s) | 18, 232 |
| AclWI | GGATC | 2 cut(s) | 334, 347 |
| AfaI | GTAC | 3 cut(s) | 455, 514, 542 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 455, 563 |
| AgsI | TTSAA | 2 cut(s) | 89, 576 |
| AluBI | AGCT | 2 cut(s) | 143, 199 |
| AluI | AGCT | 2 cut(s) | 143, 199 |
| Alw26I | GTCTC | 1 cut(s) | 80 |
| AlwI | GGATC | 2 cut(s) | 334, 347 |
| ApeKI | GCWGC | 2 cut(s) | 155, 196 |
| AseI | ATTAAT | 1 cut(s) | 582 |
| AspS9I | GGNCC | 1 cut(s) | 458 |
| AsuHPI | GGTGA | 2 cut(s) | 64, 485 |
| AvaII | GGWCC | 1 cut(s) | 458 |
| BaeGI | GKGCMC | 1 cut(s) | 259 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 504, 532, 537, 565 |
| BamHI | GGATCC | 1 cut(s) | 339 |
| BanI | GGYRCC | 2 cut(s) | 239, 254 |
| BbsI | GAAGAC | 1 cut(s) | 482 |
| BbvI | GCAGC | 2 cut(s) | 167, 208 |
| BccI | CCATC | 1 cut(s) | 292 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 269, 303 |
| BcoDI | GTCTC | 1 cut(s) | 80 |
| BfmI | CTRYAG | 1 cut(s) | 325 |
| BisI | GCNGC | 2 cut(s) | 156, 197 |
| BlsI | GCNGC | 2 cut(s) | 157, 198 |
| Bme18I | GGWCC | 1 cut(s) | 458 |
| BmgT120I | GGNCC | 1 cut(s) | 458 |
| BmiI | GGNNCC | 4 cut(s) | 241, 256, 341, 460 |
| BmsI | GCATC | 3 cut(s) | 85, 167, 277 |
| BpiI | GAAGAC | 1 cut(s) | 482 |
| BsaAI | YACGTR | 2 cut(s) | 151, 516 |
| BsaJI | CCNNGG | 1 cut(s) | 463 |
| BsaWI | WCCGGW | 1 cut(s) | 208 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 455, 563 |
| Bse1I | ACTGG | 1 cut(s) | 368 |
| BseDI | CCNNGG | 1 cut(s) | 463 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 455, 563 |
| BseMII | CTCAG | 1 cut(s) | 519 |
| BseNI | ACTGG | 1 cut(s) | 368 |
| BseSI | GKGCMC | 1 cut(s) | 259 |
| BseXI | GCAGC | 2 cut(s) | 167, 208 |
| BsgI | GTGCAG | 1 cut(s) | 215 |
| Bsh1285I | CGRYCG | 1 cut(s) | 294 |
| BshNI | GGYRCC | 2 cut(s) | 239, 254 |
| BsiEI | CGRYCG | 1 cut(s) | 294 |
| BsiSI | CCGG | 1 cut(s) | 209 |
| BslFI | GGGAC | 2 cut(s) | 96, 444 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 455, 563 |
| BsmAI | GTCTC | 1 cut(s) | 80 |
| BsmFI | GGGAC | 2 cut(s) | 96, 444 |
| Bsp1286I | GDGCHC | 1 cut(s) | 259 |
| Bsp143I | GATC | 2 cut(s) | 291, 339 |
| Bsp19I | CCATGG | 1 cut(s) | 463 |
| BspACI | CCGC | 2 cut(s) | 18, 232 |
| BspCNI | CTCAG | 1 cut(s) | 520 |
| BspLI | GGNNCC | 4 cut(s) | 241, 256, 341, 460 |
| BspPI | GGATC | 2 cut(s) | 334, 347 |
| BspQI | GCTCTTC | 1 cut(s) | 150 |
| BspT107I | GGYRCC | 2 cut(s) | 239, 254 |
| BsrI | ACTGG | 1 cut(s) | 368 |
| BssECI | CCNNGG | 1 cut(s) | 463 |
| BssMI | GATC | 2 cut(s) | 291, 339 |
| BssT1I | CCWWGG | 1 cut(s) | 463 |
| Bst4CI | ACNGT | 4 cut(s) | 453, 458, 497, 558 |
| Bst6I | CTCTTC | 1 cut(s) | 150 |
| BstBAI | YACGTR | 2 cut(s) | 151, 516 |
| BstDEI | CTNAG | 1 cut(s) | 528 |
| BstDSI | CCRYGG | 1 cut(s) | 463 |
| BstKTI | GATC | 2 cut(s) | 294, 342 |
| BstMAI | GTCTC | 1 cut(s) | 80 |
| BstMBI | GATC | 2 cut(s) | 291, 339 |
| BstMCI | CGRYCG | 1 cut(s) | 294 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 104, 113 |
| BstNSI | RCATGY | 2 cut(s) | 173, 549 |
| BstSFI | CTRYAG | 1 cut(s) | 325 |
| BstSLI | GKGCMC | 1 cut(s) | 259 |
| BstSNI | TACGTA | 1 cut(s) | 516 |
| BstV1I | GCAGC | 2 cut(s) | 167, 208 |
| BstV2I | GAAGAC | 1 cut(s) | 482 |
| BstX2I | RGATCY | 1 cut(s) | 339 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 250, 470 |
| BstYI | RGATCY | 1 cut(s) | 339 |
| BtgI | CCRYGG | 1 cut(s) | 463 |
| Cfr13I | GGNCC | 1 cut(s) | 458 |
| Csp6I | GTAC | 3 cut(s) | 454, 513, 541 |
| CviAII | CATG | 5 cut(s) | 45, 170, 310, 464, 546 |
| CviJI | RGCY | 7 cut(s) | 123, 143, 199, 380, 468, 567, 600 |
| CviKI_1 | RGCY | 7 cut(s) | 123, 143, 199, 380, 468, 567, 600 |
| CviQI | GTAC | 3 cut(s) | 454, 513, 541 |
| DdeI | CTNAG | 1 cut(s) | 528 |
| DpnI | GATC | 2 cut(s) | 293, 341 |
| DpnII | GATC | 2 cut(s) | 291, 339 |
| Eam1104I | CTCTTC | 1 cut(s) | 150 |
| EarI | CTCTTC | 1 cut(s) | 150 |
| Eco105I | TACGTA | 1 cut(s) | 516 |
| Eco130I | CCWWGG | 1 cut(s) | 463 |
| Eco32I | GATATC | 1 cut(s) | 413 |
| Eco47I | GGWCC | 1 cut(s) | 458 |
| EcoRV | GATATC | 1 cut(s) | 413 |
| EcoT14I | CCWWGG | 1 cut(s) | 463 |
| ErhI | CCWWGG | 1 cut(s) | 463 |
| FaeI | CATG | 5 cut(s) | 48, 173, 313, 467, 549 |
| FaqI | GGGAC | 2 cut(s) | 96, 444 |
| FatI | CATG | 5 cut(s) | 44, 169, 309, 463, 545 |
| Fnu4HI | GCNGC | 2 cut(s) | 156, 197 |
| Fsp4HI | GCNGC | 2 cut(s) | 156, 197 |
| GluI | GCNGC | 2 cut(s) | 156, 197 |
| HapII | CCGG | 1 cut(s) | 209 |
| Hin1II | CATG | 5 cut(s) | 48, 173, 313, 467, 549 |
| HinfI | GANTC | 3 cut(s) | 73, 89, 364 |
| HpaII | CCGG | 1 cut(s) | 209 |
| HphI | GGTGA | 2 cut(s) | 64, 485 |
| Hpy188I | TCNGA | 3 cut(s) | 94, 501, 529 |
| Hpy188III | TCNNGA | 1 cut(s) | 295 |
| Hpy99I | CGWCG | 1 cut(s) | 562 |
| HpyAV | CCTTC | 1 cut(s) | 275 |
| HpyCH4III | ACNGT | 4 cut(s) | 453, 458, 497, 558 |
| HpyCH4IV | ACGT | 4 cut(s) | 41, 150, 269, 515 |
| HpyCH4V | TGCA | 4 cut(s) | 67, 175, 196, 273 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 104, 113 |
| HpyF3I | CTNAG | 1 cut(s) | 528 |
| HpySE526I | ACGT | 4 cut(s) | 41, 150, 269, 515 |
| Hsp92II | CATG | 5 cut(s) | 48, 173, 313, 467, 549 |
| Kzo9I | GATC | 2 cut(s) | 291, 339 |
| LguI | GCTCTTC | 1 cut(s) | 150 |
| LmnI | GCTCC | 2 cut(s) | 30, 390 |
| LpnPI | CCDG | 4 cut(s) | 64, 222, 381, 456 |
| Lsp1109I | GCAGC | 2 cut(s) | 167, 208 |
| LweI | GCATC | 3 cut(s) | 85, 167, 277 |
| MaeII | ACGT | 4 cut(s) | 41, 150, 269, 515 |
| MaeIII | GTNAC | 1 cut(s) | 424 |
| MalI | GATC | 2 cut(s) | 293, 341 |
| MboI | GATC | 2 cut(s) | 291, 339 |
| MboII | GAAGA | 4 cut(s) | 24, 137, 224, 482 |
| MflI | RGATCY | 1 cut(s) | 339 |
| MhlI | GDGCHC | 1 cut(s) | 259 |
| MluCI | AATT | 2 cut(s) | 188, 401 |
| MlyI | GAGTC | 1 cut(s) | 82 |
| MnlI | CCTC | 2 cut(s) | 370, 430 |
| MseI | TTAA | 5 cut(s) | 110, 443, 551, 582, 588 |
| MspI | CCGG | 1 cut(s) | 209 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 104, 113 |
| NcoI | CCATGG | 1 cut(s) | 463 |
| NdeII | GATC | 2 cut(s) | 291, 339 |
| NlaIII | CATG | 5 cut(s) | 48, 173, 313, 467, 549 |
| NlaIV | GGNNCC | 4 cut(s) | 241, 256, 341, 460 |
| NmuCI | GTSAC | 1 cut(s) | 424 |
| NspI | RCATGY | 2 cut(s) | 173, 549 |
| PciSI | GCTCTTC | 1 cut(s) | 150 |
| PfeI | GAWTC | 2 cut(s) | 89, 364 |
| PkrI | GCNGC | 2 cut(s) | 157, 198 |
| Ple19I | CGATCG | 1 cut(s) | 294 |
| PleI | GAGTC | 1 cut(s) | 81 |
| PpsI | GAGTC | 1 cut(s) | 81 |
| Ppu21I | YACGTR | 2 cut(s) | 151, 516 |
| PshBI | ATTAAT | 1 cut(s) | 582 |
| PspN4I | GGNNCC | 4 cut(s) | 241, 256, 341, 460 |
| PspPI | GGNCC | 1 cut(s) | 458 |
| PsuI | RGATCY | 1 cut(s) | 339 |
| PvuI | CGATCG | 1 cut(s) | 294 |
| RsaI | GTAC | 3 cut(s) | 455, 514, 542 |
| RsaNI | GTAC | 3 cut(s) | 454, 513, 541 |
| SapI | GCTCTTC | 1 cut(s) | 150 |
| SaqAI | TTAA | 5 cut(s) | 110, 443, 551, 582, 588 |
| SatI | GCNGC | 2 cut(s) | 156, 197 |
| Sau3AI | GATC | 2 cut(s) | 291, 339 |
| Sau96I | GGNCC | 1 cut(s) | 458 |
| SchI | GAGTC | 1 cut(s) | 82 |
| SduI | GDGCHC | 1 cut(s) | 259 |
| SetI | ASST | 9 cut(s) | 44, 145, 153, 201, 250, 272, 279, 441, 518 |
| SfaNI | GCATC | 3 cut(s) | 85, 167, 277 |
| SfcI | CTRYAG | 1 cut(s) | 325 |
| SinI | GGWCC | 1 cut(s) | 458 |
| SnaBI | TACGTA | 1 cut(s) | 516 |
| Sse9I | AATT | 2 cut(s) | 188, 401 |
| SsiI | CCGC | 2 cut(s) | 18, 232 |
| SspI | AATATT | 2 cut(s) | 580, 586 |
| StyI | CCWWGG | 1 cut(s) | 463 |
| TaaI | ACNGT | 4 cut(s) | 453, 458, 497, 558 |
| TaiI | ACGT | 4 cut(s) | 44, 153, 272, 518 |
| TaqI | TCGA | 6 cut(s) | 35, 161, 279, 294, 315, 409 |
| TasI | AATT | 2 cut(s) | 188, 401 |
| TfiI | GAWTC | 2 cut(s) | 89, 364 |
| Tru1I | TTAA | 5 cut(s) | 110, 443, 551, 582, 588 |
| Tru9I | TTAA | 5 cut(s) | 110, 443, 551, 582, 588 |
| TseFI | GTSAC | 1 cut(s) | 424 |
| TseI | GCWGC | 2 cut(s) | 155, 196 |
| Tsp45I | GTSAC | 1 cut(s) | 424 |
| TspGWI | ACGGA | 1 cut(s) | 17 |
| VpaK11BI | GGWCC | 1 cut(s) | 458 |
| VspI | ATTAAT | 1 cut(s) | 582 |
| XceI | RCATGY | 2 cut(s) | 173, 549 |