protein ubiquitination
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| PGG | PF13962 | 32 - 141 | 2.3e-23 | Domain of unknown function |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 442 |
| AcvI | CACGTG | 1 cut(s) | 38 |
| AdeI | CACNNNGTG | 1 cut(s) | 38 |
| AfaI | GTAC | 1 cut(s) | 115 |
| AgsI | TTSAA | 1 cut(s) | 461 |
| AhlI | ACTAGT | 1 cut(s) | 256 |
| AjiI | CACGTC | 1 cut(s) | 303 |
| AjnI | CCWGG | 2 cut(s) | 169, 550 |
| AluBI | AGCT | 1 cut(s) | 43 |
| AluI | AGCT | 1 cut(s) | 43 |
| Alw21I | GWGCWC | 2 cut(s) | 45, 130 |
| ApeKI | GCWGC | 2 cut(s) | 152, 155 |
| ApoI | RAATTY | 1 cut(s) | 442 |
| AseI | ATTAAT | 1 cut(s) | 68 |
| AspS9I | GGNCC | 1 cut(s) | 548 |
| AsuHPI | GGTGA | 2 cut(s) | 443, 481 |
| AvaII | GGWCC | 1 cut(s) | 548 |
| BanII | GRGCYC | 1 cut(s) | 45 |
| BauI | CACGAG | 1 cut(s) | 59 |
| BbrPI | CACGTG | 1 cut(s) | 38 |
| BbsI | GAAGAC | 2 cut(s) | 90, 188 |
| Bbv12I | GWGCWC | 2 cut(s) | 45, 130 |
| BbvI | GCAGC | 2 cut(s) | 139, 167 |
| BccI | CCATC | 2 cut(s) | 149, 239 |
| BciT130I | CCWGG | 2 cut(s) | 171, 552 |
| BcuI | ACTAGT | 1 cut(s) | 256 |
| BfaI | CTAG | 1 cut(s) | 257 |
| BfmI | CTRYAG | 1 cut(s) | 153 |
| BisI | GCNGC | 2 cut(s) | 153, 156 |
| BlsI | GCNGC | 2 cut(s) | 154, 157 |
| Bme1390I | CCNGG | 2 cut(s) | 171, 552 |
| Bme18I | GGWCC | 1 cut(s) | 548 |
| BmgBI | CACGTC | 1 cut(s) | 303 |
| BmgT120I | GGNCC | 1 cut(s) | 548 |
| BmrFI | CCNGG | 2 cut(s) | 171, 552 |
| BmsI | GCATC | 2 cut(s) | 67, 495 |
| BpiI | GAAGAC | 2 cut(s) | 90, 188 |
| BsaAI | YACGTR | 1 cut(s) | 38 |
| BsaBI | GATNNNNATC | 1 cut(s) | 533 |
| BsaJI | CCNNGG | 1 cut(s) | 578 |
| Bse8I | GATNNNNATC | 1 cut(s) | 533 |
| BseBI | CCWGG | 2 cut(s) | 171, 552 |
| BseDI | CCNNGG | 1 cut(s) | 578 |
| BseGI | GGATG | 3 cut(s) | 31, 82, 510 |
| BseJI | GATNNNNATC | 1 cut(s) | 533 |
| BseMII | CTCAG | 1 cut(s) | 288 |
| BseXI | GCAGC | 2 cut(s) | 139, 167 |
| BsgI | GTGCAG | 1 cut(s) | 396 |
| BsiHKAI | GWGCWC | 2 cut(s) | 45, 130 |
| BsmI | GAATGC | 1 cut(s) | 158 |
| Bsp1286I | GDGCHC | 2 cut(s) | 45, 130 |
| Bsp1407I | TGTACA | 1 cut(s) | 113 |
| Bsp143I | GATC | 3 cut(s) | 396, 486, 570 |
| BspCNI | CTCAG | 1 cut(s) | 287 |
| BspMAI | CTGCAG | 1 cut(s) | 157 |
| BsrGI | TGTACA | 1 cut(s) | 113 |
| BssECI | CCNNGG | 1 cut(s) | 578 |
| BssMI | GATC | 3 cut(s) | 396, 486, 570 |
| BssSI | CACGAG | 1 cut(s) | 59 |
| BssT1I | CCWWGG | 1 cut(s) | 578 |
| Bst2BI | CACGAG | 1 cut(s) | 59 |
| Bst2UI | CCWGG | 2 cut(s) | 171, 552 |
| Bst4CI | ACNGT | 2 cut(s) | 118, 421 |
| Bst6I | CTCTTC | 1 cut(s) | 377 |
| BstAUI | TGTACA | 1 cut(s) | 113 |
| BstBAI | YACGTR | 1 cut(s) | 38 |
| BstC8I | GCNNGC | 1 cut(s) | 474 |
| BstDEI | CTNAG | 2 cut(s) | 274, 447 |
| BstF5I | GGATG | 3 cut(s) | 31, 82, 510 |
| BstKTI | GATC | 3 cut(s) | 399, 489, 573 |
| BstMBI | GATC | 3 cut(s) | 396, 486, 570 |
| BstNI | CCWGG | 2 cut(s) | 171, 552 |
| BstSCI | CCNGG | 2 cut(s) | 169, 550 |
| BstSFI | CTRYAG | 1 cut(s) | 153 |
| BstV1I | GCAGC | 2 cut(s) | 139, 167 |
| BstV2I | GAAGAC | 2 cut(s) | 90, 188 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 208 |
| BtrI | CACGTC | 1 cut(s) | 303 |
| BtsCI | GGATG | 3 cut(s) | 31, 82, 510 |
| Cac8I | GCNNGC | 1 cut(s) | 474 |
| Cfr13I | GGNCC | 1 cut(s) | 548 |
| Csp6I | GTAC | 1 cut(s) | 114 |
| CviAII | CATG | 3 cut(s) | 5, 145, 208 |
| CviJI | RGCY | 2 cut(s) | 43, 476 |
| CviKI_1 | RGCY | 2 cut(s) | 43, 476 |
| CviQI | GTAC | 1 cut(s) | 114 |
| DdeI | CTNAG | 2 cut(s) | 274, 447 |
| DpnI | GATC | 3 cut(s) | 398, 488, 572 |
| DpnII | GATC | 3 cut(s) | 396, 486, 570 |
| DraIII | CACNNNGTG | 1 cut(s) | 38 |
| Eam1104I | CTCTTC | 1 cut(s) | 377 |
| EarI | CTCTTC | 1 cut(s) | 377 |
| Ecl136II | GAGCTC | 1 cut(s) | 43 |
| Eco130I | CCWWGG | 1 cut(s) | 578 |
| Eco24I | GRGCYC | 1 cut(s) | 45 |
| Eco47I | GGWCC | 1 cut(s) | 548 |
| Eco53kI | GAGCTC | 1 cut(s) | 43 |
| Eco72I | CACGTG | 1 cut(s) | 38 |
| EcoICRI | GAGCTC | 1 cut(s) | 43 |
| EcoRII | CCWGG | 2 cut(s) | 169, 550 |
| EcoT14I | CCWWGG | 1 cut(s) | 578 |
| EcoT22I | ATGCAT | 1 cut(s) | 6 |
| EcoT38I | GRGCYC | 1 cut(s) | 45 |
| ErhI | CCWWGG | 1 cut(s) | 578 |
| FaeI | CATG | 3 cut(s) | 8, 148, 211 |
| FatI | CATG | 3 cut(s) | 4, 144, 207 |
| Fnu4HI | GCNGC | 2 cut(s) | 153, 156 |
| FokI | GGATG | 3 cut(s) | 38, 89, 517 |
| FriOI | GRGCYC | 1 cut(s) | 45 |
| Fsp4HI | GCNGC | 2 cut(s) | 153, 156 |
| FspBI | CTAG | 1 cut(s) | 257 |
| GluI | GCNGC | 2 cut(s) | 153, 156 |
| Hin1II | CATG | 3 cut(s) | 8, 148, 211 |
| HinfI | GANTC | 3 cut(s) | 8, 86, 294 |
| HphI | GGTGA | 2 cut(s) | 443, 481 |
| Hpy188I | TCNGA | 2 cut(s) | 25, 486 |
| Hpy188III | TCNNGA | 1 cut(s) | 59 |
| HpyAV | CCTTC | 2 cut(s) | 67, 526 |
| HpyCH4III | ACNGT | 2 cut(s) | 118, 421 |
| HpyCH4IV | ACGT | 3 cut(s) | 37, 302, 307 |
| HpyCH4V | TGCA | 7 cut(s) | 4, 80, 155, 242, 314, 413, 508 |
| HpyF3I | CTNAG | 2 cut(s) | 274, 447 |
| HpySE526I | ACGT | 3 cut(s) | 37, 302, 307 |
| Hsp92II | CATG | 3 cut(s) | 8, 148, 211 |
| Kzo9I | GATC | 3 cut(s) | 396, 486, 570 |
| LpnPI | CCDG | 6 cut(s) | 156, 177, 183, 458, 537, 564 |
| Lsp1109I | GCAGC | 2 cut(s) | 139, 167 |
| LweI | GCATC | 2 cut(s) | 67, 495 |
| MaeI | CTAG | 1 cut(s) | 257 |
| MaeII | ACGT | 3 cut(s) | 37, 302, 307 |
| MaeIII | GTNAC | 5 cut(s) | 28, 56, 136, 185, 303 |
| MalI | GATC | 3 cut(s) | 398, 488, 572 |
| MboI | GATC | 3 cut(s) | 396, 486, 570 |
| MboII | GAAGA | 8 cut(s) | 95, 188, 329, 364, 367, 399, 473, 580 |
| MhlI | GDGCHC | 2 cut(s) | 45, 130 |
| MluCI | AATT | 5 cut(s) | 65, 90, 279, 381, 442 |
| MlyI | GAGTC | 1 cut(s) | 80 |
| MnlI | CCTC | 5 cut(s) | 283, 308, 338, 380, 502 |
| Mph1103I | ATGCAT | 1 cut(s) | 6 |
| MseI | TTAA | 3 cut(s) | 68, 93, 225 |
| MslI | CAYNNNNRTG | 2 cut(s) | 206, 499 |
| MspR9I | CCNGG | 2 cut(s) | 171, 552 |
| Mva1269I | GAATGC | 1 cut(s) | 158 |
| MvaI | CCWGG | 2 cut(s) | 171, 552 |
| NdeII | GATC | 3 cut(s) | 396, 486, 570 |
| NlaIII | CATG | 3 cut(s) | 8, 148, 211 |
| NmuCI | GTSAC | 3 cut(s) | 28, 56, 303 |
| NsiI | ATGCAT | 1 cut(s) | 6 |
| PctI | GAATGC | 1 cut(s) | 158 |
| PfeI | GAWTC | 2 cut(s) | 8, 294 |
| PkrI | GCNGC | 2 cut(s) | 154, 157 |
| PleI | GAGTC | 1 cut(s) | 80 |
| PmaCI | CACGTG | 1 cut(s) | 38 |
| PmlI | CACGTG | 1 cut(s) | 38 |
| PpsI | GAGTC | 1 cut(s) | 80 |
| Ppu21I | YACGTR | 1 cut(s) | 38 |
| PshBI | ATTAAT | 1 cut(s) | 68 |
| Psp124BI | GAGCTC | 1 cut(s) | 45 |
| Psp6I | CCWGG | 2 cut(s) | 169, 550 |
| PspCI | CACGTG | 1 cut(s) | 38 |
| PspGI | CCWGG | 2 cut(s) | 169, 550 |
| PspPI | GGNCC | 1 cut(s) | 548 |
| PstI | CTGCAG | 1 cut(s) | 157 |
| RsaI | GTAC | 1 cut(s) | 115 |
| RsaNI | GTAC | 1 cut(s) | 114 |
| RseI | CAYNNNNRTG | 2 cut(s) | 206, 499 |
| SacI | GAGCTC | 1 cut(s) | 45 |
| SaqAI | TTAA | 3 cut(s) | 68, 93, 225 |
| SatI | GCNGC | 2 cut(s) | 153, 156 |
| Sau3AI | GATC | 3 cut(s) | 396, 486, 570 |
| Sau96I | GGNCC | 1 cut(s) | 548 |
| SchI | GAGTC | 1 cut(s) | 80 |
| ScrFI | CCNGG | 2 cut(s) | 171, 552 |
| SduI | GDGCHC | 2 cut(s) | 45, 130 |
| SetI | ASST | 8 cut(s) | 40, 45, 196, 275, 305, 310, 494, 580 |
| SfaNI | GCATC | 2 cut(s) | 67, 495 |
| SfcI | CTRYAG | 1 cut(s) | 153 |
| SinI | GGWCC | 1 cut(s) | 548 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 206, 499 |
| SpeI | ACTAGT | 1 cut(s) | 256 |
| Sse9I | AATT | 5 cut(s) | 65, 90, 279, 381, 442 |
| SspI | AATATT | 2 cut(s) | 19, 558 |
| SspMI | CTAG | 1 cut(s) | 257 |
| SstI | GAGCTC | 1 cut(s) | 45 |
| StyD4I | CCNGG | 2 cut(s) | 169, 550 |
| StyI | CCWWGG | 1 cut(s) | 578 |
| TaaI | ACNGT | 2 cut(s) | 118, 421 |
| TaiI | ACGT | 3 cut(s) | 40, 305, 310 |
| TasI | AATT | 5 cut(s) | 65, 90, 279, 381, 442 |
| TatI | WGTACW | 1 cut(s) | 113 |
| TfiI | GAWTC | 2 cut(s) | 8, 294 |
| Tru1I | TTAA | 3 cut(s) | 68, 93, 225 |
| Tru9I | TTAA | 3 cut(s) | 68, 93, 225 |
| TseFI | GTSAC | 3 cut(s) | 28, 56, 303 |
| TseI | GCWGC | 2 cut(s) | 152, 155 |
| Tsp45I | GTSAC | 3 cut(s) | 28, 56, 303 |
| TspDTI | ATGAA | 5 cut(s) | 21, 86, 196, 508, 523 |
| VpaK11BI | GGWCC | 1 cut(s) | 548 |
| VspI | ATTAAT | 1 cut(s) | 68 |
| XapI | RAATTY | 1 cut(s) | 442 |
| XspI | CTAG | 1 cut(s) | 257 |
| Zsp2I | ATGCAT | 1 cut(s) | 6 |