protein ubiquitination
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 222 |
| AarI | CACCTGC | 1 cut(s) | 1402 |
| AatII | GACGTC | 1 cut(s) | 656 |
| Acc36I | ACCTGC | 1 cut(s) | 1402 |
| AccI | GTMKAC | 2 cut(s) | 656, 1500 |
| AccII | CGCG | 1 cut(s) | 1789 |
| AciI | CCGC | 2 cut(s) | 54, 597 |
| AclWI | GGATC | 6 cut(s) | 565, 869, 892, 905, 1048, 1709 |
| AcoI | YGGCCR | 3 cut(s) | 93, 598, 2040 |
| AcsI | RAATTY | 1 cut(s) | 1304 |
| AcyI | GRCGYC | 1 cut(s) | 653 |
| AfaI | GTAC | 2 cut(s) | 1140, 1603 |
| AfeI | AGCGCT | 1 cut(s) | 682 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 757, 1977 |
| AgeI | ACCGGT | 1 cut(s) | 194 |
| AjnI | CCWGG | 2 cut(s) | 104, 1657 |
| Alw21I | GWGCWC | 1 cut(s) | 1618 |
| Alw26I | GTCTC | 3 cut(s) | 965, 1006, 1972 |
| AlwI | GGATC | 6 cut(s) | 565, 869, 892, 905, 1048, 1709 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1658 |
| Aor51HI | AGCGCT | 1 cut(s) | 682 |
| AoxI | GGCC | 4 cut(s) | 93, 598, 2040, 2063 |
| ApeKI | GCWGC | 2 cut(s) | 1376, 1421 |
| ApoI | RAATTY | 1 cut(s) | 1304 |
| AseI | ATTAAT | 1 cut(s) | 416 |
| AsiGI | ACCGGT | 1 cut(s) | 194 |
| AspLEI | GCGC | 1 cut(s) | 683 |
| AsuC2I | CCSGG | 2 cut(s) | 80, 941 |
| AsuHPI | GGTGA | 4 cut(s) | 299, 1580, 1840, 1888 |
| BalI | TGGCCA | 1 cut(s) | 2042 |
| BamHI | GGATCC | 1 cut(s) | 897 |
| BanII | GRGCYC | 1 cut(s) | 999 |
| BbsI | GAAGAC | 2 cut(s) | 444, 459 |
| Bbv12I | GWGCWC | 1 cut(s) | 1618 |
| BbvI | GCAGC | 2 cut(s) | 1388, 1433 |
| BccI | CCATC | 3 cut(s) | 261, 1505, 1825 |
| BceAI | ACGGC | 4 cut(s) | 108, 247, 610, 1257 |
| BciT130I | CCWGG | 2 cut(s) | 106, 1659 |
| BciVI | GTATCC | 2 cut(s) | 103, 1218 |
| BclI | TGATCA | 1 cut(s) | 139 |
| BcnI | CCSGG | 2 cut(s) | 80, 941 |
| BcoDI | GTCTC | 3 cut(s) | 965, 1006, 1972 |
| BfaI | CTAG | 5 cut(s) | 482, 510, 678, 1214, 1953 |
| BfoI | RGCGCY | 1 cut(s) | 684 |
| BfuAI | ACCTGC | 1 cut(s) | 1402 |
| BfuI | GTATCC | 2 cut(s) | 103, 1218 |
| BglII | AGATCT | 1 cut(s) | 2004 |
| BisI | GCNGC | 3 cut(s) | 598, 1377, 1422 |
| BlsI | GCNGC | 3 cut(s) | 599, 1378, 1423 |
| Bme1390I | CCNGG | 4 cut(s) | 80, 106, 941, 1659 |
| BmiI | GGNNCC | 3 cut(s) | 899, 1666, 1935 |
| BmrFI | CCNGG | 4 cut(s) | 80, 106, 941, 1659 |
| BmrI | ACTGGG | 2 cut(s) | 301, 789 |
| BmsI | GCATC | 6 cut(s) | 165, 331, 503, 847, 1422, 1971 |
| BmuI | ACTGGG | 2 cut(s) | 301, 789 |
| BoxI | GACNNNNGTC | 1 cut(s) | 669 |
| BpiI | GAAGAC | 2 cut(s) | 444, 459 |
| BpuMI | CCSGG | 2 cut(s) | 80, 941 |
| Bsa29I | ATCGAT | 1 cut(s) | 1029 |
| BsaHI | GRCGYC | 1 cut(s) | 653 |
| BsaI | GGTCTC | 1 cut(s) | 965 |
| BsaJI | CCNNGG | 7 cut(s) | 79, 105, 147, 432, 1668, 1872, 2060 |
| BsaWI | WCCGGW | 1 cut(s) | 194 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 757, 1977 |
| Bse118I | RCCGGY | 2 cut(s) | 133, 194 |
| Bse1I | ACTGG | 3 cut(s) | 296, 784, 2032 |
| Bse3DI | GCAATG | 2 cut(s) | 1424, 1817 |
| BseBI | CCWGG | 2 cut(s) | 106, 1659 |
| BseCI | ATCGAT | 1 cut(s) | 1029 |
| BseDI | CCNNGG | 7 cut(s) | 79, 105, 147, 432, 1668, 1872, 2060 |
| BseGI | GGATG | 4 cut(s) | 64, 322, 432, 1986 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 757, 1977 |
| BseMI | GCAATG | 2 cut(s) | 1424, 1817 |
| BseMII | CTCAG | 1 cut(s) | 1665 |
| BseNI | ACTGG | 3 cut(s) | 296, 784, 2032 |
| BseRI | GAGGAG | 1 cut(s) | 1849 |
| BseXI | GCAGC | 2 cut(s) | 1388, 1433 |
| BsgI | GTGCAG | 2 cut(s) | 1380, 1440 |
| Bsh1236I | CGCG | 1 cut(s) | 1789 |
| BshFI | GGCC | 4 cut(s) | 95, 600, 2042, 2065 |
| BshTI | ACCGGT | 1 cut(s) | 194 |
| BshVI | ATCGAT | 1 cut(s) | 1029 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1618 |
| BsiSI | CCGG | 4 cut(s) | 79, 134, 195, 941 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 757, 1977 |
| BsmAI | GTCTC | 3 cut(s) | 965, 1006, 1972 |
| BsmBI | CGTCTC | 1 cut(s) | 1006 |
| BsmI | GAATGC | 1 cut(s) | 1274 |
| BsnI | GGCC | 4 cut(s) | 95, 600, 2042, 2065 |
| Bso31I | GGTCTC | 1 cut(s) | 965 |
| Bsp1286I | GDGCHC | 2 cut(s) | 999, 1618 |
| Bsp19I | CCATGG | 1 cut(s) | 1872 |
| BspACI | CCGC | 2 cut(s) | 54, 597 |
| BspANI | GGCC | 4 cut(s) | 95, 600, 2042, 2065 |
| BspCNI | CTCAG | 1 cut(s) | 1664 |
| BspDI | ATCGAT | 1 cut(s) | 1029 |
| BspFNI | CGCG | 1 cut(s) | 1789 |
| BspHI | TCATGA | 1 cut(s) | 1317 |
| BspLI | GGNNCC | 3 cut(s) | 899, 1666, 1935 |
| BspMI | ACCTGC | 1 cut(s) | 1402 |
| BspPI | GGATC | 6 cut(s) | 565, 869, 892, 905, 1048, 1709 |
| BspQI | GCTCTTC | 1 cut(s) | 375 |
| BspTNI | GGTCTC | 1 cut(s) | 965 |
| BsrDI | GCAATG | 2 cut(s) | 1424, 1817 |
| BsrFI | RCCGGY | 2 cut(s) | 133, 194 |
| BsrI | ACTGG | 3 cut(s) | 296, 784, 2032 |
| BssAI | RCCGGY | 2 cut(s) | 133, 194 |
| BssECI | CCNNGG | 7 cut(s) | 79, 105, 147, 432, 1668, 1872, 2060 |
| BssNAI | GTATAC | 1 cut(s) | 1501 |
| BssNI | GRCGYC | 1 cut(s) | 653 |
| BssT1I | CCWWGG | 4 cut(s) | 147, 1668, 1872, 2060 |
| Bst1107I | GTATAC | 1 cut(s) | 1501 |
| Bst2UI | CCWGG | 2 cut(s) | 106, 1659 |
| Bst4CI | ACNGT | 5 cut(s) | 671, 701, 872, 1606, 2085 |
| Bst6I | CTCTTC | 3 cut(s) | 375, 1157, 1859 |
| BstACI | GRCGYC | 1 cut(s) | 653 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 552 |
| BstC8I | GCNNGC | 4 cut(s) | 135, 616, 1479, 1675 |
| BstDEI | CTNAG | 4 cut(s) | 1539, 1651, 1771, 2078 |
| BstDSI | CCRYGG | 1 cut(s) | 1872 |
| BstF5I | GGATG | 4 cut(s) | 64, 322, 432, 1986 |
| BstFNI | CGCG | 1 cut(s) | 1789 |
| BstH2I | RGCGCY | 1 cut(s) | 684 |
| BstHHI | GCGC | 1 cut(s) | 683 |
| BstMAI | GTCTC | 3 cut(s) | 965, 1006, 1972 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 101, 143, 175, 552 |
| BstNI | CCWGG | 2 cut(s) | 106, 1659 |
| BstNSI | RCATGY | 4 cut(s) | 38, 890, 1090, 1252 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 669 |
| BstSCI | CCNGG | 4 cut(s) | 78, 104, 939, 1657 |
| BstUI | CGCG | 1 cut(s) | 1789 |
| BstV1I | GCAGC | 2 cut(s) | 1388, 1433 |
| BstV2I | GAAGAC | 2 cut(s) | 444, 459 |
| BstX2I | RGATCY | 5 cut(s) | 861, 897, 1053, 1701, 2004 |
| BstYI | RGATCY | 5 cut(s) | 861, 897, 1053, 1701, 2004 |
| BstZ17I | GTATAC | 1 cut(s) | 1501 |
| Bsu15I | ATCGAT | 1 cut(s) | 1029 |
| BsuI | GTATCC | 2 cut(s) | 103, 1218 |
| BsuRI | GGCC | 4 cut(s) | 95, 600, 2042, 2065 |
| BsuTUI | ATCGAT | 1 cut(s) | 1029 |
| BtgI | CCRYGG | 1 cut(s) | 1872 |
| BtsCI | GGATG | 4 cut(s) | 64, 322, 432, 1986 |
| BtsIMutI | CAGTG | 2 cut(s) | 575, 697 |
| BveI | ACCTGC | 1 cut(s) | 1402 |
| Cac8I | GCNNGC | 4 cut(s) | 135, 616, 1479, 1675 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1658 |
| CciI | TCATGA | 1 cut(s) | 1317 |
| CfoI | GCGC | 1 cut(s) | 683 |
| Cfr10I | RCCGGY | 2 cut(s) | 133, 194 |
| ClaI | ATCGAT | 1 cut(s) | 1029 |
| CseI | GACGC | 3 cut(s) | 211, 338, 464 |
| Csp6I | GTAC | 2 cut(s) | 1139, 1602 |
| CspAI | ACCGGT | 1 cut(s) | 194 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 168, 203, 1740, 1775 |
| CviQI | GTAC | 2 cut(s) | 1139, 1602 |
| DdeI | CTNAG | 4 cut(s) | 1539, 1651, 1771, 2078 |
| DraI | TTTAAA | 1 cut(s) | 876 |
| EaeI | YGGCCR | 3 cut(s) | 93, 598, 2040 |
| Eam1104I | CTCTTC | 3 cut(s) | 375, 1157, 1859 |
| EarI | CTCTTC | 3 cut(s) | 375, 1157, 1859 |
| Eco130I | CCWWGG | 4 cut(s) | 147, 1668, 1872, 2060 |
| Eco24I | GRGCYC | 1 cut(s) | 999 |
| Eco31I | GGTCTC | 1 cut(s) | 965 |
| Eco47III | AGCGCT | 1 cut(s) | 682 |
| EcoRII | CCWGG | 2 cut(s) | 104, 1657 |
| EcoT14I | CCWWGG | 4 cut(s) | 147, 1668, 1872, 2060 |
| EcoT22I | ATGCAT | 1 cut(s) | 518 |
| EcoT38I | GRGCYC | 1 cut(s) | 999 |
| ErhI | CCWWGG | 4 cut(s) | 147, 1668, 1872, 2060 |
| Esp3I | CGTCTC | 1 cut(s) | 1006 |
| FauI | CCCGC | 1 cut(s) | 47 |
| FauNDI | CATATG | 1 cut(s) | 402 |
| FbaI | TGATCA | 1 cut(s) | 139 |
| FblI | GTMKAC | 2 cut(s) | 656, 1500 |
| Fnu4HI | GCNGC | 3 cut(s) | 598, 1377, 1422 |
| FokI | GGATG | 4 cut(s) | 71, 309, 439, 1993 |
| FriOI | GRGCYC | 1 cut(s) | 999 |
| Fsp4HI | GCNGC | 3 cut(s) | 598, 1377, 1422 |
| FspBI | CTAG | 5 cut(s) | 482, 510, 678, 1214, 1953 |
| GlaI | GCGC | 1 cut(s) | 682 |
| GluI | GCNGC | 3 cut(s) | 598, 1377, 1422 |
| HaeII | RGCGCY | 1 cut(s) | 684 |
| HaeIII | GGCC | 4 cut(s) | 95, 600, 2042, 2065 |
| HapII | CCGG | 4 cut(s) | 79, 134, 195, 941 |
| HgaI | GACGC | 3 cut(s) | 211, 338, 464 |
| HhaI | GCGC | 1 cut(s) | 683 |
| Hin1I | GRCGYC | 1 cut(s) | 653 |
| Hin6I | GCGC | 1 cut(s) | 681 |
| HinP1I | GCGC | 1 cut(s) | 681 |
| HincII | GTYRAC | 2 cut(s) | 657, 946 |
| HindII | GTYRAC | 2 cut(s) | 657, 946 |
| HindIII | AAGCTT | 1 cut(s) | 645 |
| HinfI | GANTC | 5 cut(s) | 268, 1026, 1314, 1334, 1776 |
| HpaI | GTTAAC | 1 cut(s) | 946 |
| HpaII | CCGG | 4 cut(s) | 79, 134, 195, 941 |
| HphI | GGTGA | 4 cut(s) | 299, 1580, 1840, 1888 |
| Hpy166II | GTNNAC | 5 cut(s) | 657, 946, 1016, 1200, 1501 |
| Hpy188I | TCNGA | 7 cut(s) | 201, 338, 564, 675, 1313, 1938, 1962 |
| Hpy188III | TCNNGA | 7 cut(s) | 43, 326, 1070, 1277, 1318, 1338, 1490 |
| Hpy8I | GTNNAC | 5 cut(s) | 657, 946, 1016, 1200, 1501 |
| Hpy99I | CGWCG | 2 cut(s) | 332, 658 |
| HpyAV | CCTTC | 3 cut(s) | 1097, 1559, 1981 |
| HpyCH4III | ACNGT | 5 cut(s) | 671, 701, 872, 1606, 2085 |
| HpyCH4IV | ACGT | 1 cut(s) | 653 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 101, 143, 175, 552 |
| HpyF3I | CTNAG | 4 cut(s) | 1539, 1651, 1771, 2078 |
| HpySE526I | ACGT | 1 cut(s) | 653 |
| Hsp92I | GRCGYC | 1 cut(s) | 653 |
| HspAI | GCGC | 1 cut(s) | 681 |
| KroI | GCCGGC | 1 cut(s) | 133 |
| KroNI | GCCGGC | 1 cut(s) | 135 |
| Ksp22I | TGATCA | 1 cut(s) | 139 |
| KspAI | GTTAAC | 1 cut(s) | 946 |
| LguI | GCTCTTC | 1 cut(s) | 375 |
| LmnI | GCTCC | 1 cut(s) | 713 |
| Lsp1109I | GCAGC | 2 cut(s) | 1388, 1433 |
| LweI | GCATC | 6 cut(s) | 165, 331, 503, 847, 1422, 1971 |
| MaeI | CTAG | 5 cut(s) | 482, 510, 678, 1214, 1953 |
| MaeII | ACGT | 1 cut(s) | 653 |
| MaeIII | GTNAC | 7 cut(s) | 287, 466, 590, 631, 1443, 1624, 1762 |
| MflI | RGATCY | 5 cut(s) | 861, 897, 1053, 1701, 2004 |
| MhlI | GDGCHC | 2 cut(s) | 999, 1618 |
| MlsI | TGGCCA | 1 cut(s) | 2042 |
| MluNI | TGGCCA | 1 cut(s) | 2042 |
| MmeI | TCCRAC | 1 cut(s) | 653 |
| Mox20I | TGGCCA | 1 cut(s) | 2042 |
| Mph1103I | ATGCAT | 1 cut(s) | 518 |
| MroNI | GCCGGC | 1 cut(s) | 133 |
| MscI | TGGCCA | 1 cut(s) | 2042 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1173 |
| Msp20I | TGGCCA | 1 cut(s) | 2042 |
| MspA1I | CMGCKG | 1 cut(s) | 1195 |
| MspI | CCGG | 4 cut(s) | 79, 134, 195, 941 |
| MspR9I | CCNGG | 4 cut(s) | 80, 106, 941, 1659 |
| MssI | GTTTAAAC | 1 cut(s) | 876 |
| Mva1269I | GAATGC | 1 cut(s) | 1274 |
| MvaI | CCWGG | 2 cut(s) | 106, 1659 |
| MvnI | CGCG | 1 cut(s) | 1789 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 101, 143, 175, 552 |
| NaeI | GCCGGC | 1 cut(s) | 135 |
| NciI | CCSGG | 2 cut(s) | 80, 941 |
| NcoI | CCATGG | 1 cut(s) | 1872 |
| NdeI | CATATG | 1 cut(s) | 402 |
| NgoMIV | GCCGGC | 1 cut(s) | 133 |
| NlaIV | GGNNCC | 3 cut(s) | 899, 1666, 1935 |
| NmuCI | GTSAC | 3 cut(s) | 287, 466, 590 |
| NsiI | ATGCAT | 1 cut(s) | 518 |
| NspI | RCATGY | 4 cut(s) | 38, 890, 1090, 1252 |
| PagI | TCATGA | 1 cut(s) | 1317 |
| PaqCI | CACCTGC | 1 cut(s) | 1402 |
| PciSI | GCTCTTC | 1 cut(s) | 375 |
| PctI | GAATGC | 1 cut(s) | 1274 |
| PdiI | GCCGGC | 1 cut(s) | 135 |
| PfeI | GAWTC | 5 cut(s) | 268, 1026, 1314, 1334, 1776 |
| PflFI | GACNNNGTC | 1 cut(s) | 332 |
| PinAI | ACCGGT | 1 cut(s) | 194 |
| PkrI | GCNGC | 3 cut(s) | 599, 1378, 1423 |
| PmeI | GTTTAAAC | 1 cut(s) | 876 |
| PshAI | GACNNNNGTC | 1 cut(s) | 669 |
| PshBI | ATTAAT | 1 cut(s) | 416 |
| PsiI | TTATAA | 1 cut(s) | 222 |
| Psp6I | CCWGG | 2 cut(s) | 104, 1657 |
| PspGI | CCWGG | 2 cut(s) | 104, 1657 |
| PspN4I | GGNNCC | 3 cut(s) | 899, 1666, 1935 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1638, 1670 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1658 |
| PsuI | RGATCY | 5 cut(s) | 861, 897, 1053, 1701, 2004 |
| PsyI | GACNNNGTC | 1 cut(s) | 332 |
| PvuII | CAGCTG | 1 cut(s) | 1195 |
| RsaI | GTAC | 2 cut(s) | 1140, 1603 |
| RsaNI | GTAC | 2 cut(s) | 1139, 1602 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1173 |
| SalI | GTCGAC | 1 cut(s) | 655 |
| SapI | GCTCTTC | 1 cut(s) | 375 |
| SatI | GCNGC | 3 cut(s) | 598, 1377, 1422 |
| ScrFI | CCNGG | 4 cut(s) | 80, 106, 941, 1659 |
| SduI | GDGCHC | 2 cut(s) | 999, 1618 |
| SfaNI | GCATC | 6 cut(s) | 165, 331, 503, 847, 1422, 1971 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1173 |
| SsiI | CCGC | 2 cut(s) | 54, 597 |
| SspI | AATATT | 1 cut(s) | 2034 |
| SspMI | CTAG | 5 cut(s) | 482, 510, 678, 1214, 1953 |
| StyD4I | CCNGG | 4 cut(s) | 78, 104, 939, 1657 |
| StyI | CCWWGG | 4 cut(s) | 147, 1668, 1872, 2060 |
| TaaI | ACNGT | 5 cut(s) | 671, 701, 872, 1606, 2085 |
| TaiI | ACGT | 1 cut(s) | 656 |
| TaqI | TCGA | 5 cut(s) | 362, 522, 656, 720, 1029 |
| TaqII | GACCGA | 1 cut(s) | 446 |
| TauI | GCSGC | 1 cut(s) | 600 |
| TfiI | GAWTC | 5 cut(s) | 268, 1026, 1314, 1334, 1776 |
| TscAI | CASTG | 2 cut(s) | 582, 704 |
| TseFI | GTSAC | 3 cut(s) | 287, 466, 590 |
| TseI | GCWGC | 2 cut(s) | 1376, 1421 |
| Tsp45I | GTSAC | 3 cut(s) | 287, 466, 590 |
| TspDTI | ATGAA | 8 cut(s) | 198, 260, 339, 1317, 1334, 1595, 1812, 1999 |
| TspGWI | ACGGA | 5 cut(s) | 890, 1001, 1126, 1178, 2037 |
| TspRI | CASTG | 2 cut(s) | 582, 704 |
| Tth111I | GACNNNGTC | 1 cut(s) | 332 |
| VspI | ATTAAT | 1 cut(s) | 416 |
| XapI | RAATTY | 1 cut(s) | 1304 |
| XceI | RCATGY | 4 cut(s) | 38, 890, 1090, 1252 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1756 |
| XmiI | GTMKAC | 2 cut(s) | 656, 1500 |
| XspI | CTAG | 5 cut(s) | 482, 510, 678, 1214, 1953 |
| ZraI | GACGTC | 1 cut(s) | 654 |
| Zsp2I | ATGCAT | 1 cut(s) | 518 |