protein ubiquitination
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| PGG | PF13962 | 40 - 152 | 9.9e-23 | Domain of unknown function |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 762, 765 |
| AclI | AACGTT | 1 cut(s) | 311 |
| AcsI | RAATTY | 2 cut(s) | 327, 784 |
| AcuI | CTGAAG | 2 cut(s) | 383, 775 |
| AgsI | TTSAA | 2 cut(s) | 504, 747 |
| AjiI | CACGTC | 1 cut(s) | 336 |
| AjnI | CCWGG | 2 cut(s) | 205, 473 |
| AluBI | AGCT | 1 cut(s) | 648 |
| AluI | AGCT | 1 cut(s) | 648 |
| Alw21I | GWGCWC | 1 cut(s) | 166 |
| Alw26I | GTCTC | 1 cut(s) | 128 |
| AoxI | GGCC | 1 cut(s) | 445 |
| ApeKI | GCWGC | 2 cut(s) | 188, 767 |
| ApoI | RAATTY | 2 cut(s) | 327, 784 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 788 |
| BaeGI | GKGCMC | 1 cut(s) | 546 |
| Bbv12I | GWGCWC | 1 cut(s) | 166 |
| BbvI | GCAGC | 2 cut(s) | 175, 754 |
| BccI | CCATC | 2 cut(s) | 185, 764 |
| BceAI | ACGGC | 1 cut(s) | 755 |
| BciT130I | CCWGG | 2 cut(s) | 207, 475 |
| BcoDI | GTCTC | 1 cut(s) | 128 |
| BfmI | CTRYAG | 2 cut(s) | 189, 649 |
| BisI | GCNGC | 3 cut(s) | 189, 765, 768 |
| BlsI | GCNGC | 3 cut(s) | 190, 766, 769 |
| Bme1390I | CCNGG | 2 cut(s) | 207, 475 |
| BmgBI | CACGTC | 1 cut(s) | 336 |
| BmrFI | CCNGG | 2 cut(s) | 207, 475 |
| BmsI | GCATC | 1 cut(s) | 268 |
| BpmI | CTGGAG | 1 cut(s) | 228 |
| Bsa29I | ATCGAT | 1 cut(s) | 243 |
| BsaJI | CCNNGG | 1 cut(s) | 71 |
| Bse1I | ACTGG | 1 cut(s) | 229 |
| BseBI | CCWGG | 2 cut(s) | 207, 475 |
| BseCI | ATCGAT | 1 cut(s) | 243 |
| BseDI | CCNNGG | 1 cut(s) | 71 |
| BseGI | GGATG | 2 cut(s) | 132, 756 |
| BseNI | ACTGG | 1 cut(s) | 229 |
| BseSI | GKGCMC | 1 cut(s) | 546 |
| BseXI | GCAGC | 2 cut(s) | 175, 754 |
| BshFI | GGCC | 1 cut(s) | 447 |
| BshVI | ATCGAT | 1 cut(s) | 243 |
| BsiHKAI | GWGCWC | 1 cut(s) | 166 |
| BslFI | GGGAC | 1 cut(s) | 762 |
| BsmAI | GTCTC | 1 cut(s) | 128 |
| BsmFI | GGGAC | 1 cut(s) | 762 |
| BsnI | GGCC | 1 cut(s) | 447 |
| Bsp1286I | GDGCHC | 2 cut(s) | 166, 546 |
| BspACI | CCGC | 2 cut(s) | 762, 765 |
| BspANI | GGCC | 1 cut(s) | 447 |
| BspDI | ATCGAT | 1 cut(s) | 243 |
| BspMAI | CTGCAG | 1 cut(s) | 193 |
| BsrI | ACTGG | 1 cut(s) | 229 |
| BssECI | CCNNGG | 1 cut(s) | 71 |
| BssT1I | CCWWGG | 1 cut(s) | 71 |
| Bst2UI | CCWGG | 2 cut(s) | 207, 475 |
| Bst4CI | ACNGT | 3 cut(s) | 98, 154, 548 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 440 |
| BstC8I | GCNNGC | 1 cut(s) | 445 |
| BstDEI | CTNAG | 1 cut(s) | 30 |
| BstF5I | GGATG | 2 cut(s) | 132, 756 |
| BstMAI | GTCTC | 1 cut(s) | 128 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 440, 645 |
| BstNI | CCWGG | 2 cut(s) | 207, 475 |
| BstSCI | CCNGG | 2 cut(s) | 205, 473 |
| BstSFI | CTRYAG | 2 cut(s) | 189, 649 |
| BstSLI | GKGCMC | 1 cut(s) | 546 |
| BstV1I | GCAGC | 2 cut(s) | 175, 754 |
| Bsu15I | ATCGAT | 1 cut(s) | 243 |
| BsuRI | GGCC | 1 cut(s) | 447 |
| BsuTUI | ATCGAT | 1 cut(s) | 243 |
| BtrI | CACGTC | 1 cut(s) | 336 |
| BtsCI | GGATG | 2 cut(s) | 132, 756 |
| BtsIMutI | CAGTG | 2 cut(s) | 103, 150 |
| Cac8I | GCNNGC | 1 cut(s) | 445 |
| ClaI | ATCGAT | 1 cut(s) | 243 |
| CviAII | CATG | 4 cut(s) | 181, 424, 614, 781 |
| CviJI | RGCY | 4 cut(s) | 228, 447, 648, 712 |
| CviKI_1 | RGCY | 4 cut(s) | 228, 447, 648, 712 |
| DdeI | CTNAG | 1 cut(s) | 30 |
| DraI | TTTAAA | 1 cut(s) | 661 |
| Eco130I | CCWWGG | 1 cut(s) | 71 |
| Eco57I | CTGAAG | 2 cut(s) | 383, 775 |
| EcoRII | CCWGG | 2 cut(s) | 205, 473 |
| EcoT14I | CCWWGG | 1 cut(s) | 71 |
| ErhI | CCWWGG | 1 cut(s) | 71 |
| FaeI | CATG | 4 cut(s) | 184, 427, 617, 784 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 45, 77 |
| FaqI | GGGAC | 1 cut(s) | 762 |
| FatI | CATG | 4 cut(s) | 180, 423, 613, 780 |
| FauI | CCCGC | 1 cut(s) | 769 |
| Fnu4HI | GCNGC | 3 cut(s) | 189, 765, 768 |
| FokI | GGATG | 2 cut(s) | 139, 743 |
| Fsp4HI | GCNGC | 3 cut(s) | 189, 765, 768 |
| GluI | GCNGC | 3 cut(s) | 189, 765, 768 |
| GsuI | CTGGAG | 1 cut(s) | 228 |
| HaeIII | GGCC | 1 cut(s) | 447 |
| Hin1II | CATG | 4 cut(s) | 184, 427, 617, 784 |
| HincII | GTYRAC | 1 cut(s) | 315 |
| HindII | GTYRAC | 1 cut(s) | 315 |
| HinfI | GANTC | 4 cut(s) | 91, 470, 484, 515 |
| Hpy166II | GTNNAC | 1 cut(s) | 315 |
| Hpy188I | TCNGA | 2 cut(s) | 277, 489 |
| Hpy188III | TCNNGA | 4 cut(s) | 38, 323, 361, 467 |
| Hpy8I | GTNNAC | 1 cut(s) | 315 |
| Hpy99I | CGWCG | 1 cut(s) | 468 |
| HpyAV | CCTTC | 4 cut(s) | 107, 458, 533, 689 |
| HpyCH4III | ACNGT | 3 cut(s) | 98, 154, 548 |
| HpyCH4IV | ACGT | 4 cut(s) | 311, 317, 335, 340 |
| HpyCH4V | TGCA | 6 cut(s) | 4, 140, 191, 308, 434, 717 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 440, 645 |
| HpyF3I | CTNAG | 1 cut(s) | 30 |
| HpySE526I | ACGT | 4 cut(s) | 311, 317, 335, 340 |
| Hsp92II | CATG | 4 cut(s) | 184, 427, 617, 784 |
| Lsp1109I | GCAGC | 2 cut(s) | 175, 754 |
| LweI | GCATC | 1 cut(s) | 268 |
| MaeII | ACGT | 4 cut(s) | 311, 317, 335, 340 |
| MaeIII | GTNAC | 2 cut(s) | 336, 341 |
| MboII | GAAGA | 4 cut(s) | 288, 362, 735, 781 |
| MhlI | GDGCHC | 2 cut(s) | 166, 546 |
| MluCI | AATT | 8 cut(s) | 101, 201, 251, 327, 387, 453, 734, 784 |
| MlyI | GAGTC | 1 cut(s) | 479 |
| MmeI | TCCRAC | 1 cut(s) | 512 |
| MnlI | CCTC | 5 cut(s) | 36, 203, 505, 548, 760 |
| MroXI | GAANNNNTTC | 1 cut(s) | 788 |
| MseI | TTAA | 2 cut(s) | 257, 660 |
| MslI | CAYNNNNRTG | 1 cut(s) | 380 |
| MspA1I | CMGCKG | 1 cut(s) | 767 |
| MspR9I | CCNGG | 2 cut(s) | 207, 475 |
| MvaI | CCWGG | 2 cut(s) | 207, 475 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 440, 645 |
| NlaIII | CATG | 4 cut(s) | 184, 427, 617, 784 |
| NmeAIII | GCCGAG | 1 cut(s) | 688 |
| NmuCI | GTSAC | 1 cut(s) | 336 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 308 |
| PdmI | GAANNNNTTC | 1 cut(s) | 788 |
| PfeI | GAWTC | 3 cut(s) | 91, 484, 515 |
| PfoI | TCCNGGA | 2 cut(s) | 205, 473 |
| PkrI | GCNGC | 3 cut(s) | 190, 766, 769 |
| PleI | GAGTC | 1 cut(s) | 478 |
| PpsI | GAGTC | 1 cut(s) | 478 |
| Psp1406I | AACGTT | 1 cut(s) | 311 |
| Psp6I | CCWGG | 2 cut(s) | 205, 473 |
| PspGI | CCWGG | 2 cut(s) | 205, 473 |
| PstI | CTGCAG | 1 cut(s) | 193 |
| RseI | CAYNNNNRTG | 1 cut(s) | 380 |
| SaqAI | TTAA | 2 cut(s) | 257, 660 |
| SatI | GCNGC | 3 cut(s) | 189, 765, 768 |
| SchI | GAGTC | 1 cut(s) | 479 |
| ScrFI | CCNGG | 2 cut(s) | 207, 475 |
| SduI | GDGCHC | 2 cut(s) | 166, 546 |
| SetI | ASST | 9 cut(s) | 28, 163, 314, 320, 338, 343, 650, 667, 752 |
| SfaNI | GCATC | 1 cut(s) | 268 |
| SfcI | CTRYAG | 2 cut(s) | 189, 649 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 380 |
| Sse9I | AATT | 8 cut(s) | 101, 201, 251, 327, 387, 453, 734, 784 |
| SsiI | CCGC | 2 cut(s) | 762, 765 |
| StyD4I | CCNGG | 2 cut(s) | 205, 473 |
| StyI | CCWWGG | 1 cut(s) | 71 |
| TaaI | ACNGT | 3 cut(s) | 98, 154, 548 |
| TaiI | ACGT | 4 cut(s) | 314, 320, 338, 343 |
| TaqI | TCGA | 3 cut(s) | 243, 324, 518 |
| TasI | AATT | 8 cut(s) | 101, 201, 251, 327, 387, 453, 734, 784 |
| TauI | GCSGC | 1 cut(s) | 767 |
| TfiI | GAWTC | 3 cut(s) | 91, 484, 515 |
| Tru1I | TTAA | 2 cut(s) | 257, 660 |
| Tru9I | TTAA | 2 cut(s) | 257, 660 |
| TscAI | CASTG | 2 cut(s) | 103, 157 |
| TseFI | GTSAC | 1 cut(s) | 336 |
| TseI | GCWGC | 2 cut(s) | 188, 767 |
| Tsp45I | GTSAC | 1 cut(s) | 336 |
| TspDTI | ATGAA | 4 cut(s) | 143, 229, 261, 797 |
| TspRI | CASTG | 2 cut(s) | 103, 157 |
| XapI | RAATTY | 2 cut(s) | 327, 784 |
| XmnI | GAANNNNTTC | 1 cut(s) | 788 |